On representation of DNA by line distance matrix

Journal of Mathematical Chemistry

Volumn 43, Issue 2, 2008, Pages 674-692

  Randić, Milan ^a   Zupan, Jure ^a   Pisanski, Tomaž ^b  

^a NATIONAL INSTITUTE OF CHEMISTRY   (Slovenia)

^b UNIVERSITY OF LJUBLJANA   (Slovenia)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 38549146281     PISSN: 02599791     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10910-006-9219-1     Document Type: Article

References (50)

1. Hamori E., Ruskin J. (1983) J. Biol. Chem. 258: 1318
2. Hamori E. (1985). Nature 314: 585
3. Gates M.A. (1986) J. Theor. Biol. 119: 319
4. Hamori E. (1989). BioTechniques 7: 710
5. Jeffrey H.J. (1990) Nucleic Acids Res. 18: 2163
6. Nandy A. (1994) Curr. Sci. 66: 309
7. Leong P.M., Morgenthaler S. (1995) Comput. Appl. Biosci. 11: 503
8. Randić M., Vračko M., Nandy A., Basak S.C. (2000) J. Chem. Inf. Comput. Sci. 40: 1235
9. Randić M., Lerš N., Plavšić D. (2003) Chem. Phys. Lett. 368: 1
10. Randić M. (2004) Chem. Phys. Lett. 386: 468
11. Randić M., Vračko M., Lerš N., Plavšić D. (2003) Chem. Phys. Lett. 371: 202
12. Randić M., Vračko M., Zupan J., Novič M. (2003) Chem. Phys. Lett. 373: 558
13. Randić M., Zupan J. (2004) SAR and QSAR Environ. Res. 15: 147
14. Randić M. (2005) Period. Biol. 107: 415
15. Randić M., Vikić-Topić D., Graovac A., Lerš N., Plavšić D. (2005) Period. Biol. 107: 437
16. X. Liu, Q. Dai and T. Wang, J. Mol. Graph. Model (in press).
17. Zupan J., Randić M. (2005) J. Chem. Inf. Model. 45: 309
18. Guo X., Randić M., Basak S.C. (2001) Chem. Phys. Let. 350: 106
19. Randić M., Lerš N., Plavšić D., Basak S.C., Balaban A.T. (2005) Chem. Phys. Lett. 407: 205
20. Randić M. (2000) J. Chem. Inf. Comput. Sci. 40: 50
21. Randić M. (2000) Chem. Phys. Lett. 317: 29-342
22. Randić M., Basak S.C. (2001) J. Chem. Inf. Comput. Sci. 41: 561
23. Randić M., Vračko M. (2000) J. Chem. Inf. Comput. Sci. 40: 599
24. Randić M., Guo X., Basak S.C. (2001) J. Chem. Inf. Comput. Sci. 41: 619
25. Randić M., Balaban A.T. (2003) J. Chem. Inf. Comput. Sci. 43: 532
26. M. Randić, in: The Encyclopedia of Computational Chemistry, eds. P.V.R. Schleyer, N.L. Allinger, T. Clark, J. Gasteiger, P.A. Kollman, H.F. Schaefer III and P.R. Schreiner, (John Wiley, Chichester, 1998) p. 3018.
27. A.T. Balaban, in: Encyclopedia of Analytical Chemistry, ed. R.A. Meyers, (Wiley Chichester, UK, 2000).
28. R. Todeschini and V. Consonni, Handbook of Molecular Descriptors (Methods and Principles in Medicinal Chemistry, Vol. 11, eds. R. Mannhold, H. Kubinyi and H. Timmerman (Wiley-VCH, New York)
29. Katritzky A.R., Lobanov V., Karelson M. (1994). CODESSA (Comprehensive Descriptors for Structural and Statistical Analysis) University of Florida, Gainesville, FL
30. A.T. Balaban, in: Topological Indices and Related Descriptors in QSAR and QSPR eds. J. Devillers, A.T. Balaban, (Gordon and Breach, Amsterdam, The Netherlands, 1999) p. 403.
31. E. Estrada, in: Topological Indices and Related Descriptors in QSAR, and QSPR, eds. J. Devillers, A.T. Balaban, (Gordon and Breach, Amsterdam, 1999) p 403.
32. S.C. Basak, G.D. Grunwald and G.J. Niemi, in: From Chemical Topology to Three-dimensional Geometry, ed. A.T. Balaban, (Plenum Press, New York 1977) p. 73.
33. G. Jaklič, T. Pisanski and M. Randić, presented at Complex Objects Visualization 2005, University of Primorska, Koper, Slovenia, 16-19 November 2005.
34. G. Jaklič, T. Pisanski and M. Randić, MATCH, Comm. Math. Chem. (submitted).
35. G. Jaklič, T. Pisanski and M. Randić, J. Comput. Biol. (in press).
36. G. Jaklič, T. Pisanski and M. Randić, Poster: Ghent University, Belgium. Book of abstracts, p. 28, February 6-9 2006.
37. Brookes, M., The Matrix Reference Manual [on line] http://www.ee.ic.ac. uk/hp/staff/dmb/matrix/intro. html.2005
38. Hladnik M., Marušič D., Pisanski T. (2002) Discrete Math. 244: 137
39. Hladnik M. (1999) Linear Algebra Appl. 286: 261
40. Davis P.J. (1979). Circulant Matrices. Wiley, New York
41. Putnam C.R. (1964) Pac. J. Math. 14: 651
42. Wiener H. (1947) J. Am. Chem. Soc. 69: 17
43. Barnsley M.F., Rising H. (1993). Fractals Everywhere, 2nd ed. Academic Press, Boston, MA
44. M. Randić, J. Math. Chem. (submitted)
45. Randić M., Zupan J., Vikić-Topić D., Plavšić D. (2006) Chem. Phys. Lett. 431: 357
46. M. Randić, Acta Chim. Slovenica (in press).
47. M. Randić, M. Novič, D. Vikić-Topić, N. Lerš and D. Plavšić, J. Mol. Graph. Model. (submitted).
48. M. Randić, Chem. Phys. Lett. (submitted).
49. M. Randić and D. Juretić, J. Chem. Inf. Model. (submitted).
50. Hashimotoa Y., Niikura T., Tajima H., Yasukawa T., Sudo H., Ito Y., Kita Y., Kawasumi M., Koumaya K., Doyu M., Sobue G., Koide T., Tsuji S., Lang J., Kurokawa K., Nishimotoa I. (2001) Proc. Natl. Acad. Sci. USA 98: 6336