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Volumn 133, Issue 1-3, 2008, Pages 11-18

Density functional theory study of N-H⋯O, O-H⋯O and C-H⋯O hydrogen-bonding effects on the 14N and 2H nuclear quadrupole coupling tensors of N-acetyl-valine

Author keywords

Electric field gradient; Euler angles; Hydrogen bond; N acetyl valine; Quadrupole coupling constant

Indexed keywords

AMINO ACID DERIVATIVE; N ACETYLVALINE; UNCLASSIFIED DRUG;

EID: 38749083071     PISSN: 03014622     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bpc.2007.11.006     Document Type: Article
Times cited : (30)

References (43)
  • 2
    • 0001204696 scopus 로고    scopus 로고
    • Ab initio studies of amide-N-15 chemical shifts in dipeptides: applications to protein NMR spectroscopy
    • Le H., and Oldfield E. Ab initio studies of amide-N-15 chemical shifts in dipeptides: applications to protein NMR spectroscopy. J. Phys. Chem. (1996) 16423-16428
    • (1996) J. Phys. Chem. , pp. 16423-16428
    • Le, H.1    Oldfield, E.2
  • 3
    • 3142678080 scopus 로고    scopus 로고
    • Ab initio study of C-13 alpha chemical shift anisotropy tensors in peptides
    • Birn J., Poon A., Mao Y., and Ramamoorthy A. Ab initio study of C-13 alpha chemical shift anisotropy tensors in peptides. J. Am. Chem. Soc. 126 (2004) 8529-8534
    • (2004) J. Am. Chem. Soc. , vol.126 , pp. 8529-8534
    • Birn, J.1    Poon, A.2    Mao, Y.3    Ramamoorthy, A.4
  • 4
    • 0033526374 scopus 로고    scopus 로고
    • Effects of dynamics and environment on N-15 chemical shielding anisotropy in proteins. A combination of density functional theory, molecular dynamics simulation, and NMR relaxation
    • Scheurer C., Skrynnikov N.R., Lienin S.F., Straus S.K., Brüschweier R., and Ernst R.R. Effects of dynamics and environment on N-15 chemical shielding anisotropy in proteins. A combination of density functional theory, molecular dynamics simulation, and NMR relaxation. J. Am. Chem. Soc. 121 (1999) 4242-4251
    • (1999) J. Am. Chem. Soc. , vol.121 , pp. 4242-4251
    • Scheurer, C.1    Skrynnikov, N.R.2    Lienin, S.F.3    Straus, S.K.4    Brüschweier, R.5    Ernst, R.R.6
  • 5
    • 0000387787 scopus 로고
    • Determination of the carbon-13 chemical shift and nitrogen-14 electric field gradient tensor orientations with respect to the molecular frame in a polypeptide
    • Teng Q., Iqbal M., and Cross T.A. Determination of the carbon-13 chemical shift and nitrogen-14 electric field gradient tensor orientations with respect to the molecular frame in a polypeptide. J. Am. Chem. Soc. 114 (1992) 5312-5321
    • (1992) J. Am. Chem. Soc. , vol.114 , pp. 5312-5321
    • Teng, Q.1    Iqbal, M.2    Cross, T.A.3
  • 6
    • 21244462222 scopus 로고    scopus 로고
    • Single-crystal studies of peptide prolyl and glycyl N-15 shielding tensors
    • Waddell K.W., Chekmenev E.Y., and Wittebort R.J. Single-crystal studies of peptide prolyl and glycyl N-15 shielding tensors. J. Am. Chem. Soc. 127 (2005) 9030-9035
    • (2005) J. Am. Chem. Soc. , vol.127 , pp. 9030-9035
    • Waddell, K.W.1    Chekmenev, E.Y.2    Wittebort, R.J.3
  • 7
    • 0000568097 scopus 로고
    • Hydrogen-bond theories and models based on nuclear quadrupole resonance spectroscopy studies
    • Nogaj B. Hydrogen-bond theories and models based on nuclear quadrupole resonance spectroscopy studies. J. Phys. Chem. 91 (1987) 5863-5869
    • (1987) J. Phys. Chem. , vol.91 , pp. 5863-5869
    • Nogaj, B.1
  • 8
    • 0000419783 scopus 로고
    • Deuterium and nitrogen pure quadrupole resonance in amino acids. II
    • Hunt M.J., and Mackay A.L. Deuterium and nitrogen pure quadrupole resonance in amino acids. II. J. Magn. Reson. 22 (1976) 295-301
