메뉴 건너뛰기




Volumn 190, Issue 4, 2008, Pages 1298-1307

Genetics for Pseudoalteromonas provides tools to manipulate marine bacterial virus PM2

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED DNA; STRUCTURAL PROTEIN; STRUCTURAL PROTEIN P10; TRANSFER RNA; UNCLASSIFIED DRUG;

EID: 38949096838     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.01639-07     Document Type: Article
Times cited : (18)

References (48)
  • 2
    • 33747079278 scopus 로고    scopus 로고
    • Abrescia, N. G., H. M. Kivelä, J. M. Grimes, J. K. Bamford, D. H. Bamford, and D. I. Stuart. 2005. Preliminary crystallographic analysis of the major capsid protein P2 of the lipid-containing bacteriophage PM2. Acta Crystallogr. F 61:762-765.
    • Abrescia, N. G., H. M. Kivelä, J. M. Grimes, J. K. Bamford, D. H. Bamford, and D. I. Stuart. 2005. Preliminary crystallographic analysis of the major capsid protein P2 of the lipid-containing bacteriophage PM2. Acta Crystallogr. F 61:762-765.
  • 3
    • 34250007704 scopus 로고    scopus 로고
    • Lipid-containing bacteriophage PM2, the type organism of Corticoviridae
    • R. Calender ed, Oxford University Press, Oxford, United Kingdom
    • Bamford, D. H., and J. K. H. Bamford. 2006. Lipid-containing bacteriophage PM2, the type organism of Corticoviridae, p. 171-174. In R. Calender (ed.), The bacteriophages. Oxford University Press, Oxford, United Kingdom.
    • (2006) The bacteriophages , pp. 171-174
    • Bamford, D.H.1    Bamford, J.K.H.2
  • 4
    • 0025778670 scopus 로고
    • Construction and properties of a family of pACYC184-derived cloning vectors compatible with pBR322 and its derivatives
    • Bartolome, B., Y. Jubete, E. Martinez, and F. de la Cruz. 1991. Construction and properties of a family of pACYC184-derived cloning vectors compatible with pBR322 and its derivatives. Gene 102:75-78.
    • (1991) Gene , vol.102 , pp. 75-78
    • Bartolome, B.1    Jubete, Y.2    Martinez, E.3    de la Cruz, F.4
  • 5
    • 9744228738 scopus 로고    scopus 로고
    • Does common architecture reveal a viral lineage spanning all three domains of life?
    • Benson, S. D., J. K. Bamford, D. H. Bamford, and R. M. Burnett. 2004. Does common architecture reveal a viral lineage spanning all three domains of life? Mol. Cell 16:673-685.
    • (2004) Mol. Cell , vol.16 , pp. 673-685
    • Benson, S.D.1    Bamford, J.K.2    Bamford, D.H.3    Burnett, R.M.4
  • 6
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
    • (1976) Anal. Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 7
    • 0040874476 scopus 로고
    • Genetic recombination and complementation between bacteriophage T7 and cloned fragments of T7 DNA
    • Campbell, J. L., C. C. Richardson, and F. W. Studier. 1978. Genetic recombination and complementation between bacteriophage T7 and cloned fragments of T7 DNA. Proc. Natl. Acad. Sci. USA 75:2276-2280.
    • (1978) Proc. Natl. Acad. Sci. USA , vol.75 , pp. 2276-2280
    • Campbell, J.L.1    Richardson, C.C.2    Studier, F.W.3
  • 9
    • 0037381269 scopus 로고    scopus 로고
    • The structural biology of type I viral membrane fusion
    • Colman, P. M., and M. C. Lawrence. 2003. The structural biology of type I viral membrane fusion. Nat. Rev. Mol. Cell Biol. 4:309-319.
    • (2003) Nat. Rev. Mol. Cell Biol , vol.4 , pp. 309-319
    • Colman, P.M.1    Lawrence, M.C.2
  • 10
    • 0030755555 scopus 로고    scopus 로고
    • Changes in host cell energetics in response to bacteriophage PRD1 DNA entry
    • Daugelavièius, R., J. K. H. Bamford, and D. H. Bamford. 1997. Changes in host cell energetics in response to bacteriophage PRD1 DNA entry. J. Bacteriol. 179:5203-5210.
