메뉴 건너뛰기




Volumn 371, Issue 2, 2008, Pages 362-373

Circularization of an RNA template via long-range base pairing is critical for hepadnaviral reverse transcription

Author keywords

Hepatitis B virus; Minus strand DNA synthesis; Reverse transcription

Indexed keywords

CIS ACTING ELEMENT; VIRUS RNA;

EID: 38749128765     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2007.09.042     Document Type: Article
Times cited : (6)

References (38)
  • 1
    • 33646205969 scopus 로고    scopus 로고
    • Base pairing between the 5′ half of epsilon and a cis-acting sequence, phi, makes a contribution to the synthesis of minus-strand DNA for human hepatitis B virus
    • Abraham T.M., and Loeb D.D. Base pairing between the 5′ half of epsilon and a cis-acting sequence, phi, makes a contribution to the synthesis of minus-strand DNA for human hepatitis B virus. J. Virol. 80 9 (2006) 4380-4387
    • (2006) J. Virol. , vol.80 , Issue.9 , pp. 4380-4387
    • Abraham, T.M.1    Loeb, D.D.2
  • 2
    • 35448984203 scopus 로고    scopus 로고
    • Topology of HBV pregenomic RNA promotes its replication
    • Abraham T.M., and Loeb D.D. Topology of HBV pregenomic RNA promotes its replication. J. Virol. 81 21 (2007) 11577-11584
    • (2007) J. Virol. , vol.81 , Issue.21 , pp. 11577-11584
    • Abraham, T.M.1    Loeb, D.D.2
  • 3
    • 0031774329 scopus 로고    scopus 로고
    • Formation of a functional hepatitis B virus replication initiation complex involves a major structural alteration in the RNA template
    • Beck J., and Nassal M. Formation of a functional hepatitis B virus replication initiation complex involves a major structural alteration in the RNA template. Mol. Cell. Biol. 18 11 (1998) 6265-6272
    • (1998) Mol. Cell. Biol. , vol.18 , Issue.11 , pp. 6265-6272
    • Beck, J.1    Nassal, M.2
  • 4
    • 0348230966 scopus 로고    scopus 로고
    • RNA branching and debranching in the yeast retrovirus-like element Ty1
    • Cheng Z., and Menees T.M. RNA branching and debranching in the yeast retrovirus-like element Ty1. Science 303 5655 (2004) 240-243
    • (2004) Science , vol.303 , Issue.5655 , pp. 240-243
    • Cheng, Z.1    Menees, T.M.2
  • 5
    • 0037102438 scopus 로고    scopus 로고
    • A 5′-3′ long-range interaction in Ty1 RNA controls its reverse transcription and retrotransposition
    • Cristofari G., Bampi C., Wilhelm M., Wilhelm F.X., and Darlix J.L. A 5′-3′ long-range interaction in Ty1 RNA controls its reverse transcription and retrotransposition. EMBO J. 21 16 (2002) 4368-4379
    • (2002) EMBO J. , vol.21 , Issue.16 , pp. 4368-4379
    • Cristofari, G.1    Bampi, C.2    Wilhelm, M.3    Wilhelm, F.X.4    Darlix, J.L.5
  • 6
    • 0035170382 scopus 로고    scopus 로고
    • Effects of homology length in the repeat region on minus-strand DNA transfer and retroviral replication
    • Dang Q., and Hu W.S. Effects of homology length in the repeat region on minus-strand DNA transfer and retroviral replication. J. Virol. 75 2 (2001) 809-820
    • (2001) J. Virol. , vol.75 , Issue.2 , pp. 809-820
    • Dang, Q.1    Hu, W.S.2
  • 7
    • 0028987482 scopus 로고
    • Mutations in the epsilon sequences of human hepatitis B virus affect both RNA encapsidation and reverse transcription
    • Fallows D.A., and Goff S.P. Mutations in the epsilon sequences of human hepatitis B virus affect both RNA encapsidation and reverse transcription. J. Virol. 69 5 (1995) 3067-3073
    • (1995) J. Virol. , vol.69 , Issue.5 , pp. 3067-3073