    • (1976) J. Magn. Reson. , vol.22 , pp. 295-301
    • Hunt, M.J.1    Mackay, A.L.2
  • 9
    • 49549158308 scopus 로고
    • Deuterium and nitrogen pure quadrupole resonance in deuterated amino acids
    • Hunt M.J., and Mackay A.L. Deuterium and nitrogen pure quadrupole resonance in deuterated amino acids. J. Magn. Reson. 15 (1974) 402-414
    • (1974) J. Magn. Reson. , vol.15 , pp. 402-414
    • Hunt, M.J.1    Mackay, A.L.2
  • 10
    • 0008707830 scopus 로고
    • N-14 NQR and ab initio MO calculations of quinolines, naphthyriden, and benzodiazines
    • Murgich J., Aray Y., and Soscum H.J. N-14 NQR and ab initio MO calculations of quinolines, naphthyriden, and benzodiazines. J. Phys. Chem. 96 (1992) 9198-9200
    • (1992) J. Phys. Chem. , vol.96 , pp. 9198-9200
    • Murgich, J.1    Aray, Y.2    Soscum, H.J.3
  • 11
    • 0011448335 scopus 로고
    • Nuclear electric quadrupole spectra in solids
    • Bersohn R. Nuclear electric quadrupole spectra in solids. J. Chem. Phys. 20 (1952) 1505-1509
    • (1952) J. Chem. Phys. , vol.20 , pp. 1505-1509
    • Bersohn, R.1
  • 12
    • 0035837962 scopus 로고    scopus 로고
    • Quantum chemical study on oxygen-17 and nitrogen-14 nuclear quadrupole coupling parameters of peptide bonds in α-helix and β-sheet proteins
    • Torrent M., Mansour D., Day E.P., and Morokuma K. Quantum chemical study on oxygen-17 and nitrogen-14 nuclear quadrupole coupling parameters of peptide bonds in α-helix and β-sheet proteins. J. Phys. Chem. A 105 (2001) 4546-4557
    • (2001) J. Phys. Chem. A , vol.105 , pp. 4546-4557
    • Torrent, M.1    Mansour, D.2    Day, E.P.3    Morokuma, K.4
  • 13
    • 0000996315 scopus 로고
    • Chemical shift and electric field gradient tensors for the amide and carboxyl hydrogens in the model peptide N-acetyl-D,L-valine. Single-crystal deuterium NMR study
    • Gerald II R., Bernhard T., Haeberlen U., Rendell J., and Opella S. Chemical shift and electric field gradient tensors for the amide and carboxyl hydrogens in the model peptide N-acetyl-D,L-valine. Single-crystal deuterium NMR study. J. Am. Chem. Soc. 115 (1993) 777-782
    • (1993) J. Am. Chem. Soc. , vol.115 , pp. 777-782
    • Gerald II, R.1    Bernhard, T.2    Haeberlen, U.3    Rendell, J.4    Opella, S.5
  • 15
    • 0000368696 scopus 로고
    • Peptide plane orientations determined by fundamental and overtone nitrogen 14 NMR
    • Tycko R., Stewart P.L., and Opella S.J. Peptide plane orientations determined by fundamental and overtone nitrogen 14 NMR. J. Am. Chem. Soc. 108 (1986) 5419-5425
    • (1986) J. Am. Chem. Soc. , vol.108 , pp. 5419-5425
    • Tycko, R.1    Stewart, P.L.2    Opella, S.J.3
  • 16
    • 0035819626 scopus 로고    scopus 로고
    • Orientation of amide-nitrogen-15 chemical shift tensors in peptides: a quantum chemical study
    • Brender J.R., Taylor D.M., and Ramamoorthy A. Orientation of amide-nitrogen-15 chemical shift tensors in peptides: a quantum chemical study. J. Am. Chem. Soc. 123 (2001) 914-922
    • (2001) J. Am. Chem. Soc. , vol.123 , pp. 914-922
    • Brender, J.R.1    Taylor, D.M.2    Ramamoorthy, A.3
  • 17
    • 0141959721 scopus 로고    scopus 로고
    • 14N quadrupolar coupling constant calculations in amino acid crystals: Zwitterionic, hydrogen-bonded systems
    • 14N quadrupolar coupling constant calculations in amino acid crystals: Zwitterionic, hydrogen-bonded systems. J. Phys. A 107 (2003) 7629-7642
    • (2003) J. Phys. A , vol.107 , pp. 7629-7642
    • Strohmeier, M.1    Stueber, D.2    Grant, D.M.3
  • 18
    • 0038556870 scopus 로고    scopus 로고
    • Proton NMR chemical shift behavior of hydrogen-bonded amide proton of glycine-containing peptides and polypeptides as studied by ab initio mo calculation
