Detection of pineapple bacilliform virus using the polymerase chain reaction

Annals of Applied Biology

Volumn 129, Issue 1, 1996, Pages 57-69

  Thomson, K G ^a   Dietzgen, R G ^a   Thomas, J E ^b   Teakle, D S ^a  

^a UNIVERSITY OF QUEENSLAND   (Australia)

^b DEPARTMENT OF AGRICULTURE AND FISHERIES   (Australia)

Author keywords

Badnavirus; Diagnostics; PCR; Pineapple mealybug wilt

Indexed keywords

ANANAS COMOSUS; BADNAVIRUS; BANANA STREAK VIRUS; PINEAPPLE BACILLIFORM VIRUS; PSEUDOCOCCIDAE; SACCHARUM HYBRID CULTIVAR;

EID: 3843108067     PISSN: 00034746     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1744-7348.1996.tb05731.x     Document Type: Article

References (30)

1. Autrey L J C, Boolell S, Lockhart B E L. 1991. Sugarcane bacilliform virus: symptomatology, diagnosis and distribution in cane germplasm in Mauritius. Proceedings of the 3rd ISSCT Sugarcane Pathology Workshop, Mauritius Sugar Industry Research Institute, p. 15.
2. Bouhida M, Lockhart B E L, Olszewski N E. 1993. An analysis of the complete sequence of a sugarcane bacilliform virus genome infectious to banana and rice. Journal of General Virology 74:15-22.
3. Braithwaite K S, Egeskov N M, Smith G R. 1995. Detection of sugarcane bacilliform virus using the polymerase chain reaction. Plant Disease 72:792-796.
4. De Boer S H, Ward L J, Li X, Chittaranjan S. 1995. Attenuation of PCR inhibition in the presence of plant compounds by the addition of BLOTTO. Nucleic Acids Research 23:2567-2568.
5. German T L, Ullman D E, Gunasinghe U B. 1992. Mealybug wilt of pineapple. Advances in Disease Vector Research 9:241-259.
6. Gunasinghe U B, German T L. 1989. Purification and partial characterization of a virus from pineapple. Phytopathology 79:1337-1341.
7. Hagen L S, Jacquemond M, Lepingle A, Lot H, Tepfer M. 1993. Nucleotide sequence and genomic organization of cacao swollen shoot virus. Virology 196:619-628.
8. Hay J, Grieco F, Druka A, Pinner M, Sor-Cheng L, Hull R. 1994. Detection of rice tungro bacilliform virus gene products in vivo. Virology 205:430-437.
9. Hay J M, Jones M C, Blakebrough M L, Dasgupta I, Davies J W, Hull R. 1991. An analysis of the sequence of an infectious clone of rice tungro bacilliform virus, a plant pararetrovirus. Nucleic Acids Research 19:2615-2621.
10. Hearon S S, Locke J C. 1984. Graft, pollen and seed transmission of an agent associated with top spotting in Kalanchoë blossfeldiana. Plant Disease 68:347-350.
11. Hibino H, Ishikawa K, Omura T, Cabauatan P Q, Koganezawa H. 1991. Characterization of rice tungro bacilliform and rice spherical viruses. Phytopathology 81:1130-1132.
12. Kano H, Koizumi M, Noda H, Hibino H, Ishikawa K, Omura T, Cabauatan P Q, Koganezawa H. 1992. Nucleotide sequence of capsid protein gene of rice tungro bacilliform virus. Archives of Virology 124:157-163.
13. Kaye S, Loveday C, Tedder R S. 1991. Storage and preservation of whole blood samples for use in detection of human immunodeficiency virus type-1 by the polymerase chain reaction. Journal of Virological Methods 35:217-226.
14. Lockhart BEL. 1990. Evidence for a double-stranded circular DNA genome in a second group of plant viruses. Phytopathology 80:127-131.