    • (1997) J. Bacteriol , vol.179 , pp. 5203-5210
    • Daugelavièius, R.1    Bamford, J.K.H.2    Bamford, D.H.3
  • 12
    • 16544384962 scopus 로고    scopus 로고
    • Promoters from a cold-adapted bacterium: Definition of a consensus motif and molecular characterization of UP regulative elements
    • Duilio, A., S. Madonna, M. L. Tutino, M. Pirozzi, G. Sannia, and G. Marino. 2004. Promoters from a cold-adapted bacterium: definition of a consensus motif and molecular characterization of UP regulative elements. Extremophiles 8:125-132.
    • (2004) Extremophiles , vol.8 , pp. 125-132
    • Duilio, A.1    Madonna, S.2    Tutino, M.L.3    Pirozzi, M.4    Sannia, G.5    Marino, G.6
  • 13
    • 0014284555 scopus 로고
    • Properties and characterization of the host bacterium of bacteriophage PM2
    • Espejo, R. T., and E. S. Canelo. 1968. Properties and characterization of the host bacterium of bacteriophage PM2. J. Bacteriol. 95:1887-1891.
    • (1968) J. Bacteriol , vol.95 , pp. 1887-1891
    • Espejo, R.T.1    Canelo, E.S.2
  • 14
    • 0014275022 scopus 로고
    • Properties of bacteriophage PM2: A lipid-containing bacterial virus
    • Espejo, R. T., and E. S. Canelo. 1968. Properties of bacteriophage PM2: a lipid-containing bacterial virus. Virology 34:738-747.
    • (1968) Virology , vol.34 , pp. 738-747
    • Espejo, R.T.1    Canelo, E.S.2
  • 15
    • 0014552009 scopus 로고
    • DNA of bacteriophage PM2: A closed circular double-stranded molecule
    • Espejo, R. T., E. S. Canelo, and R. L. Sinsheimer. 1969. DNA of bacteriophage PM2: a closed circular double-stranded molecule. Proc. Natl. Acad. Sci. USA 63:1164-1168.
    • (1969) Proc. Natl. Acad. Sci. USA , vol.63 , pp. 1164-1168
    • Espejo, R.T.1    Canelo, E.S.2    Sinsheimer, R.L.3
  • 16
    • 0028799334 scopus 로고
    • Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations
    • Gauthier, G., M. Gauthier, and R. Christen. 1995. Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations. Int. J. Syst. Bacteriol. 45:755-761.
    • (1995) Int. J. Syst. Bacteriol , vol.45 , pp. 755-761
    • Gauthier, G.1    Gauthier, M.2    Christen, R.3
  • 17
    • 0036887159 scopus 로고    scopus 로고
    • Grahn, A., M., R. Daugelavièius, and D. H. Bamford. 2002. Sequential model of phage PRD1 DNA delivery: active involvement of the viral membrane. Mol. Microbiol. 46:1199-1209.
    • Grahn, A., M., R. Daugelavièius, and D. H. Bamford. 2002. Sequential model of phage PRD1 DNA delivery: active involvement of the viral membrane. Mol. Microbiol. 46:1199-1209.
  • 18
    • 34147109315 scopus 로고    scopus 로고
    • Membrane-containing viruses with icosahedrally symmetric capsids
    • Huiskonen, J. T., and S. J. Butcher. 2007. Membrane-containing viruses with icosahedrally symmetric capsids. Curr. Opin. Struct. Biol. 17:229-236.
    • (2007) Curr. Opin. Struct. Biol , vol.17 , pp. 229-236
    • Huiskonen, J.T.1    Butcher, S.J.2
  • 19
    • 4344559453 scopus 로고    scopus 로고
    • The PM2 virion has a novel organization with an internal membrane and pentameric receptor binding spikes
    • Huiskonen, J. T., H. M. Kivelä, D. H. Bamford, and S. J. Butcher. 2004. The PM2 virion has a novel organization with an internal membrane and pentameric receptor binding spikes. Nat. Struct. Mol. Biol. 11:850-856.
    • (2004) Nat. Struct. Mol. Biol , vol.11 , pp. 850-856
    • Huiskonen, J.T.1    Kivelä, H.M.2    Bamford, D.H.3    Butcher, S.J.4
  • 20
    • 34147123766 scopus 로고    scopus 로고
    • DNA packaging and delivery machines in tailed bacteriophages
    • Johnson, J. E., and W. Chiu. 2007. DNA packaging and delivery machines in tailed bacteriophages. Curr. Opin. Struct. Biol. 17:237-243.
