메뉴 건너뛰기




Volumn 29, Issue 2, 2008, Pages 299-305

RNA-based mutation analysis identifies an unusual MSH6 splicing defect and circumvents PMS2 pseudogene interference

Author keywords

HNPCC; Mismatch repair deficiency; MSH6; NF1; PMS2; PMS2CL; Pseudogene; Splicing mutation

Indexed keywords

MISMATCH REPAIR PROTEIN PMS2; PROTEIN MLH1; PROTEIN MSH2; PROTEIN MSH6; RNA; ADENOSINE TRIPHOSPHATASE; DNA BINDING PROTEIN; G T MISMATCH BINDING PROTEIN; G-T MISMATCH-BINDING PROTEIN; MESSENGER RNA; PMS2 PROTEIN, HUMAN; POLYDEOXYRIBONUCLEOTIDE SYNTHASE; UNCLASSIFIED DRUG;

EID: 38949127061     PISSN: 10597794     EISSN: None     Source Type: Journal    
DOI: 10.1002/humu.20657     Document Type: Article
Times cited : (67)

References (50)
  • 1
    • 0035159678 scopus 로고    scopus 로고
    • Mutation screening at the RNA level of the STK11/LKB1 gene in Peutz-Jeghers syndrome reveals complex splicing abnormalities and a novel mRNA isoform (STK11 c.597 (insertion mark)598insIVS4)
    • Abed AA, Gunther K, Kraus C, Hohenberger W, Ballhausen WG. 2001. Mutation screening at the RNA level of the STK11/LKB1 gene in Peutz-Jeghers syndrome reveals complex splicing abnormalities and a novel mRNA isoform (STK11 c.597 (insertion mark)598insIVS4). Hum Mutat 18:397-410.
    • (2001) Hum Mutat , vol.18 , pp. 397-410
    • Abed, A.A.1    Gunther, K.2    Kraus, C.3    Hohenberger, W.4    Ballhausen, W.G.5
  • 3
    • 0030746291 scopus 로고    scopus 로고
    • Inhibition of nonsense-mediated messenger RNA decay in clinical samples facilitates detection of human MSH2 mutations with an in vivo fusion protein assay and conventional techniques
    • Andreutti-Zaugg C, Scott RJ, Iggo R. 1997. Inhibition of nonsense-mediated messenger RNA decay in clinical samples facilitates detection of human MSH2 mutations with an in vivo fusion protein assay and conventional techniques. Cancer Res 57:3288-3293.
    • (1997) Cancer Res , vol.57 , pp. 3288-3293
    • Andreutti-Zaugg, C.1    Scott, R.J.2    Iggo, R.3
  • 6
    • 29144462041 scopus 로고    scopus 로고
    • Syndrome of early onset colon cancers, hematologic malignancies and features of neurofibromatosis in HNPCC families with homozygous mismatch repair gene mutations
    • Bandipalliam P. 2005. Syndrome of early onset colon cancers, hematologic malignancies and features of neurofibromatosis in HNPCC families with homozygous mismatch repair gene mutations. Fam Cancer 4:323-333.
    • (2005) Fam Cancer , vol.4 , pp. 323-333
    • Bandipalliam, P.1
  • 7
    • 0033021719 scopus 로고    scopus 로고
    • Reliable and sensitive detection of premature termination mutations using a protein truncation test designed to overcome problems of nonsense-mediated mRNA instability
    • Bateman JF, Freddi S, Lamande SR, Byers P Nasioulas S, Douglas J, Otway R, Kohonen-Corish M, Edkins E, Forrest S. 1999. Reliable and sensitive detection of premature termination mutations using a protein truncation test designed to overcome problems of nonsense-mediated mRNA instability. Hum Mutat 13:311-317.
    • (1999) Hum Mutat , vol.13 , pp. 311-317
    • Bateman, J.F.1    Freddi, S.2    Lamande, S.R.3    Byers, P.4    Nasioulas, S.5    Douglas, J.6    Otway, R.7    Kohonen-Corish, M.8    Edkins, E.9    Forrest, S.10
  • 9