    • Fallows, D.A.1    Goff, S.P.2
  • 9
    • 0018728052 scopus 로고
    • Nucleotide sequence of the hepatitis B virus genome (subtype ayw) cloned in E. coli
    • Galibert F., Mandart E., Fitoussi F., Tiollais P., and Charnay P. Nucleotide sequence of the hepatitis B virus genome (subtype ayw) cloned in E. coli. Nature 281 5733 (1979) 646-650
    • (1979) Nature , vol.281 , Issue.5733 , pp. 646-650
    • Galibert, F.1    Mandart, E.2    Fitoussi, F.3    Tiollais, P.4    Charnay, P.5
  • 11
    • 0242661867 scopus 로고    scopus 로고
    • Template switches during plus-strand DNA synthesis of duck hepatitis B virus are influenced by the base composition of the minus-strand terminal redundancy
    • Habig J.W., and Loeb D.D. Template switches during plus-strand DNA synthesis of duck hepatitis B virus are influenced by the base composition of the minus-strand terminal redundancy. J. Virol. 77 23 (2003) 12412-12420
    • (2003) J. Virol. , vol.77 , Issue.23 , pp. 12412-12420
    • Habig, J.W.1    Loeb, D.D.2
  • 12
    • 0026004457 scopus 로고
    • cis-Acting sequences required for encapsidation of duck hepatitis B virus pregenomic RNA
    • Hirsch R.C., Loeb D.D., Pollack J.R., and Ganem D. cis-Acting sequences required for encapsidation of duck hepatitis B virus pregenomic RNA. J. Virol. 65 6 (1991) 3309-3316
    • (1991) J. Virol. , vol.65 , Issue.6 , pp. 3309-3316
    • Hirsch, R.C.1    Loeb, D.D.2    Pollack, J.R.3    Ganem, D.4
  • 13
    • 0034116924 scopus 로고    scopus 로고
    • Evidence that the 5′-end cap structure is essential for encapsidation of hepatitis B virus pregenomic RNA
    • Jeong J.K., Yoon G.S., and Ryu W.S. Evidence that the 5′-end cap structure is essential for encapsidation of hepatitis B virus pregenomic RNA. J. Virol. 74 12 (2000) 5502-5508
    • (2000) J. Virol. , vol.74 , Issue.12 , pp. 5502-5508
    • Jeong, J.K.1    Yoon, G.S.2    Ryu, W.S.3
  • 14
    • 0025045477 scopus 로고
    • A short cis-acting sequence is required for hepatitis B virus pregenome encapsidation and sufficient for packaging of foreign RNA
    • Junker-Niepmann M., Bartenschlager R., and Schaller H. A short cis-acting sequence is required for hepatitis B virus pregenome encapsidation and sufficient for packaging of foreign RNA. EMBO J. 9 10 (1990) 3389-3396
    • (1990) EMBO J. , vol.9 , Issue.10 , pp. 3389-3396
    • Junker-Niepmann, M.1    Bartenschlager, R.2    Schaller, H.3
  • 15
    • 1542375914 scopus 로고    scopus 로고
    • Versatile PCR-mediated insertion or deletion mutagenesis
    • Lee J., Lee H.-J., Shin M.-K., and Ryu W.-S. Versatile PCR-mediated insertion or deletion mutagenesis. BioTechniques 36 3 (2004) 398-400
    • (2004) BioTechniques , vol.36 , Issue.3 , pp. 398-400
    • Lee, J.1    Lee, H.-J.2    Shin, M.-K.3    Ryu, W.-S.4
  • 16
    • 3142682433 scopus 로고    scopus 로고
    • Three novel cis-acting elements required for efficient plus-strand DNA synthesis of the hepatitis B virus genome
    • Lee J., Shin M.-K., Lee H.-J., Yoon G., and Ryu W.-S. Three novel cis-acting elements required for efficient plus-strand DNA synthesis of the hepatitis B virus genome. J. Virol. 78 14 (2004) 7455-7464
    • (2004) J. Virol. , vol.78 , Issue.14 , pp. 7455-7464
    • Lee, J.1    Shin, M.-K.2    Lee, H.-J.3    Yoon, G.4    Ryu, W.-S.5
  • 17
    • 34249934195 scopus 로고    scopus 로고
    • Base pairing between cis-acting sequences contributes to template switching during plus-strand DNA synthesis in human hepatitis B virus