    • (2007) Curr. Opin. Struct. Biol , vol.17 , pp. 237-243
    • Johnson, J.E.1    Chiu, W.2
  • 21
    • 30044450170 scopus 로고    scopus 로고
    • Structure of an archaeal virus capsid protein reveals a common ancestry to eukaryotic and bacterial viruses
    • Khayat, R., L. Tang, E. T. Larson, C. M. Lawrence, M. Young, and J. E. Johnson. 2005. Structure of an archaeal virus capsid protein reveals a common ancestry to eukaryotic and bacterial viruses. Proc. Natl. Acad. Sci. USA 102:18944-18949.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 18944-18949
    • Khayat, R.1    Tang, L.2    Larson, E.T.3    Lawrence, C.M.4    Young, M.5    Johnson, J.E.6
  • 22
    • 31344432402 scopus 로고    scopus 로고
    • Virus membrane-fusion proteins: More than one way to make a hairpin
    • Kielian, M., and F. A. Rey. 2006. Virus membrane-fusion proteins: more than one way to make a hairpin. Nat. Rev. Microbiol. 4:67-76.
    • (2006) Nat. Rev. Microbiol , vol.4 , pp. 67-76
    • Kielian, M.1    Rey, F.A.2
  • 23
    • 3843084996 scopus 로고    scopus 로고
    • Penetration of membrane-containing double-stranded-DNA bacteriophage PM2 into Pseudoalteromonas hosts
    • Kivelä, H. M., R. Daugelavièius, R. H. Hankkio, J. K. Bamford, and D. H. Bamford. 2004. Penetration of membrane-containing double-stranded-DNA bacteriophage PM2 into Pseudoalteromonas hosts. J. Bacteriol. 186:5342-5354.
    • (2004) J. Bacteriol , vol.186 , pp. 5342-5354
    • Kivelä, H.M.1    Daugelavièius, R.2    Hankkio, R.H.3    Bamford, J.K.4    Bamford, D.H.5
  • 24
    • 0036319176 scopus 로고    scopus 로고
    • Bacteriophage PM2 has a protein capsid surrounding a spherical proteinaceous lipid core
    • Kivelä, H. M., N. Kalkkinen, and D. H. Bamford. 2002. Bacteriophage PM2 has a protein capsid surrounding a spherical proteinaceous lipid core. J. Virol. 76:8169-8178.
    • (2002) J. Virol , vol.76 , pp. 8169-8178
    • Kivelä, H.M.1    Kalkkinen, N.2    Bamford, D.H.3
  • 25
    • 0344761956 scopus 로고    scopus 로고
    • Purification and protein composition of PM2, the first lipid-containing bacterial virus to be isolated
    • Kivelä, H. M., R. H. Männistö, N. Kalkkinen, and D. H. Bamford. 1999. Purification and protein composition of PM2, the first lipid-containing bacterial virus to be isolated. Virology 262:364-374.
    • (1999) Virology , vol.262 , pp. 364-374
    • Kivelä, H.M.1    Männistö, R.H.2    Kalkkinen, N.3    Bamford, D.H.4
  • 26
    • 0025331936 scopus 로고
    • Construction of Escherichia coli amber suppressor tRNA genes. II. Synthesis of additional tRNA genes and improvement of suppressor efficiency
    • Kleina, L. G., J. M. Masson, J. Normanly, J. Abelson, and J. H. Miller. 1990. Construction of Escherichia coli amber suppressor tRNA genes. II. Synthesis of additional tRNA genes and improvement of suppressor efficiency. J. Mol. Biol. 213:705-717.
    • (1990) J. Mol. Biol , vol.213 , pp. 705-717
    • Kleina, L.G.1    Masson, J.M.2    Normanly, J.3    Abelson, J.4    Miller, J.H.5
  • 27
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
    • Krogh, A., B. Larsson, G. von Heijne, and L. L. Sonnhammer. 2001. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J. Mol. Biol. 305:567-580.
    • (2001) J. Mol. Biol , vol.305 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    von Heijne, G.3    Sonnhammer, L.L.4
  • 28
    • 34548187473 scopus 로고    scopus 로고
    • Putative prophages related to lytic tailless marine dsDNA phage PM2 are widespread in the genomes of aquatic bacteria
    • Krupoviè, M., and D. H. Bamford. 2007. Putative prophages related to lytic tailless marine dsDNA phage PM2 are widespread in the genomes of aquatic bacteria. BMC Genom. 8:236.
