메뉴 건너뛰기




Volumn 7, Issue 1, 2008, Pages

Self-Organizing Maps with Statistical Phase Synchronization (SOMPS) for analyzing cell cycle-specific gene expression data

Author keywords

Cell cycle; Gene expression; Phase synchronization; Self organizing map

Indexed keywords

ALGORITHM; ARTICLE; CELL CYCLE; CLUSTER ANALYSIS; GENE EXPRESSION; MULTIVARIATE ANALYSIS; NONHUMAN; SIGNAL TRANSDUCTION; STATISTICAL ANALYSIS; YEAST CELL; FUNGAL GENE; GENETICS; REPRODUCIBILITY; SACCHAROMYCES CEREVISIAE;

EID: 38849174305     PISSN: None     EISSN: 15446115     Source Type: Journal    
DOI: 10.2202/1544-6115.1323     Document Type: Article
Times cited : (1)

References (29)
  • 2
    • 0036221998 scopus 로고    scopus 로고
    • Regulation of flageller assembly
    • Aldridge, P. and Hughes, K. (2002) Regulation of flageller assembly. Curr. Opin. Microbiol. 5, 160-165.
    • (2002) Curr. Opin. Microbiol , vol.5 , pp. 160-165
    • Aldridge, P.1    Hughes, K.2
  • 3
    • 13244294808 scopus 로고    scopus 로고
    • An approach to multivariate phase synchronization analysis and its application to even-related potentials
    • Allefeld, C. and Kurths, J. (2004) An approach to multivariate phase synchronization analysis and its application to even-related potentials. Int. J. Bifurcation and Chaos 14(2), 417-426.
    • (2004) Int. J. Bifurcation and Chaos , vol.14 , Issue.2 , pp. 417-426
    • Allefeld, C.1    Kurths, J.2
  • 5
    • 0035682819 scopus 로고    scopus 로고
    • Reduced degree of long-range phase synchrony in pathological human brain
    • Bhattacharya, J. (2001) Reduced degree of long-range phase synchrony in pathological human brain. Acta Neurobiol. Exp. 61, 309-318.
    • (2001) Acta Neurobiol. Exp , vol.61 , pp. 309-318
    • Bhattacharya, J.1
  • 6
    • 0034710620 scopus 로고    scopus 로고
    • Cyclin transcription: Timing is everything
    • Breeden, L.L. (2000) Cyclin transcription: timing is everything. Curr. Biol. 10, R586-R588.
    • (2000) Curr. Biol , vol.10
    • Breeden, L.L.1
  • 7
    • 0037425623 scopus 로고    scopus 로고
    • Periodic transcription: A cycle within a cycle
    • Breeden, L.L. (2003) Periodic transcription: a cycle within a cycle. Curr. Biol. 13, R31-R38.
    • (2003) Curr. Biol , vol.13
    • Breeden, L.L.1
  • 9
    • 2442555885 scopus 로고    scopus 로고
    • Micorarray analysis of gene expression during the cell cycle
    • Cooper, S. and Shedden, K. (2003) Micorarray analysis of gene expression during the cell cycle. Cell & Chromosome 2, 1.
    • (2003) Cell & Chromosome , vol.2 , pp. 1
    • Cooper, S.1    Shedden, K.2
  • 10
    • 0000293183 scopus 로고
    • Theory of communication
    • Gabor, D. (1946) Theory of communication. J. IEE (London) 93, 429-457.
    • (1946) J. IEE (London) , vol.93 , pp. 429-457
    • Gabor, D.1
  • 11
    • 0004199226 scopus 로고
    • Princeton University Press, Princeton, New Jersey
    • Glass, L. and Mackay, M.C. (1988) From clocks to chaos. Princeton University Press, Princeton, New Jersey.
    • (1988) From clocks to chaos
    • Glass, L.1    Mackay, M.C.2
  • 13
    • 38849089383 scopus 로고    scopus 로고
    • Huygens, Ch. (1673) Horologium Oscillatorium. Apud F. Muguet, Parisiis, France.
    • Huygens, Ch. (1673) Horologium Oscillatorium. Apud F. Muguet, Parisiis, France.
  • 14
    • 0035475907 scopus 로고    scopus 로고
    • Phase synchronization and suppression of chaos through intermittency in forcing of an electrochemical oscillator
    • Kiss, I.Z. and Hudson, J.L. (2001) Phase synchronization and suppression of chaos through intermittency in forcing of an electrochemical oscillator. Phys. Rev. E 64, 6215.
    • (2001) Phys. Rev. E , vol.64 , pp. 6215
    • Kiss, I.Z.1    Hudson, J.L.2
  • 17
    • 0034671792 scopus 로고    scopus 로고
    • Global analysis of the genetic network controlling a bacterial cell cycle
    • Laub, M., McAdams, H.H., Feldblyum, T., Fraser, C.M. and Shapiro, L. (2000) Global analysis of the genetic network controlling a bacterial cell cycle. Science 290, 2144-2148.