    • 0032534069 scopus 로고    scopus 로고
    • A National Cancer Institute Workshop on microsatellite instability for cancer detection and familial predisposition: Development of international criteria for the determination of microsatellite instability in colorectal cancer
    • Boland CR, Thibodeau SN, Hamilton SR, Sidransky D, Eshleman JR, Burt RW, Meltzer SJ, Rodriguez-Bigas MA, Fodde R, Ranzani GN, Srivastava S. 1998. A National Cancer Institute Workshop on microsatellite instability for cancer detection and familial predisposition: development of international criteria for the determination of microsatellite instability in colorectal cancer. Cancer Res 58:5248-5257.
    • (1998) Cancer Res , vol.58 , pp. 5248-5257
    • Boland, C.R.1    Thibodeau, S.N.2    Hamilton, S.R.3    Sidransky, D.4    Eshleman, J.R.5    Burt, R.W.6    Meltzer, S.J.7    Rodriguez-Bigas, M.A.8    Fodde, R.9    Ranzani, G.N.10    Srivastava, S.11
  • 12
    • 25444522500 scopus 로고    scopus 로고
    • Intrachromosomal serial replication slippage in trans gives rise to diverse genomic rearrangements involving inversions
    • Chen JM, Chuzhanova N, Stenson PD, Ferec C, Cooper DN. 2005. Intrachromosomal serial replication slippage in trans gives rise to diverse genomic rearrangements involving inversions. Hum Mutat 26:362-373.
    • (2005) Hum Mutat , vol.26 , pp. 362-373
    • Chen, J.M.1    Chuzhanova, N.2    Stenson, P.D.3    Ferec, C.4    Cooper, D.N.5
  • 14
    • 2342506542 scopus 로고    scopus 로고
    • Novel PMS2 pseudogenes can conceal recessive mutations causing a distinctive childhood cancer syndrome
    • De Vos M, Hayward BE, Picton S, Sheridan E, Bonthron DT. 2004. Novel PMS2 pseudogenes can conceal recessive mutations causing a distinctive childhood cancer syndrome. Am J Hum Genet 74:954-964.
    • (2004) Am J Hum Genet , vol.74 , pp. 954-964
    • De Vos, M.1    Hayward, B.E.2    Picton, S.3    Sheridan, E.4    Bonthron, D.T.5
  • 15
    • 23844494113 scopus 로고    scopus 로고
    • Phenotype associated with recessively inherited mutations in DNA mismatch repair (MMR) genes
    • De Vos M, Hayward B, Bonthron DT, Sheridan E. 2005. Phenotype associated with recessively inherited mutations in DNA mismatch repair (MMR) genes. Biochem Soc Trans 33:718-720.
    • (2005) Biochem Soc Trans , vol.33 , pp. 718-720
    • De Vos, M.1    Hayward, B.2    Bonthron, D.T.3    Sheridan, E.4
  • 16
    • 34249723181 scopus 로고    scopus 로고
    • Constitutive deficiency in DNA mismatch repair
    • Felton KE, Gilchrist DM, Andrew SE. 2007. Constitutive deficiency in DNA mismatch repair. Clin Genet 71:483-498.
    • (2007) Clin Genet , vol.71 , pp. 483-498
    • Felton, K.E.1    Gilchrist, D.M.2    Andrew, S.E.3
  • 22
    • 0028080973 scopus 로고
    • Cloning, characterization and chromosomal assignment of the human genes homologous to yeast PMS1, a member of mismatch repair genes
    • Horii A, Han HJ, Sasaki S, Shimada M, Nakamura Y. 1994. Cloning, characterization and chromosomal assignment of the human genes homologous to yeast PMS1, a member of mismatch repair genes. Biochem Biophys Res Commun 204:1257-1264.
    • (1994) Biochem Biophys Res Commun , vol.204 , pp. 1257-1264
    • Horii, A.1    Han, H.J.2    Sasaki, S.3    Shimada, M.4    Nakamura, Y.5
  • 25
