메뉴 건너뛰기




Volumn 2007, Issue , 2007, Pages

Extraction of protein interaction data: A comparative analysis of methods in use

Author keywords

[No Author keywords available]

Indexed keywords


EID: 38749131568     PISSN: 16874145     EISSN: 16874153     Source Type: Journal    
DOI: 10.1155/2007/53096     Document Type: Article
Times cited : (8)

References (18)
  • 1
    • 33344465511 scopus 로고    scopus 로고
    • Biomedical language processing: What's beyond PubMed?
    • larry.hunter@uchsc.edu
    • L. Hunter larry.hunter@uchsc.edu K. B. Cohen Biomedical language processing: what's beyond PubMed? Molecular Cell 21 5 2006 589 594
    • (2006) Molecular Cell , vol.21 , Issue.5 , pp. 589-594
    • Hunter, L.1    Cohen, K.B.2
  • 4
    • 0002284942 scopus 로고    scopus 로고
    • Identifying the interaction between genes and gene products based on frequently seen verbs in medline abstracts
    • T. Sekimizu H. S. Park J. Tsujii Identifying the interaction between genes and gene products based on frequently seen verbs in medline abstracts. Genome informatics 9 1998 62 71
    • (1998) Genome Informatics , vol.9 , pp. 62-71
    • Sekimizu, T.1    Park, H.S.2    Tsujii, J.3
  • 5
    • 0141515736 scopus 로고    scopus 로고
    • MedScan, a natural language processing engine for Medline abstracts
    • nikolai@ariadnegenomics.com
    • S. Novichkova S. Egorov N. Daraselia nikolai@ariadnegenomics.com MedScan, a natural language processing engine for Medline abstracts. Bioinformatics 19 13 2003 1699 1706
    • (2003) Bioinformatics , vol.19 , Issue.13 , pp. 1699-1706
    • Novichkova, S.1    Egorov, S.2    Daraselia, N.3
  • 8
    • 12344282809 scopus 로고    scopus 로고
    • Discovering patterns to extract protein-protein interactions from full texts
    • zxy-dcs@tsinghua.edu.cn mli@uwaterloo.ca
    • M. Huang X. Zhu zxy-dcs@tsinghua.edu.cn Y. Hao D. G. Payan K. Qu M. Li mli@uwaterloo.ca Discovering patterns to extract protein-protein interactions from full texts. Bioinformatics 20 18 2004 3604 3612
    • (2004) Bioinformatics , vol.20 , Issue.18 , pp. 3604-3612
    • Huang, M.1    Zhu, X.2    Hao, Y.3    Payan, D.G.4    Qu, K.5    Li, M.6
  • 9
    • 20744446607 scopus 로고    scopus 로고
    • Literature mining and database annotation of protein phosphorylation using a rule-based system
    • zh9@georgetown.edu
    • Z. Z. Hu zh9@georgetown.edu M. Narayanaswamy K. E. Ravikumar K. Vijay-Shanker C. H. Wu Literature mining and database annotation of protein phosphorylation using a rule-based system. Bioinformatics 21 11 2005 2759 2765
    • (2005) Bioinformatics , vol.21 , Issue.11 , pp. 2759-2765
    • Hu, Z.Z.1    Narayanaswamy, M.2    Ravikumar, K.E.3    Vijay-Shanker, K.4    Wu, C.H.5
  • 10
    • 0035042776 scopus 로고    scopus 로고
    • A literature network of human genes for high-throughput analysis of gene expression
    • T.-K. Jenssen A. Lgreid J. Komorowski E. Hovig A literature network of human genes for high-throughput analysis of gene expression. Nature Genetics 28 1 2001 21 28
    • (2001) Nature Genetics , vol.28 , Issue.1 , pp. 21-28
    • Jenssen, T.-K.1    Lgreid, A.2    Komorowski, J.3    Hovig, E.4
  • 11
    • 0035236048 scopus 로고    scopus 로고
    • GENIES: A natural-language processing system for the extraction of molecular pathways from journal articles