    • (2000) Science , vol.290 , pp. 2144-2148
    • Laub, M.1    McAdams, H.H.2    Feldblyum, T.3    Fraser, C.M.4    Shapiro, L.5
  • 19
    • 0034300367 scopus 로고    scopus 로고
    • Mean phase coherence as a measure for phase synchronization and its application to EEG of epilepsy patients
    • Morman, F., Lehnertz, K., David, P. and Elger, C.E. (2000) Mean phase coherence as a measure for phase synchronization and its application to EEG of epilepsy patients. Physica D 144, 358-369.
    • (2000) Physica D , vol.144 , pp. 358-369
    • Morman, F.1    Lehnertz, K.2    David, P.3    Elger, C.E.4
  • 20
    • 0000272882 scopus 로고    scopus 로고
    • Experimental observation of phase synchronization
    • Parlitz, U., Junge, L., Lauterborn, W. and Kocarev, L. (1996) Experimental observation of phase synchronization. Phys. Rev. E 54, 2115-2117.
    • (1996) Phys. Rev. E , vol.54 , pp. 2115-2117
    • Parlitz, U.1    Junge, L.2    Lauterborn, W.3    Kocarev, L.4
  • 21
    • 34250135918 scopus 로고
    • On the interaction of strange attractors
    • Pikovsky, A.S. (1984) On the interaction of strange attractors. Phys. B 55, 149-154.
    • (1984) Phys. B , vol.55 , pp. 149-154
    • Pikovsky, A.S.1
  • 23
    • 0001450027 scopus 로고
    • Generalized redundancies for time series analysis
    • Prichard, D. and Theiler, J. (1995) Generalized redundancies for time series analysis. Physica D 84, 476-493.
    • (1995) Physica D , vol.84 , pp. 476-493
    • Prichard, D.1    Theiler, J.2
  • 24
    • 0035861975 scopus 로고    scopus 로고
    • Beyond synexpression relationships: Local clustering of time-shifted and inverted gene expression profiles identifies new, biologically relevant interactions
    • Qian, J., Dolled-Filhart, M., Lin, J., Yu, H. and Gerstein, M. (2001) Beyond synexpression relationships: local clustering of time-shifted and inverted gene expression profiles identifies new, biologically relevant interactions. J. Mol. Biol. 314, 1053-1066.
    • (2001) J. Mol. Biol , vol.314 , pp. 1053-1066
    • Qian, J.1    Dolled-Filhart, M.2    Lin, J.3    Yu, H.4    Gerstein, M.5
  • 25
    • 4243262725 scopus 로고    scopus 로고
    • Phase synchronization of chaotic oscillators
    • Rosenblum, M., Pikovsky, A., and Kurths, J. (1996) Phase synchronization of chaotic oscillators. Phys. Rev. Lett. 76, 1804-1807.
    • (1996) Phys. Rev. Lett , vol.76 , pp. 1804-1807
    • Rosenblum, M.1    Pikovsky, A.2    Kurths, J.3
  • 26
    • 0036628541 scopus 로고    scopus 로고
    • Analysis of cell-cycle gene expression in Saccharomyces cerevisiae using microarrays and multiple synchronization methods
    • Shedden, K. and Cooper, S. (2002a) Analysis of cell-cycle gene expression in Saccharomyces cerevisiae using microarrays and multiple synchronization methods. Nucleic Acids Res. 30, 2920-2929.
    • (2002) Nucleic Acids Res , vol.30 , pp. 2920-2929
    • Shedden, K.1    Cooper, S.2
  • 27
    • 0037007033 scopus 로고    scopus 로고
    • Analysis of cell cycle-specific gene expression in human cells as determined by microarrays and double-thymidine block synchronization
    • Shedden, K. and Cooper, S. (2002b) Analysis of cell cycle-specific gene expression in human cells as determined by microarrays and double-thymidine block synchronization. Proc. Natl. Acad. Sci. 99, 4379-4384.
    • (2002) Proc. Natl. Acad. Sci , vol.99 , pp. 4379-4384
    • Shedden, K.1    Cooper, S.2
  • 29
    • 20644468608 scopus 로고    scopus 로고
    • Experimental real-time phase synchronization of a speed chaotic plasma discharge
    • Ticos, C.M., Rosa, E., Pardo, W.B., Walkenstein, J. and Monti, M. (2000) Experimental real-time phase synchronization of a speed chaotic plasma discharge. Phys. Rev. Lett. 85, 2929-2932.
    • (2000) Phys. Rev. Lett , vol.85 , pp. 2929-2932
    • Ticos, C.M.1    Rosa, E.2    Pardo, W.B.3    Walkenstein, J.4    Monti, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.