15. Lockhart B E L, Autrey L J C. 1991. Mealybug transmission of sugarcane bacilliform and sugarcane clostero-like viruses. Proceedings of the 3rd ISSCT Sugarcane Pathology Workshop, Mauritius Sugar Industry Research Institute, p. 17.
16. Lockhart BEL, Olszewski N E. 1993. Serological and genomic heterogeneity of banana streak badnavirus: implications for virus detection in Musa gerrnplasm. In Breeding Banana and Plantain for Resistance to Diseases and Pests, pp. 105-113. Ed. J Ganry. Montpellier, France: CIRAD/ INIBAP.
17. Lockhart BEL, Olszewski N E, Hull R. 1995. Genus Badnavirus. In Virus Taxonomy, pp. 185-188. Eds F A Murphy, C M Fauquet, DHL Bishop, S A Ghabrial, A W Jarvis, G P Martelli, M A Mayo and M D Summers. Sixth Report of the International Committee on Taxonomy of Viruses.
18. Lockhart BEL, Olszewski N E, Lockhart N J. 1993. Genomic heterogeneity in badnavirus species. Abstracts of the IXth International Congress of Virology p. 105. Glasgow, Scotland.
19. Lowe T, Sharefkin J, Yang S Q, Dieffenbach C W. 1990. A computer program for selection of oligonucleotides for polymerase chain reaction. Nucleic Acids Research 18:1757-1761.
20. Medberry S L, Lockhart B E L, Olszewski, N E. 1990. Properties of Commelina yellow mottle virus' complete DNA sequence, genomic discontinuities and transcript suggest that it is a pararetrovirus. Nucleic Acids Research 18:5505-5513.
21. Medberry S L, Lockhart B E L, Olszewski, N E. 1992. The commelina yellow mottle virus promoter is a strong promoter in vascular and reproductive tissues. The Plant Cell 4:185-192.
22. Qu R, Bhattacharyya M, Laco G S, de Kochko A, Rao B L S, Kaniewska M B, Elmer J S, Rochester D E, Smith C E, Beachy R N. 1991. Characterization of the genome of rice tungro bacilliform virus: comparison with Commelina yellow mottle virus and caulimoviruses. Virology 185:354-364.
23. Rohrbach K G, Beardsley J W, German T L, Reimer N J, Sanford W G. 1988. Mealybug wilt, mealybugs, and ants on pineapple. Plant Disease 72:558-565.
24. Sagemann W, Lesemann D -E, Paul H L, Adomako D, Owusa G K. 1985. Detection and comparison of some Ghanaian isolates of cacao swollen shoot virus (CSSV) by enzyme-linked immunosorbent assay (ELISA) and immunoelectron microscopy (IEM) using an antiserum to CSSV strain 1A. Journal of Phytopathology 114:79-89.
25. Sambrook J, Fritsch E F, Maniatis T. 1989. Molecular Cloning: A Laboratory Manual. 2nd Edn. Cold Spring Harbor Laboratory Press.
26. Smith G R, Van de Velde, Dale J L. 1992. PCR amplification of a specific double-stranded RNA region of Fiji disease virus from diseased sugarcane. Journal of Virological Methods 39:237-246.
27. Takahashi Y, Tiongco E R, Cabauatan P Q, Koganezawa H, Hibino H, Omura T. 1993. Detection of rice tungro bacilliform virus by polymerase chain reaction for assessing mild infection of plants and viruliferous vector leafhoppers. Phytopathology 83:655-659.
28. Thompson J D, Higgins D G, Gibson T J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22:4673-4680.
29. Thomson D, Dietzgen R G. 1995. Detection of DNA and RNA plant viruses by PCR and RT-PCR using a rapid virus release protocol without tissue homogenisation. Journal of Virological Methods 54:85-95.
30. Wakman W, Teakle D S, Thomas J E, Dietzgen R G. 1995. Presence of a clostero-like virus and a bacilliform virus in pineapple plants in Australia. Australian Journal of Agricultural Research 46:947-958.