    • friedman.carol@dmi.columbia.edu
    • C. Friedman friedman.carol@dmi.columbia.edu P. Kra H. Yu M. Krauthammer A. Rzhetsky GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles. Bioinformatics 17, supplement 1 2001 S74 S82
    • (2001) Bioinformatics , vol.171
    • Friedman, C.1    Kra, P.2    Yu, H.3    Krauthammer, M.4    Rzhetsky, A.5
  • 12
    • 10244245424 scopus 로고    scopus 로고
    • BioRAT: Extracting biological information from full-length papers
    • d.corney@cs.ucl.ac.uk dtj@cs.ucl.ac.uk
    • D. P. A. Corney d.corney@cs.ucl.ac.uk B. F. Buxton W. B. Langdon D. T. Jones dtj@cs.ucl.ac.uk BioRAT: extracting biological information from full-length papers. Bioinformatics 20 17 2004 3206 3213
    • (2004) Bioinformatics , vol.20 , Issue.17 , pp. 3206-3213
    • Corney, D.P.A.1    Buxton, B.F.2    Langdon, W.B.3    Jones, D.T.4
  • 14
    • 34547683741 scopus 로고    scopus 로고
    • PubMiner: Machine learning-based text mining for biomedical information analysis
    • J. Eom B. Zhang PubMiner: machine learning-based text mining for biomedical information analysis. Genomics & Informatics 2 2004 2 99 106
    • (2004) Genomics & Informatics , vol.2 , Issue.2 , pp. 99-106
    • Eom, J.1    Zhang, B.2
  • 15
    • 2942549190 scopus 로고    scopus 로고
    • PreBIND and Textomy - Mining the biomedical literature for protein-protein interactions using a support vector machine
    • I. Donaldson J. Martin B. de Bruijn PreBIND and Textomy - mining the biomedical literature for protein-protein interactions using a support vector machine. BMC Bioinformatics 4 1 2003 11 23
    • (2003) BMC Bioinformatics , vol.4 , Issue.1 , pp. 11-23
    • Donaldson, I.1    Martin, J.2    De Bruijn, B.3
  • 16
    • 1842559914 scopus 로고    scopus 로고
    • Extracting human protein interactions from Medline using a full-sentence parser
    • nikolai@ariadnegenomics.com
    • N. Daraselia nikolai@ariadnegenomics.com A. Yuryev S. Egorov S. Novichkova A. Nikitin I. Mazo Extracting human protein interactions from Medline using a full-sentence parser. Bioinformatics 20 5 2004 604 611
    • (2004) Bioinformatics , vol.20 , Issue.5 , pp. 604-611
    • Daraselia, N.1    Yuryev, A.2    Egorov, S.3    Novichkova, S.4    Nikitin, A.5    Mazo, I.6
  • 17
    • 33747892781 scopus 로고    scopus 로고
    • Finding the evidence for protein-protein interactions from PubMed abstracts
    • janghc@etri.re.kr
    • H. Jang janghc@etri.re.kr J. Lim J.-H. Lim S.-J. Park K.-C. Lee S.-H. Park Finding the evidence for protein-protein interactions from PubMed abstracts. Bioinformatics 22 14 2006 e220 e226
    • (2006) Bioinformatics , vol.22 , Issue.14
    • Jang, H.1    Lim, J.2    Lim, J.-H.3    Park, S.-J.4    Lee, K.-C.5    Park, S.-H.6
  • 18
    • 10244245424 scopus 로고    scopus 로고
    • BioRAT: Extracting biological information from full-length papers
    • d.corney@cs.ucl.ac.uk dtj@cs.ucl.ac.uk
    • D. P. A. Corney d.corney@cs.ucl.ac.uk B. F. Buxton W. B. Langdon D. T. Jones dtj@cs.ucl.ac.uk BioRAT: extracting biological information from full-length papers. Bioinformatics 20 17 2004 3206 3213
    • (2004) Bioinformatics , vol.20 , Issue.17 , pp. 3206-3213
    • Corney, D.P.A.1    Buxton, B.F.2    Langdon, W.B.3    Jones, D.T.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.