    • Hori S., Yamauchi K., and Kuroki S. Proton NMR chemical shift behavior of hydrogen-bonded amide proton of glycine-containing peptides and polypeptides as studied by ab initio mo calculation. Int. J. Mol. Sci. 3 (2002) 907-913
    • (2002) Int. J. Mol. Sci. , vol.3 , pp. 907-913
    • Hori, S.1    Yamauchi, K.2    Kuroki, S.3
  • 20
    • 0031273060 scopus 로고    scopus 로고
    • Structure of liquid N-methylacetamide: temperature dependence of NMR chemical shifts and quadrupole coupling constants
    • Ludwing R. Structure of liquid N-methylacetamide: temperature dependence of NMR chemical shifts and quadrupole coupling constants. J. Phys. Chem. A 101 (1997) 8861-8870
    • (1997) J. Phys. Chem. A , vol.101 , pp. 8861-8870
    • Ludwing, R.1
  • 21
    • 14844344040 scopus 로고    scopus 로고
    • 2H nuclear quadrupole coupling constants
    • 2H nuclear quadrupole coupling constants. J. Phys. Chem. A 109 (2005) 1729-1733
    • (2005) J. Phys. Chem. A , vol.109 , pp. 1729-1733
    • Elmi, F.1    Hadipour, N.L.2
  • 22
    • 0000842453 scopus 로고
    • Hydrogen-bonding effect on carbon-13 NMR chemical shifts of L-alanine residue carbonyl carbons of peptides in the solid state
    • Asakawa N., Kuroki S., Kurosu H., Ando I., Shoji A., and Ozaki T. Hydrogen-bonding effect on carbon-13 NMR chemical shifts of L-alanine residue carbonyl carbons of peptides in the solid state. J. Am. Chem. Soc. 114 (1992) 3261-3265
    • (1992) J. Am. Chem. Soc. , vol.114 , pp. 3261-3265
    • Asakawa, N.1    Kuroki, S.2    Kurosu, H.3    Ando, I.4    Shoji, A.5    Ozaki, T.6
  • 25
    • 33646241540 scopus 로고    scopus 로고
    • An investigation of hydrogen-bonding effects on the nitrogen and hydrogen electric field gradient and chemical shielding tensors in the 9-methyladenine real crystalline structure: a density functional theory study
    • Mirzaei M., and Hadipour N.L. An investigation of hydrogen-bonding effects on the nitrogen and hydrogen electric field gradient and chemical shielding tensors in the 9-methyladenine real crystalline structure: a density functional theory study. J. Phys. Chem. A 110 (2006) 4833-4838
    • (2006) J. Phys. Chem. A , vol.110 , pp. 4833-4838
    • Mirzaei, M.1    Hadipour, N.L.2
  • 26
    • 33750685301 scopus 로고    scopus 로고
    • 2H electric field gradient tensors in the real crystalline structure of α-glycine
    • 2H electric field gradient tensors in the real crystalline structure of α-glycine. Biophys. Chem. 125 (2007) 179-183
    • (2007) Biophys. Chem. , vol.125 , pp. 179-183
    • Behzadi, H.1    Hadipour, N.L.2    Mirzaei, M.3
  • 27
    • 2542500632 scopus 로고    scopus 로고
    • A study of hydrogen bond of imidazole and its 4-nitro derivative by ab initio and DFT calculated NQR parameters
    • Amini S.K., Hadipour N.L., and Elmi F. A study of hydrogen bond of imidazole and its 4-nitro derivative by ab initio and DFT calculated NQR parameters. Chem. Phys. Lett. 391 (2004) 95-100
    • (2004) Chem. Phys. Lett. , vol.391 , pp. 95-100
    • Amini, S.K.1    Hadipour, N.L.2    Elmi, F.3
  • 29
    • 0037181055 scopus 로고    scopus 로고
    • 17O Nuclear Magnetic Resonance Study of Nucleic Acid Bases
    • 17O Nuclear Magnetic Resonance Study of Nucleic Acid Bases. J. Am. Chem. Soc. 124 (2002) 1768-1777
    • (2002) J. Am. Chem. Soc. , vol.124 , pp. 1768-1777
    • Wu, G.1    Dong, S.2    Ida, R.3    Reen, N.4
  • 30
    • 33644546712 scopus 로고    scopus 로고
    • 17O NMR tensors in crystalline uracil: computational study
    • 17O NMR tensors in crystalline uracil: computational study. J. Phys. Chem. A 110 (2006) 1065-1071