    • (2007) BMC Genom , vol.8 , pp. 236
    • Krupoviè, M.1    Bamford, D.H.2
  • 29
    • 34249993104 scopus 로고    scopus 로고
    • A novel lysis system in PM2, a lipid-containing marine double-stranded DNA bacteriophage
    • Krupoviè, M., R. Daugelavièius, and D. H. Bamford. 2007. A novel lysis system in PM2, a lipid-containing marine double-stranded DNA bacteriophage. Mol. Microbiol. 64:1635-1648.
    • (2007) Mol. Microbiol , vol.64 , pp. 1635-1648
    • Krupoviè, M.1    Daugelavièius, R.2    Bamford, D.H.3
  • 30
    • 33748498458 scopus 로고    scopus 로고
    • Genome characterization of lipid-containing marine bacteriophage PM2 by transposon insertion mutagenesis
    • Krupoviè, M., H. Vilen, J. K. H. Bamford, H. M. Kivelä, J. M. Aalto, H. Savilahti, and D. H. Bamford. 2006. Genome characterization of lipid-containing marine bacteriophage PM2 by transposon insertion mutagenesis. J. Virol. 80:9270-9278.
    • (2006) J. Virol , vol.80 , pp. 9270-9278
    • Krupoviè, M.1    Vilen, H.2    Bamford, J.K.H.3    Kivelä, H.M.4    Aalto, J.M.5    Savilahti, H.6    Bamford, D.H.7
  • 31
    • 35148845552 scopus 로고    scopus 로고
    • Transbilayer distribution of phospholipids in bacteriophage membranes
    • Laurinavièius, S., D. H. Bamford, and P. Somerharju. 2007. Transbilayer distribution of phospholipids in bacteriophage membranes. Biochim. Biophys. Acta 1768:2568-2577.
    • (2007) Biochim. Biophys. Acta , vol.1768 , pp. 2568-2577
    • Laurinavièius, S.1    Bamford, D.H.2    Somerharju, P.3
  • 32
    • 27944481316 scopus 로고    scopus 로고
    • Membrane proteins modulate the bilayer curvature in the bacterial virus Bam35
    • Laurinmäki, P. A., J. T. Huiskonen, D. H. Bamford, and S. J. Butcher. 2005. Membrane proteins modulate the bilayer curvature in the bacterial virus Bam35. Structure 13:1819-1828.
    • (2005) Structure , vol.13 , pp. 1819-1828
    • Laurinmäki, P.A.1    Huiskonen, J.T.2    Bamford, D.H.3    Butcher, S.J.4
  • 33
    • 0038054290 scopus 로고    scopus 로고
    • Channeling phage DNA through membranes: From in vivo to in vitro
    • Letellier, L., P. Boulanger, M. de Frutos, and P. Jacquot. 2003. Channeling phage DNA through membranes: from in vivo to in vitro. Res. Microbiol. 154:283-287.
    • (2003) Res. Microbiol , vol.154 , pp. 283-287
    • Letellier, L.1    Boulanger, P.2    de Frutos, M.3    Jacquot, P.4
  • 35
    • 0345672731 scopus 로고    scopus 로고
    • The complete genome sequence of PM2, the first lipid-containing bacterial virus to be isolated
    • Männistö, R. H., H. M. Kivelä, L. Paulin, D. H. Bamford, and J. K. H. Bamford. 1999. The complete genome sequence of PM2, the first lipid-containing bacterial virus to be isolated. Virology 262:355-363.
    • (1999) Virology , vol.262 , pp. 355-363
    • Männistö, R.H.1    Kivelä, H.M.2    Paulin, L.3    Bamford, D.H.4    Bamford, J.K.H.5
  • 36
    • 0020469038 scopus 로고
    • Isolation of nonsense mutants of lipid-containing bacteriophage PRD1
    • Mindich, L., D. Bamford, C. Goldthwaite, M. Laverty, and G. Mackenzie. 1982. Isolation of nonsense mutants of lipid-containing bacteriophage PRD1. J. Virol. 44:1013-1020.
