A novel mcl PHA-producing bacterium, Pseudomonas guezennei sp. nov., isolated from a 'kopara' mat located in Rangiroa, an atoll of French Polynesia

Journal of Applied Microbiology

Volumn 104, Issue 2, 2008, Pages 581-586

  Simon Colin, C ^a   Alain, K ^b   Colin, S ^a   Cozien, J ^a   Costa, B ^c   Guezennec, J G ^a   Raguenes G H C ^a  

^a IFREMER   (France)

^b Laboratoire d Océanographie Microbienne   (France)

^c Biolib   (French Polynesia)

Author keywords

Kopara; Microbial mat; Polyhydroxyalkanaote; Pseudomonas

Indexed keywords

CHAIN LENGTH; IONIC STRENGTH;

BACTERIAL MATS; CHAINS LENGTH; HETEROTROPHIC BACTERIAS; KOPARUM; MCL-POLYHYDROXYALKANOATE; MESOPHILIC BACTERIA; MICROBIAL MATS; POLYHYDROXYALKANAOTE; POLYHYDROXYALKANOATES; PSEUDOMONA;

BACTERIA;

POLYHYDROXYALKANOIC ACID;

ATOLL; BACTERIUM; BIOLOGICAL PRODUCTION; GROWTH RESPONSE; MICROBIAL MAT; TAXONOMY;

ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; DNA CONTENT; FRENCH POLYNESIA; GENOTYPE; IONIC STRENGTH; LABORATORY; MASS SPECTROMETER; MICROORGANISM; NONHUMAN; NUCLEAR MAGNETIC RESONANCE; NUCLEOTIDE SEQUENCE; PH; PHENOTYPE; PSEUDOMONAS;

FRENCH POLYNESIA; PACIFIC ISLANDS; PACIFIC OCEAN; POLYNESIA; RANGIROA; TUAMOTU ARCHIPELAGO;

BACTERIA (MICROORGANISMS); PSEUDOMONAS;

EID: 38349168128     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2007.03568.x     Document Type: Article

References (24)

1. Anderson, A.J. Dawes, E.A. (1990) Occurrence, metabolism, metabolic role, and industrial use of bacterial polyhydroalkanoates. Microbiol Rev 54, 450 472.
2. Andréfouët, S., Hochberg, E.J., Payri, C., Atkinson, M.J., Muller-Karger, F.E. Ripley, H. (2003) Multi-scale remote sensing of microbial mats in atoll environment. Int J Remote Sens 24, 2661 2682.
3. Ashby, R.D., Solaiman, D.K.Y. Foglia, T.A. (2004) Bacterial poly(hydroxyalkanoate) polymer production from the biodiesel co-product stream. J Polym Environ 12, 105 112.
4. Ashby, R.D., Solaiman, D.K.Y. Foglia, T.A. (2005) Synthesis of short-/medium-chain-length poly(hydroxyalkanoates) blends by mixed culture fermentation of glycerol. Biomacromolecules 6, 2106 2112.
5. Braunegg, G., Lefebvre, G. Genser, K.F. (1998) Polyhydroxyalkanoates, biopolyesters from renewable resources: physiological and engineering aspects. J Biotechnol 65, 127 161.
6. Cashion, P., Hodler-Franklin, M.A., McCully, J. Franklin, M. (1977) A rapid method for base ratio determination of bacterial DNA. Anal Biochem 81, 441 466.
7. De Ley, J., Cattoir, H. Reynaerts, A. (1970) The quantitative measurement of DNA hybridization renaturation rates. Eur J Biochem 12, 133 142.
8. Doi, Y. (1990) Microbial Polyesters. New York : VHC Publishers.
9. Hankermeyer, C.R. Tjeerdema, R.S. (1999) Polyhydroxybutyrate: plastic made and degraded by microorganisms. Rev Environ Contam Toxicol 159, 1 24.
10. Hocking, P.J. Marchessault, R.H. (1994) Biopolyesters. In Chemistry and Technology of Biodegradable Polymers ed. Griffin, G.J.L. pp. 49 96. London, UK : Blackie Academic and Professional.
11. Huss, V.A.R., Festl, H. Schleifer, K.H. (1983) Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184 192.
12. Jiang, X., Ramsay, J.A. Ramsay, B.A. (2006) Acetone extraction of mcl-PHA from Pseudomonas putida KT 2440. J Microbiol Methods 67, 212 219.
13. Koller, M., Bona, R., Braunegg, G., Hermann, C., Horvat, P., Kroutil, M., Martinz, J., Neto, J. et al. (2005) Production of polyhydroxyalkanoates from agricultural waste and surplus materials. Biomacromolecules 6, 561 565.
14. Langeveen, R.G., Huisman, G.W., Preusting, H., Ketelaar, P., Eggink, G. Witholt, B. (1988) Formation of polyesters by Pseudomonas oelovorans- effect of substrates on formation and composition of poly-(R)-3-hydroxyalkanoates and poly-(R)-3-hydroxyalkenoates. Appl Environ Microbiol 54, 2924 2932.
15. Mao Che, L., Andréfouët, S., Bothorel, V., Guezennec, M., Rougeaux, H., Guezennec, J., Deslandes, E., Trichet, J. et al. (2001) Physical, chemical and microbiological characteristics of microbial mats (KOPARA) in the South Pacific atolls of French Polynesia. Can J Microbiol 47, 994 1012.
16. Nichols, P.D., Guckert, J.B. White, D.C. (1986) Determination of monounsaturated fatty acid double bond position and geometry for microbial monocultures and complex consortia by capillary GC-MS of their dimethyldisulfur adducts. J Microbiol Methods 5, 49 55.
17. Raguénès, G.H.C., Perès, A., Ruimy, R., Pignet, P., Christen, R., Loaec, M., Rougeaux, H., Barbier, G. et al. (1997) Alteromonas infernus sp. nov., a new polysaccharide-producing bacterium isolated from a deep-sea hydrothermal vent. J Appl Microbiol 82, 422 430.
18. Raguénès, G., Moppert, X., Richert, L., Ratiskol, J., Payri, C., Costa, B. Guezennec, J. (2004) A novel exopolymer-producing bacterium, Paracoccus zeaxanthinifaciens subsp. payriae, isolated from a "kopara" mat located in Rangiroa, an atoll of French Polynesia. Curr Microbiol 49, 145 151.
19. Rougeaux, H., Guezennec, M., Mao Che, L., Payri, C., Deslandes, E. Guezennec, J. (2001) Microbial communities and exopolysaccharides from polynesian mats. Mar Biotechnol 3, 181 187.
20. Solaiman, D.K.Y., Ashby, R.D. Foglia, T.A. (2001) Production of polyhydroxyalkanoates from intact triacylglycerols by genetically engineered Pseudomonas. Appl Microbiol Biotechnol 56, 664 669.
21. Stackebrandt, E. Goebel, B.M. (1994) Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846 849.
22. Steinbüchel, A. Valentin, H.E. (1995) Diversity of bacterial polyhydroalkanoic acids. FEMS Microbiol Lett 128, 219 228.
23. Tsuge, T. (2002) Metabolic improvements and use of inexpensive carbon sources in microbial production of polyhydroxyalkanoates. J Biosci Bioeng 94, 579 584.
24. Wayne, L.G., Brenner, D.J., Colwell, R.R., Grimont, P.A.D., Kandler, O., Krichevesky, M.I., Moore, L.H., Murray, R.G.E. et al. (1987) Report of the Ad Hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463 464.