    • Lewellyn E.B., and Loeb D.D. Base pairing between cis-acting sequences contributes to template switching during plus-strand DNA synthesis in human hepatitis B virus. J. Virol. 81 12 (2007) 6207-6215
    • (2007) J. Virol. , vol.81 , Issue.12 , pp. 6207-6215
    • Lewellyn, E.B.1    Loeb, D.D.2
  • 18
    • 0037452712 scopus 로고    scopus 로고
    • Base pairing among three cis-acting sequences contributes to template switching during hepadnavirus reverse transcription
    • Liu N., Tian R., and Loeb D.D. Base pairing among three cis-acting sequences contributes to template switching during hepadnavirus reverse transcription. PNAS 100 4 (2003) 1984-1989
    • (2003) PNAS , vol.100 , Issue.4 , pp. 1984-1989
    • Liu, N.1    Tian, R.2    Loeb, D.D.3
  • 19
    • 0028786893 scopus 로고
    • Transfer of the minus strand of DNA during hepadnavirus replication is not invariable but prefers a specific location
    • Loeb D.D., and Tian R. Transfer of the minus strand of DNA during hepadnavirus replication is not invariable but prefers a specific location. J. Virol. 69 11 (1995) 6886-6891
    • (1995) J. Virol. , vol.69 , Issue.11 , pp. 6886-6891
    • Loeb, D.D.1    Tian, R.2
  • 20
    • 0031060152 scopus 로고    scopus 로고
    • Sequence identity of the terminal redundancies on the minus-strand DNA template is necessary but not sufficient for the template switch during hepadnavirus plus-strand DNA synthesis
    • Loeb D.D., Gulya K.J., and Tian R. Sequence identity of the terminal redundancies on the minus-strand DNA template is necessary but not sufficient for the template switch during hepadnavirus plus-strand DNA synthesis. J. Virol. 71 1 (1997) 152-160
    • (1997) J. Virol. , vol.71 , Issue.1 , pp. 152-160
    • Loeb, D.D.1    Gulya, K.J.2    Tian, R.3
  • 21
    • 0026695732 scopus 로고
    • The arginine-rich domain of the hepatitis B virus core protein is required for pregenome encapsidation and productive viral positive-strand DNA synthesis but not for virus assembly
    • Nassal M. The arginine-rich domain of the hepatitis B virus core protein is required for pregenome encapsidation and productive viral positive-strand DNA synthesis but not for virus assembly. J. Virol. 66 7 (1992) 4107-4116
    • (1992) J. Virol. , vol.66 , Issue.7 , pp. 4107-4116
    • Nassal, M.1
  • 22
    • 0029940006 scopus 로고    scopus 로고
    • A bulged region of the hepatitis B virus RNA encapsidation signal contains the replication origin for discontinuous first-strand DNA synthesis
    • Nassal M., and Rieger A. A bulged region of the hepatitis B virus RNA encapsidation signal contains the replication origin for discontinuous first-strand DNA synthesis. J. Virol. 70 5 (1996) 2764-2773
    • (1996) J. Virol. , vol.70 , Issue.5 , pp. 2764-2773
    • Nassal, M.1    Rieger, A.2
  • 23
    • 0025604455 scopus 로고
    • Translational inactivation of RNA function: discrimination against a subset of genomic transcripts during HBV nucleocapsid assembly
    • Nassal M., Junker-Niepmann M., and Schaller H. Translational inactivation of RNA function: discrimination against a subset of genomic transcripts during HBV nucleocapsid assembly. Cell 63 6 (1990) 1357-1363
    • (1990) Cell , vol.63 , Issue.6 , pp. 1357-1363
    • Nassal, M.1    Junker-Niepmann, M.2    Schaller, H.3
  • 24
    • 0035114188 scopus 로고    scopus 로고
