Three new Lasiodiplodia spp. from the tropics, recognized based on DNA sequence comparisons and morphology

Mycologia

Volumn 98, Issue 3, 2006, Pages 423-435

  Burgess, Treena I ^a   Barber, Paul A ^a   Mohali, Sari ^b   Pegg, Geoff ^c   De Beer, Wilhelm ^d   Wingfield, Michael J ^d  

^a MURDOCH UNIVERSITY   (Australia)

^b FACULTAD DE CIENCIAS   (Venezuela)

^c DEPARTMENT OF AGRICULTURE AND FISHERIES   (Australia)

^d UNIVERSITY OF PRETORIA   (South Africa)

Author keywords

Botryosphaeria; Diplodia; Dothiorella; Fusicoccum; ITS; Molecular phylogenetics; Translation elongation factor EF1

Indexed keywords

DNA; ENDOPHYTE; FUNGAL DISEASE; MORPHOLOGY; PHYLOGENETICS; PLANTATION; SUBTROPICAL REGION; TREE; TROPICAL ENVIRONMENT;

AUSTRALASIA; AUSTRALIA; SOUTH AMERICA; VENEZUELA;

BOTRYOSPHAERIA; BOTRYOSPHAERIA RHODINA; DIPLODIA; DOTHIORELLA; FUSICOCCUM; LASIODIPLODIA; LASIODIPLODIA CRASSISPORA; LASIODIPLODIA GONUBIENSIS; LASIODIPLODIA RUBROPURPUREA; LASIODIPLODIA VENEZUELENSIS;

EID: 38749137743     PISSN: 00275514     EISSN: 15572536     Source Type: Journal    
DOI: 10.1080/15572536.2006.11832677     Document Type: Article

References (30)

1. Alves A, Correia A, Luque J, Phillips A. 2004. Botryosphaeria corticola sp. nov. on Quercus species, with notes and description of Botryosphaeria stevensii and its anamorph Diplodia mutila. Mycologia 96:598-613.
2. Burgess T, Wingfield BD, Wingfield MJ. 2001. Comparison of genotypic diversity in native and introduced populations of Sphaeropsis sapinea isolated from Pinus radiata. Mycol Res 105:1331-1339.
3. Carbone I, Kohn LM. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91:553-556.
4. Clendinin L. 1896. Lasiodiplodia Ellis. & Everh. n. gen. The Botanical Gazette XXI:92-93.
5. de Wet J, Burgess T, Slippers B, Presig O, Wingfield BD, Wingfield MJ. 2003. Multiple gene genealogies and microsatellite markers reflect relationships between morphotypes of Sphaeropsis sapinea and identify a new species of Diplodia. Mycol Res 107:557-566.
6. Denman S, Crous PW, Taylor JE, Kang J-C, Pascoe I, Wingfield MJ. 2000. An overview of the taxonomic history of Botryosphaeria, a re-evaluation of its anamorphs based on morphology and ITS rDNA phylogeny. Stud Mycol 45:129-140.
7. Farris JS, Kallersjo M, Kluge AG, Bult C. 1995. Testing significance of incongruence. Cladistics 10:315-319.
8. Felsenstein J. 1985. Confidence intervals on phylogenetics: an approach using bootstrap. Evolution 39:783-791.
9. Flowers E, Hartman J, Vaillancourt L. 2003. Detection of latent Sphaeropsis sapinea infections in Austrian pine tissues using nested-polymerase chain reaction. Phytopath 93:1471-1477.
10. Gardes M, Bruns T. 1993. ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts. Mol Ecol 2:113-118.
11. Hillis DM, Huelsenbeck JP. 1992. Signal, noise and reliability in molecular phylogenetic analysis. J Hered 83:189-195.
12. Huelsenbeck JP, Bull JJ, Cunningham CV. 1996. Combining data in phylogenetic analysis. Trends Ecol Evol 11:152-158.
13. Jacobs KA, Rehner SA. 1998. Comparison of cultural and morphological characters and ITS sequences in anamorphs of Botryosphaeria and related taxa. Mycologia 90:601-610.
14. Luque J, Martos S, Phillips AJL. 2005. Botryosphaeria viticola sp. nov. on grapevines: a new species with a Dothiorella anamorph. Mycologia 97:1111-1121.
15. Mohali S, Burgess TI, Wingfield MJ. 2005. Diversity and host association of the tropical tree endophyte Lasiodiplodia theobromae revealed using SSR markers. For Path 35:385-396.
16. Patouillard N, de Lagerheim G. 1892. Champignons de l'equateur (Pugillus II). Bulletin de la Société Mycologique de France 8:113-140.
17. Pavlic D, Slippers B, Coutinho TA, Gryenhout M, Wingfield MJ. 2004. Lasiodiplodia gonubiensis sp. nov., a new Botryosphaeria anamorph from native Syzygium cordatum in South Africa. Stud Mycol 50:313-322.
18. Phillips A, Alves A, Correia A, Luque J. 2005. Two new species of Botryosphaeria with brown, 1-septate ascospores and Dothiorella anamorphs. Mycologia 97:513-529.
19. Punithalingam E. 1976. Botryodiplodia theobromae. CMI descriptions of pathogenic fungi and bacteria. No. 519. Kew, Surrey, England: Commonwealth Mycological Institute.
20. _. 1980. Plant diseases attributed to Botryodiplodia theobromae Pat. Vadus, Germany: J. Cramer.
21. Rayner RW. 1970. A mycological colour chart. Kew, Surrey, UK: CMI and British Mycological Society.
22. Slippers B, Crous PW, Denman S, Coutinho TA, Wingfield BD, Wingfield MJ. 2004. Combined multiple gene genealogies and phenotypic characters differentiate several species previously identified as Botryosphaeria dothidea. Mycologia 96:83-101.
23. Smith H, Wingfield MJ, Crous PW, Coutinho TA. 1996. Sphaeropsis sapinea and Botryosphaeria dothidea endophytic in Pinus spp. and Eucalyptus spp. in South Africa. S Afric J Bot 62:86-88.
24. Smith RS, Stanosz GR. 2001. Molecular and morphological differentiation of Botryosphaeria dothidea (anamorph Fusicoccum aesculi) from some other fungi with Fusicoccum anamorphs. Mycologia 93:505-515.
25. Swofford DL. 2000. PAUP* 4.0: phylogenetic analysis using parsimony (*and other methods). Sunderland, Massachusetts: Sinauer Associates.
26. van Niekerk JM, Crous PW, Groenewald JZ, Fourie G. 2004. DNA phylogeny, morphology and pathogenicity of Botryosphaeria species on grapevines. Mycologia 96:781-798.
27. von Arx JA. 1974. The genera of fungi sporulating in pure culture. Vaduz, Germany: J. Cramer.
28. _. 1987. Plant Pathogenic Fungi. Berlin, Germany: J. Cramer. 288 p.
29. White TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innes MA, Gelfand DH, Sninsky JJ, White TJ, eds. PCR protocols: a guide to methods and applications. San Diego: Academic Press. p 315-322.
30. Zhou S, Stanosz GR. 2001. Relationships among Botryosphaeria species and associated anamorphic fungi inferred from the analysis of the ITS and 5.8S rDNA sequences. Mycologia 93:516-527.