    • 0022617302 scopus 로고
    • Clinical and cytogenetic correlations in 63 patients with therapy-related myelodysplastic syndromes and acute nonlymphocytic leukemia: Further evidence for characteristic abnormalities of chromosomes no 5. and 7
    • Le Beau MM, Albain KS, Larson RA, Vardiman JW, Davis EM, Blough RR, Golomb HM, Rowley JD. 1986. Clinical and cytogenetic correlations in 63 patients with therapy-related myelodysplastic syndromes and acute nonlymphocytic leukemia: further evidence for characteristic abnormalities of chromosomes no 5. and 7. J Clin Oncol 4:325-345.
    • (1986) J Clin Oncol , vol.4 , pp. 325-345
    • Le Beau, M.M.1    Albain, K.S.2    Larson, R.A.3    Vardiman, J.W.4    Davis, E.M.5    Blough, R.R.6    Golomb, H.M.7    Rowley, J.D.8
  • 27
    • 0029330286 scopus 로고
    • When cells stop making sense: Effects of nonsense codons on RNA metabolism in vertebrate cells
    • Maquat L. 1995. When cells stop making sense: effects of nonsense codons on RNA metabolism in vertebrate cells. RNA 1:453-465.
    • (1995) RNA , vol.1 , pp. 453-465
    • Maquat, L.1
  • 28
    • 0036187460 scopus 로고    scopus 로고
    • Loss of DNA mismatch repair proteins in skin tumors from patients with Muir-Torre syndrome and MSH2 or MLH1 germline mutations: Establishment of immunohistochemical analysis as a screening test
    • Mathiak M, Rutten A, Mangold E, Fischer HP Ruzicka T, Friedl W, Propping P, Kruse R. 2002. Loss of DNA mismatch repair proteins in skin tumors from patients with Muir-Torre syndrome and MSH2 or MLH1 germline mutations: establishment of immunohistochemical analysis as a screening test. Am J Surg Pathol 26:338-343.
    • (2002) Am J Surg Pathol , vol.26 , pp. 338-343
    • Mathiak, M.1    Rutten, A.2    Mangold, E.3    Fischer, H.P.4    Ruzicka, T.5    Friedl, W.6    Propping, P.7    Kruse, R.8
  • 29
    • 16544395180 scopus 로고    scopus 로고
    • A homozygous MSH6 mutation in a child with cafe-au-lait spots, oligodendroglioma and rectal cancer
    • Menko FH, Kaspers GL, Meijer GA, Claes K, van Hagen JM, Gille JJ. 2004. A homozygous MSH6 mutation in a child with cafe-au-lait spots, oligodendroglioma and rectal cancer. Fam Cancer 3:123-127.
    • (2004) Fam Cancer , vol.3 , pp. 123-127
    • Menko, F.H.1    Kaspers, G.L.2    Meijer, G.A.3    Claes, K.4    van Hagen, J.M.5    Gille, J.J.6
  • 30
    • 0034081412 scopus 로고    scopus 로고
    • Exhaustive mutation analysis of the NF1 gene allows identification of 95% of mutations and reveals a high frequency of unusual splicing defects
    • Messiaen LM, Callens T, Mortier G, Beysen D, Vandenbroucke I, Van Roy N, Speleman F, Paepe AD. 2000. Exhaustive mutation analysis of the NF1 gene allows identification of 95% of mutations and reveals a high frequency of unusual splicing defects. Hum Mutat 15:541-555.
    • (2000) Hum Mutat , vol.15 , pp. 541-555
    • Messiaen, L.M.1    Callens, T.2    Mortier, G.3    Beysen, D.4    Vandenbroucke, I.5    Van Roy, N.6    Speleman, F.7    Paepe, A.D.8
  • 34
    • 33644892563 scopus 로고    scopus 로고
    • Neurofibromatosis von Recklinghausen type I phenotype and early onset of cancers in siblings compound heterozygous for mutations in MSH6