    • The polymerase L528M mutation cooperates with nucleotide binding-site mutations, increasing hepatitis B virus replication and drug resistance
    • Ono S.K., Kato N., Shiratori Y., Kato J., Goto T., Schinazi R.F., Carrilho F.J., and Omata M. The polymerase L528M mutation cooperates with nucleotide binding-site mutations, increasing hepatitis B virus replication and drug resistance. J. Clin. Invest. 107 4 (2001) 449-455
    • (2001) J. Clin. Invest. , vol.107 , Issue.4 , pp. 449-455
    • Ono, S.K.1    Kato, N.2    Shiratori, Y.3    Kato, J.4    Goto, T.5    Schinazi, R.F.6    Carrilho, F.J.7    Omata, M.8
  • 25
    • 33847084031 scopus 로고    scopus 로고
    • Complementarity between epsilon and phi sequences in pregenomic RNA influences hepatitis B virus replication efficiency
    • Oropeza C.E., and McLachlan A. Complementarity between epsilon and phi sequences in pregenomic RNA influences hepatitis B virus replication efficiency. Virology 359 2 (2007) 371-381
    • (2007) Virology , vol.359 , Issue.2 , pp. 371-381
    • Oropeza, C.E.1    McLachlan, A.2
  • 26
    • 0027167557 scopus 로고
    • An RNA stem-loop structure directs hepatitis B virus genomic RNA encapsidation
    • Pollack J.R., and Ganem D. An RNA stem-loop structure directs hepatitis B virus genomic RNA encapsidation. J. Virol. 67 6 (1993) 3254-3263
    • (1993) J. Virol. , vol.67 , Issue.6 , pp. 3254-3263
    • Pollack, J.R.1    Ganem, D.2
  • 27
    • 0028095240 scopus 로고
    • Site-specific RNA binding by a hepatitis B virus reverse transcriptase initiates two distinct reactions: RNA packaging and DNA synthesis
    • Pollack J.R., and Ganem D. Site-specific RNA binding by a hepatitis B virus reverse transcriptase initiates two distinct reactions: RNA packaging and DNA synthesis. J. Virol. 68 9 (1994) 5579-5587
    • (1994) J. Virol. , vol.68 , Issue.9 , pp. 5579-5587
    • Pollack, J.R.1    Ganem, D.2
  • 28
    • 0029655242 scopus 로고    scopus 로고
    • Specific hepatitis B virus minus-strand DNA synthesis requires only the 5′ encapsidation signal and the 3′-proximal direct repeat DR1
    • Rieger A., and Nassal M. Specific hepatitis B virus minus-strand DNA synthesis requires only the 5′ encapsidation signal and the 3′-proximal direct repeat DR1. J. Virol. 70 1 (1996) 585-589
    • (1996) J. Virol. , vol.70 , Issue.1 , pp. 585-589
    • Rieger, A.1    Nassal, M.2
  • 29
    • 0035880918 scopus 로고    scopus 로고
    • Initiation of DNA replication by DNA polymerases from primers forming a triple helix
    • Rocher C., Dalibart R., Letellier T., Precigoux G., and Lestienne P. Initiation of DNA replication by DNA polymerases from primers forming a triple helix. Nucleic Acids Res. 29 16 (2001) 3320-3326
    • (2001) Nucleic Acids Res. , vol.29 , Issue.16 , pp. 3320-3326
    • Rocher, C.1    Dalibart, R.2    Letellier, T.3    Precigoux, G.4    Lestienne, P.5
  • 30
    • 0033621452 scopus 로고    scopus 로고
    • A small 2′-OH- and base-dependent recognition element downstream of the initiation site in the RNA encapsidation signal is essential for hepatitis B virus replication initiation
    • Schaaf S.G., Beck J., and Nassal M. A small 2′-OH- and base-dependent recognition element downstream of the initiation site in the RNA encapsidation signal is essential for hepatitis B virus replication initiation. J. Biol. Chem. 274 53 (1999) 37787-37794
    • (1999) J. Biol. Chem. , vol.274 , Issue.53 , pp. 37787-37794
    • Schaaf, S.G.1    Beck, J.2    Nassal, M.3