    • (2006) J. Phys. Chem. A , vol.110 , pp. 1065-1071
    • Ida, R.1    Clerk, M.D.2    Wu, G.3
  • 31
    • 0035926602 scopus 로고    scopus 로고
    • 17O NMR of thymine: a potential new probe to nucleic acid base pairing
    • 17O NMR of thymine: a potential new probe to nucleic acid base pairing. Chem. Commun. (2001) 891-892
    • (2001) Chem. Commun. , pp. 891-892
    • Wu, G.1    Dong, S.2    Ida, R.3
  • 32
    • 0033553992 scopus 로고    scopus 로고
    • 13C chemical shift tensors in terpenes. 2. NMR characterization of distinct molecules in the asymmetric unit and steric influences on shift in parthenolide
    • 13C chemical shift tensors in terpenes. 2. NMR characterization of distinct molecules in the asymmetric unit and steric influences on shift in parthenolide. J. Am. Chem. Soc. 121 (1999) 6488-6496
    • (1999) J. Am. Chem. Soc. , vol.121 , pp. 6488-6496
    • Harper, J.K.1    McGeorge, G.2    Grant, D.M.3
  • 33
    • 0000691920 scopus 로고    scopus 로고
    • 13C chemical shifts of methyl bacteriopheophorbide a and bacteriochlorophyll a
    • 13C chemical shifts of methyl bacteriopheophorbide a and bacteriochlorophyll a. J. Phys. Chem. B 102 (1998) 2111-2116
    • (1998) J. Phys. Chem. B , vol.102 , pp. 2111-2116
    • Facelli, J.C.1
  • 34
    • 0000189651 scopus 로고
    • Density-functional thermochemistry. III. The role of exact exchange
    • Becke A.D. Density-functional thermochemistry. III. The role of exact exchange. J. Chem. Phys. 98 (1993) 5648-5652
    • (1993) J. Chem. Phys. , vol.98 , pp. 5648-5652
    • Becke, A.D.1
  • 35
    • 0035841045 scopus 로고    scopus 로고
    • Spectroscopic nuclear quadrupole moment
    • Pyykkö P. Spectroscopic nuclear quadrupole moment. Mol. Phys. 99 (2001) 1617-1629
    • (2001) Mol. Phys. , vol.99 , pp. 1617-1629
    • Pyykkö, P.1
  • 36
    • 0001115946 scopus 로고
    • Structures of two model peptides: N-acetyl-D,L-valine and N-acetyl-L-valyl-L-leucine
    • Carrol P.J., Stewart P.L., and Opella S. Structures of two model peptides: N-acetyl-D,L-valine and N-acetyl-L-valyl-L-leucine. J. Acta. Cryst., Sec. C 46 (1990) 243-246
    • (1990) J. Acta. Cryst., Sec. C , vol.46 , pp. 243-246
    • Carrol, P.J.1    Stewart, P.L.2    Opella, S.3
  • 40
    • 33745438254 scopus 로고    scopus 로고
    • 2H nuclear quadrupole resonance parameters of anhydrous and monohydrated cytosine crystalline structures: a density functional theory study
    • 2H nuclear quadrupole resonance parameters of anhydrous and monohydrated cytosine crystalline structures: a density functional theory study. J. Phys. Chem. B 110 (2006) 10991-10996
    • (2006) J. Phys. Chem. B , vol.110 , pp. 10991-10996
    • Mirzaei, M.1    Elmi, F.2    Hadipour, N.L.3
  • 41
    • 0001725651 scopus 로고
    • Nuclear quadrupole coupling constants and hydrogen bonding. Molecular orbital study of oxygen-17 and deuterium field gradients in formaldehyde-water hydrogen bonding
    • Butler L.G., and Brown T.L. Nuclear quadrupole coupling constants and hydrogen bonding. Molecular orbital study of oxygen-17 and deuterium field gradients in formaldehyde-water hydrogen bonding. J. Am. Chem. Soc. 103 (1981) 6541-6549
    • (1981) J. Am. Chem. Soc. , vol.103 , pp. 6541-6549
    • Butler, L.G.1    Brown, T.L.2
  • 43
    • 33947252199 scopus 로고    scopus 로고
    • 2H nuclear quadrupole coupling tensors in the real crystalline structure of acetaminophen
    • 2H nuclear quadrupole coupling tensors in the real crystalline structure of acetaminophen. Chem. Phys. 333 (2007) 97-104
    • (2007) Chem. Phys. , vol.333 , pp. 97-104
    • Behzadi, H.1    Esrafili, M.D.2    Hadipour, N.L.3


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