Wide genetic diversity of Rosa damascena Mill. germplasm in Iran as revealed by RAPD analysis

Scientia Horticulturae

Volumn 115, Issue 4, 2008, Pages 386-392

  Kiani, Mahnaz ^a   Zamani, Zabihollah ^a   Khalighi, Ahmad ^a   Fatahi, Reza ^a   Byrne, David H ^b  

^a UNIVERSITY OF TEHRAN   (Iran)

^b TEXAS A AND M UNIVERSITY   (United States)

Author keywords

Breeding; Damask rose; Fingerprinting; Molecular markers; Rose oil

Indexed keywords

CLUSTER ANALYSIS; DECIDUOUS TREE; DNA FINGERPRINTING; GENETIC VARIATION; GENOTYPE; GERMPLASM; MOLECULAR ANALYSIS; VARIANCE ANALYSIS;

ASIA; BULGARIA; EURASIA; EUROPE; IRAN; MIDDLE EAST; SOUTHERN EUROPE;

ROSA X DAMASCENA;

EID: 38749120588     PISSN: 03044238     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.scienta.2007.10.013     Document Type: Article

References (33)

1. Agaoglu Y., Ergul A., and Baydar N. Molecular analyses of genetic diversity of oil rose (Rosa damascena Mill.) grown in Isparta (Turkey) region. Biotechnol. Biotechnol. Equip. 14 (2000) 16-18
2. Babaei A., Tabaei-Aghdaei S.R., Khosh-Khui M., Omidbaigi R., Naghavi M.R., Esselink G.D., and Smulders M.J.M. Microsatellite analysis of Damask rose (Rosa damascena Mill.) accessions from various regions in Iran reveals multiple genotypes. BMC Plant Biol. 7 (2007) 12 (doi:10.1186/1471-2229-7-12)
3. Baydar N.G., Baydar H., and Debener T. Analysis of genetic relationships among Rosa damascena plants grown in Turkey by using AFLP and microsatellite markers. J. Biotechnol. 3 (2004) 263-267
4. Bayrak A., and Akgul A. Volatile oil composition of Turkish rose (Rosa damascena). J. Sci. Food Agric. 64 (1994) 441-448
5. Chevallier A. The Encyclopedia of Medicinal Plants (1996), Dorling Kinderesly, London
6. Cubero J.I., Millan T., Osuna F., Torres A.M., and Cobos S. Varietal identification in Rosa by using isozyme and RAPD markers. Acta Hort. 424 (1996) 261-263
7. Debener T., and Mattiesch L. Effective pairwise combination of long primers for RAPD analyses in roses. Plant Breed. 177 (1998) 1-5
8. Esselink G.D., Smulders M.J.M., and Vosman B. Identification of cut rose (Rosa hybrida L.) and rootstock varieties using robust sequence tagged microsatellite site markers. Theor. Appl. Genet. 106 (2003) 277-286
9. Excoffier L. WINAMOVA, a Windows Program for Analyses of Molecular Population Genetic Data. Version 1.55 (1993), Genetics and Biometry Laboratory, University of Geneva, Geneva, Switzerland
10. Excoffier L., Smouse P.E., and Quattro J.M. Analysis of molecular variance inferred from metric distances among DNA haplotypes, application to human mitochondrial DNA restriction data. Genetics 131 (1992) 479-491
11. Hubbard M., Kelly J., Rajapakse S., Abbott A., and Ballard R. Restriction fragment length polymorphisms in rose and their use for cultivar identification. HortScience 27 (1992) 172-173
12. Hurst C.C. Notes on the origin and evolution of our garden roses. I. Ancient garden roses (2000 b.c. to a.d. 1800). J. Roy. Hort. Soc. 66 (1941) 73-82
13. Iwata H., Tsuneo K., and Ohno S. Triparental origin of Damask roses. Gene 259 (2000) 53-59
14. Jan C.H., and Byrne D.H. Rose germplasm analysis with RAPD markers. HortScience 34 2 (1999) 341-345
15. Miller, M.P., 1997. Tools for population genetic analysis (TFPGA) 1.3, a Windows Program for the analysis of the allozyme and molecular population genetic data. February 15 2007. .
16. Miller, M.P., 1998. Analysis of molecular variance preparing (AMOVA-PREP), a program for the preparation of analysis of molecular variance input files from dominant-markers raw data, version 1.01. February 15 2007. .
17. Nei M. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89 (1978) 583-590
18. Padmesh P., Reji J.V., Dhar M.J., and Seeni S. Estimation of genetic diversity in varieties of Mucuna pruriens using RAPD. Biol. Plant 50 3 (2006) 367-372
19. Perry E.J. Perry's Cyclopaedia of Perfumery vol. 2 (1925), J. & A. Churchill, London
20. Portis E., Acquadro A., Comino C., Mauromicale G., Saba E., and Lanteri S. Genetic structure of island populations of wild cardoon [Cynara cardunculus L. var. sylvestris (Lamk) Fiori] detected by AFLPs and SSRs. Plant Sci. 169 (2005) 199-210
21. Reynders S., and Bollereau P. Characterization of genetic diversity in genus Rosa by randomly amplified polymorphic DNA. Acta Hort. 424 (1996) 253-259
22. Rohlf F.J. NTsys-PC Numerical Taxonomy and Multivariate Analysis System, Version 2.1 (2000), Exeter Publications, Setauket, NY
23. Rusanov K., Kovacheva N., Vosman B., Zhang L., Rajapakse S., Atanassov A., and Atanassov I. Microsatellite analysis of Rosa damascena Mill. accessions reveals genetic similarity between genotypes used for rose oil production and old Damask rose varieties. Theor. Appl. Genet. 111 (2005) 804-809
24. Sneath P.H.A., and Sokal R.R. The Principles and Practice of Numerical Classification (1963), WH Freeman, San Francisco
25. Tessier C., David J., This P., Boursiquot J.M., and Charrier A. Optimization of the choice of molecular markers for varietal identification in Vitis vinifera L. Theor. Appl. Genet. 98 (1999) 171-177
26. Torres A.M., Millan T., and Cubero J.I. Identifying rose cultivars using random amplified polymorphic DNA. HortScience 28 (1993) 333-334
27. Upadhyay A., Jayadev K., Manimekalai R., and Parthasarathy V.A. Genetic relationship and diversity in Indian coconut accessions based on RAPD markers. Sci. Hort. 99 (2004) 353-362
28. Vroh Bi I., Hraventg L., Chandelier A., Mergeai G., and Du Jardin P. Improved RAPD amplification of recalcitrant plant DNA by use of activated charcoal during DNA extraction. Plant Breed. 115 (1996) 205-206
29. Weising K., Nybom H., Wolff k., and Gunter K. DNA Fingerprinting in Plants, Principle, Methods, and Applications. 2nd ed. (2005), CRC Press, Boca Raton, FL, USA
30. Wen X.P., Pang X.M., and Deng X.X. Characterization of genetic relationships of Rosa roxburghii Tratt and its relatives using morphological traits, RAPD and AFLP markers. J. Hort. Sci. Biotechnol. 79 (2004) 189-196
31. Widrlechner M.P. History and utilization of Rosa damascena. Econ. Bot. 35 (1981) 42-58
32. Williams J.G.K., Kubelik A.R., Livak K.J., Rafalski J.A., and Tingey S.V. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18 (1990) 6531-6535
33. Zhang D., Besse C., Cao M.Q., and Gandelin M.H. Evaluation of AFLPs for variety identification in modern rose (Rosa hybrida L.). Acta Hort. 546 (2001) 351-357