Distribution of Symbiobacterium thermophilum and related bacteria in the marine environment

Bioscience, Biotechnology and Biochemistry

Volumn 72, Issue 1, 2008, Pages 204-211

  Sugihara, Takafumi ^a   Watsuji, Tomo O ^a   Kubota, Shin ^a   Yamada, Kazune ^a   Oka, Kaori ^a   Watanabe, Kiyoshi ^a   Meguro, Michiko ^a   Sawada, Emi ^a   Yoshihara, Kiyoshi ^a   Ueda, Kenji ^a   Beppu, Teruhiko ^a  

^a NIHON UNIVERSITY   (Japan)

Author keywords

Distribution; Marine environment; Oyster shell; Symbiobacterium; Uncultured microorganism

Indexed keywords

CELL CULTURE; ECOSYSTEMS; GROWTH KINETICS; OCEAN HABITATS;

MARINE ENVIRONMENT; OYSTER SHELL; SYMBIOBACTERIUM; UNCULTURED MICROORGANISM;

BACTERIA;

BACTERIAL RNA; PRIMER DNA; RNA 16S; SEA WATER;

ACTINOBACTERIA; ANIMAL; ARTICLE; CLASSIFICATION; FECES; GENETICS; GEOGRAPHY; ISOLATION AND PURIFICATION; JAPAN; LACTOBACILLACEAE; MICROBIOLOGY; OYSTER; PHYLOGENY; POLYMERASE CHAIN REACTION; SEAWEED;

ACTINOBACTERIA; ANIMALS; DNA PRIMERS; FECES; GEOGRAPHY; JAPAN; LACTOBACILLACEAE; OSTREIDAE; PHYLOGENY; POLYMERASE CHAIN REACTION; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SEAWATER; SEAWEED; WATER MICROBIOLOGY;

ACTINOBACTERIA; BACTERIA (MICROORGANISMS); FIRMICUTES; OSTREIDAE; SYMBIOBACTERIUM; SYMBIOBACTERIUM THERMOPHILUM;

EID: 38549090508     PISSN: 09168451     EISSN: 13476947     Source Type: Journal    
DOI: 10.1271/bbb.70619     Document Type: Article

References (14)

1. Suzuki, S., Horinouchi, S., and Beppu, T., Growth of a tryptophanase-producing thermophile, Symbiobacterium thermophilum gen. nov., sp. nov., is dependent on co-culture with a Bacillus sp. J. Gen. Microbiol., 134, 2353-2362 (1988).
2. Ueda, K., and Beppu, T., Lessons from studies of Symbiobacterium thermophilum, a unique syntrophic bacterium. Biosci. Biotechnol. Biochem., 71, 1115-1121 (2007).
3. Ohno, M., Okano, I., Watsuji, T., Kakinuma, T., Ueda, K., and Beppu, T., Establishing the independent culture of a strictly symbiotic bacterium Symbiobacterium thermophilum from its supporting Bacillus strain. Biosci. Biotechnol. Biochem., 63, 1083-1090 (1999).
4. Ueda, K., Saka, H., Ishikawa, Y., Kato, T., Takeshita, Y., Shiratori, H., Ohno, M., Hosono, K., Wada, M., and Beppu, T., Development of a membrane dialysis bioreactor and its application to a large-scale culture of a symbiotic bacterium, Symbiobacterium thermophilum. Appl. Microbiol. Biotechnol., 60, 300-305 (2002).
5. Ohno, M., Shiratori, H., Park, M. J., Saitoh, Y., Kumon, Y., Yamashita, N., Hirata, A., Nishida, H., Ueda, K., and Beppu, T., Symbiobacterium thermophilum gen. nov., sp. nov., a symbiotic thermophile that depends on co-culture with a Bacillus strain for growth. Int. J. Syst. Evol. Microbiol., 50, 1829-1832 (2000).
6. Ueda, K., Yamashita, A., Ishikawa, J., Shimada, M., Watsuji, T. O., Morimura, K., Ikeda, H., Hattori, M., and Beppu, T., Genome sequence of Symbiobacterium thermophilum, an uncultivable bacterium that depends on microbial commensalism. Nucleic Acids Res., 32, 4937-4944 (2004).
7. Ueda, K., Ohno, M., Yamamoto, K., Nara, H., Mori, Y., Shimada, M., Hayashi, M., Oida, H., Terashima, Y., Nagata, M., and Beppu, T., Distribution and diversity of symbiotic thermophiles, Symbiobacterium thermophilum and related bacteria, in natural environments. Appl. Environ. Microbiol., 67, 3779-3784 (2001).
8. Williams, J. G., Kubelik, A. R., Livak, K. J., Rafalski, J. A., and Tingey, S. V., DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res., 18, 6531-6535 (1990).
9. Takai, K., Inoue, A., and Horikoshi, K., Methanothermococcus okinawensis sp. nov., a thermophilic, methane-producing archaeon isolated from a Western Pacific deep-sea hydrothermal vent system. Int. J. Syst. Evol. Microbiol., 52, 1089-1095 (2002).
10. Alain, K., Querellou, J., Lesongeur, F., Pignet, P., Crassous, P., Raguenes, G., Cueff, V., and Cambon-Bonavita, M. A., Caminibacter hydrogeniphilus gen. nov., sp. nov., a novel thermophilic, hydrogen-oxidizing bacterium isolated from an East Pacific Rise hydrothermal vent. Int. J. Syst. Evol. Microbiol., 52, 1317-1323 (2002).
11. Henry, E. A., Devereux, R., Maki, J. S., Gilmour, C. C., Woese, C. R., Mandelco, L., Schauder, R., Remsen, C. C., and Mitchell, R., Characterization of a new thermophilic sulfate-reducing bacterium Thermodesulfovibrio yellowstonii, gen. nov. and sp. nov.: its phylogenetic relationship to Thermodesulfobacterium commune and their origins deep within the bacterial domain. Arch. Microbiol., 161, 62-69 (1994).
12. 2 supply induces the growth of Symbiobacterium thermophilum, a syntrophic bacterium. Biosci. Biotechnol. Biochem., 70, 753-756 (2006).
13. Watsuji, T. O., Yamada, S., Yamabe, T., Watanabe, Y., Kato, T., Saito, T., Ueda, K., and Beppu, T., Identification of indole derivatives as a self-growth inhibitor of Symbiobacterium thermophilum, a unique bacterium whose growth depends on coculture with Bacillus sp. Appl. Environ. Microbiol., 73, 6159-6165 (2007).
14. Sung, M.-H., Bae, J.-W., Kim, J.-J., Kim, K., Song, J. J., Rhee, S.-K., Jeon, C. O., Choi, Y.-H., Hong, S.-P., Lee, S.-G., Ha, J. S., and Kang, G. T., Symbiobacterium toebii sp. nov., commensal thermophile isolated from Korean compost. J. Microbiol. Biotechnol., 13, 1013-1017 (2003).