    • Ostergaard JR, Sunde L, Okkels H. 2005. Neurofibromatosis von Recklinghausen type I phenotype and early onset of cancers in siblings compound heterozygous for mutations in MSH6. Am J Med Genet A 139:96-105.
    • (2005) Am J Med Genet A , vol.139 , pp. 96-105
    • Ostergaard, J.R.1    Sunde, L.2    Okkels, H.3
  • 36
    • 0035054387 scopus 로고    scopus 로고
    • Deficient DNA mismatch repair: A common etiologic factor for colon cancer
    • Peltomaki P. 2001. Deficient DNA mismatch repair: a common etiologic factor for colon cancer. Hum Mol Genet 10:735-740.
    • (2001) Hum Mol Genet , vol.10 , pp. 735-740
    • Peltomaki, P.1
  • 39
    • 0019445309 scopus 로고
    • Nonrandom chromosome abnormalities in acute leukemia and dysmyelopoietic syndromes in patients with previously treated malignant disease
    • Rowley JD, Golomb HM, Vardiman JW 1981. Nonrandom chromosome abnormalities in acute leukemia and dysmyelopoietic syndromes in patients with previously treated malignant disease. Blood 58:759-767.
    • (1981) Blood , vol.58 , pp. 759-767
    • Rowley, J.D.1    Golomb, H.M.2    Vardiman, J.W.3
  • 41
  • 42
    • 16644372812 scopus 로고    scopus 로고
    • RNA analysis reveals splicing mutations and loss of expression defects in MLH1 and BRCA1
    • Sharp A, Pichert G, Lucassen A, Eccles D. 2004. RNA analysis reveals splicing mutations and loss of expression defects in MLH1 and BRCA1. Hum Mutat 24:272.
    • (2004) Hum Mutat , vol.24 , pp. 272
    • Sharp, A.1    Pichert, G.2    Lucassen, A.3    Eccles, D.4
  • 43
    • 0038305924 scopus 로고    scopus 로고
    • Clinical-cytogenetic associations in 306 patients with therapy-related myelodysplasia and myeloid leukemia: The University of Chicago series
    • Smith SM, Le Beau MM, Huo D, Karrison T, Sobecks RM, Anastasi J, Vardiman JW, Rowley JD, Larson RA. 2003. Clinical-cytogenetic associations in 306 patients with therapy-related myelodysplasia and myeloid leukemia: the University of Chicago series. Blood 102:43-52.
    • (2003) Blood , vol.102 , pp. 43-52
    • Smith, S.M.1    Le Beau, M.M.2    Huo, D.3    Karrison, T.4    Sobecks, R.M.5    Anastasi, J.6    Vardiman, J.W.7    Rowley, J.D.8    Larson, R.A.9
  • 47
    • 0034112646 scopus 로고    scopus 로고
    • Illegitimate splicing of the NF1 gene in healthy individuals mimics mutation-induced splicing alterations in NF1 patients
    • Wimmer K, Eckart M, Rehder H, Fonatsch C. 2000. Illegitimate splicing of the NF1 gene in healthy individuals mimics mutation-induced splicing alterations in NF1 patients. Hum Genet 106:311-313.
    • (2000) Hum Genet , vol.106 , pp. 311-313
    • Wimmer, K.1    Eckart, M.2    Rehder, H.3    Fonatsch, C.4
  • 48
    • 34248338233 scopus 로고    scopus 로고
    • Extensive in silico analysis of NF1 splicing defects uncovers determinants for splicing outcome upon 5′ splice-site disruption
    • Wimmer K, Roca X, Beiglbock H, Callens T, Etzler J, Rao AR, Krainer AR, Fonatsch C, Messiaen L. 2007. Extensive in silico analysis of NF1 splicing defects uncovers determinants for splicing outcome upon 5′ splice-site disruption. Hum Mutat 28:599-612.
    • (2007) Hum Mutat , vol.28 , pp. 599-612
    • Wimmer, K.1    Roca, X.2    Beiglbock, H.3    Callens, T.4    Etzler, J.5    Rao, A.R.6    Krainer, A.R.7    Fonatsch, C.8    Messiaen, L.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.