  • 31
    • 2642529296 scopus 로고    scopus 로고
    • A novel cis-acting element facilitates minus-strand DNA synthesis during reverse transcription of the hepatitis B viruses genome
    • Shin M.-K., Lee J., and Ryu W.-S. A novel cis-acting element facilitates minus-strand DNA synthesis during reverse transcription of the hepatitis B viruses genome. J. Virol. 78 (2004) 6252-6262
    • (2004) J. Virol. , vol.78 , pp. 6252-6262
    • Shin, M.-K.1    Lee, J.2    Ryu, W.-S.3
  • 32
    • 0036920307 scopus 로고    scopus 로고
    • A pregenomic RNA sequence adjacent to DR1 and complementary to epsilon influences hepatitis B virus replication efficiency
    • Tang H., and McLachlan A. A pregenomic RNA sequence adjacent to DR1 and complementary to epsilon influences hepatitis B virus replication efficiency. Virology 303 (2002) 199-210
    • (2002) Virology , vol.303 , pp. 199-210
    • Tang, H.1    McLachlan, A.2
  • 33
    • 0029010766 scopus 로고
    • RNA sequences controlling the initiation and transfer of duck hepatitis B virus minus-strand DNA
    • Tavis J., and Ganem D. RNA sequences controlling the initiation and transfer of duck hepatitis B virus minus-strand DNA. J. Virol. 69 7 (1995) 4283-4291
    • (1995) J. Virol. , vol.69 , Issue.7 , pp. 4283-4291
    • Tavis, J.1    Ganem, D.2
  • 34
    • 0029833252 scopus 로고    scopus 로고
    • Evidence for activation of the hepatitis B virus polymerase by binding of its RNA template
    • Tavis J.E., and Ganem D. Evidence for activation of the hepatitis B virus polymerase by binding of its RNA template. J. Virol. 70 9 (1996) 5741-5750
    • (1996) J. Virol. , vol.70 , Issue.9 , pp. 5741-5750
    • Tavis, J.E.1    Ganem, D.2
  • 35
    • 0028308495 scopus 로고
    • Hepadnavirus reverse transcription initiates within the stem-loop of the RNA packaging signal and employs a novel strand transfer
    • Tavis J.E., Perri S., and Ganem D. Hepadnavirus reverse transcription initiates within the stem-loop of the RNA packaging signal and employs a novel strand transfer. J. Virol. 68 6 (1994) 3536-3543
    • (1994) J. Virol. , vol.68 , Issue.6 , pp. 3536-3543
    • Tavis, J.E.1    Perri, S.2    Ganem, D.3
  • 36
    • 0002296754 scopus 로고    scopus 로고
    • Reverse transcriptase and the generation of retroviral DNA
    • Coffin J.M., Hughes S.H., and Varmus H.E. (Eds), Cold Spring Harbor Press, Cold Spring Harbor
    • Telesnitsky A., and Goff S.P. Reverse transcriptase and the generation of retroviral DNA. In: Coffin J.M., Hughes S.H., and Varmus H.E. (Eds). Retroviruses (1997), Cold Spring Harbor Press, Cold Spring Harbor 121-160
    • (1997) Retroviruses , pp. 121-160
    • Telesnitsky, A.1    Goff, S.P.2
  • 37
    • 0026493753 scopus 로고
    • The reverse transcriptase of hepatitis B virus acts as a protein primer for viral DNA synthesis
    • Wang G.H., and Seeger C. The reverse transcriptase of hepatitis B virus acts as a protein primer for viral DNA synthesis. Cell 71 4 (1992) 663-670
    • (1992) Cell , vol.71 , Issue.4 , pp. 663-670
    • Wang, G.H.1    Seeger, C.2
  • 38
    • 0027494086 scopus 로고
    • Novel mechanism for reverse transcription in hepatitis B viruses
    • Wang G.H., and Seeger C. Novel mechanism for reverse transcription in hepatitis B viruses. J. Virol. 67 11 (1993) 6507-6512
    • (1993) J. Virol. , vol.67 , Issue.11 , pp. 6507-6512
    • Wang, G.H.1    Seeger, C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.