    • (1982) J. Virol , vol.44 , pp. 1013-1020
    • Mindich, L.1    Bamford, D.2    Goldthwaite, C.3    Laverty, M.4    Mackenzie, G.5
  • 37
    • 0017227009 scopus 로고
    • Isolation of nonsense suppressor mutants in Pseudomonas
    • Mindich, L., J. Cohen, and M. Weisburd. 1976. Isolation of nonsense suppressor mutants in Pseudomonas. J. Bacteriol. 126:177-182.
    • (1976) J. Bacteriol , vol.126 , pp. 177-182
    • Mindich, L.1    Cohen, J.2    Weisburd, M.3
  • 39
    • 0025337664 scopus 로고
    • Construction of Escherichia coli amber suppressor tRNA genes. III. Determination of tRNA specificity
    • Normanly, J., L. G. Kleina, J. M. Masson, J. Abelson, and J. H. Miller. 1990. Construction of Escherichia coli amber suppressor tRNA genes. III. Determination of tRNA specificity. J. Mol. Biol. 213:719-726.
    • (1990) J. Mol. Biol , vol.213 , pp. 719-726
    • Normanly, J.1    Kleina, L.G.2    Masson, J.M.3    Abelson, J.4    Miller, J.H.5
  • 42
    • 0023472472 scopus 로고
    • Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa
    • Schägger, H., and G. von Jagow. 1987. Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Anal. Biochem. 166:368-379.
    • (1987) Anal. Biochem , vol.166 , pp. 368-379
    • Schägger, H.1    von Jagow, G.2
  • 44
    • 0017371171 scopus 로고
    • Structure and synthesis of a lipid-containing bacteriophage. An endolysin activity associated with bacteriophage PM2
    • Tsukagoshi, N., R. Schäfer, and R. M. Franklin. 1977. Structure and synthesis of a lipid-containing bacteriophage. An endolysin activity associated with bacteriophage PM2. Eur. J. Biochem. 77:585-588.
    • (1977) Eur. J. Biochem , vol.77 , pp. 585-588
    • Tsukagoshi, N.1    Schäfer, R.2    Franklin, R.M.3
  • 45
    • 0034596254 scopus 로고    scopus 로고
    • A rolling-circle plasmid from Psychrobacter sp. TA144: Evidence for a novel rep subfamily
    • Tutino, M. L., A. Duilio, M. A. Moretti, G. Sannia, and G. Marino. 2000. A rolling-circle plasmid from Psychrobacter sp. TA144: evidence for a novel rep subfamily. Biochem. Biophys. Res. Commun. 274:488-495.
    • (2000) Biochem. Biophys. Res. Commun , vol.274 , pp. 488-495
    • Tutino, M.L.1    Duilio, A.2    Moretti, M.A.3    Sannia, G.4    Marino, G.5
  • 46
    • 0035430835 scopus 로고    scopus 로고
    • A novel replication element from an Antarctic plasmid as a tool for the expression of proteins at low temperature
    • Tutino, M. L., A. Duilio, R. Parrilli, E. Remaut, G. Sannia, and G. Marino. 2001. A novel replication element from an Antarctic plasmid as a tool for the expression of proteins at low temperature. Extremophiles 5:257-264.
    • (2001) Extremophiles , vol.5 , pp. 257-264
    • Tutino, M.L.1    Duilio, A.2    Parrilli, R.3    Remaut, E.4    Sannia, G.5    Marino, G.6
  • 47
    • 0014976348 scopus 로고
    • Infection of spheroplasts of Pseudomonas with DNA of bacteriophage PM2
    • van der Schans, G. P., J. P. Weyermans, and J. F. Bleichrodt. 1971. Infection of spheroplasts of Pseudomonas with DNA of bacteriophage PM2. Mol. Gen. Genet. 110:263-271.
    • (1971) Mol. Gen. Genet , vol.110 , pp. 263-271
    • van der Schans, G.P.1    Weyermans, J.P.2    Bleichrodt, J.F.3
  • 48
    • 33846232747 scopus 로고    scopus 로고
    • Optimization of recombinant human nerve growth factor production in the psychrophilic Pseudoalteromonas haloplanktis
    • Vigentini, I., A. Merico, M. L. Tutino, C. Compagno, and G. Marino. 2006. Optimization of recombinant human nerve growth factor production in the psychrophilic Pseudoalteromonas haloplanktis. J. Biotechnol. 127:141-150.
    • (2006) J. Biotechnol , vol.127 , pp. 141-150
    • Vigentini, I.1    Merico, A.2    Tutino, M.L.3    Compagno, C.4    Marino, G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.