Evaluation of the IS6110 PCR assay for the rapid diagnosis of tuberculous meningitis

Cerebrospinal Fluid Research

Volumn 4, Issue , 2007, Pages

  Deshpande, Poonam S ^a   Kashyap, Rajpal S ^a   Ramteke, Sonali S ^a   Nagdev, Khushboo J ^a   Purohit, Hemant J ^b   Taori, Girdhar M ^a   Daginawala, Hatim F ^a  

^a CSIR CENTRAL INSTITUTE OF MEDICINAL AND AROMATIC PLANTS   (India)

^b Environmental Genomics Unit   (India)

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ARTICLE; BACTERIAL GENOME; BACTERIUM CULTURE; BACTERIUM DETECTION; CEREBROSPINAL FLUID ANALYSIS; CONTROLLED STUDY; GENE INSERTION SEQUENCE; HUMAN; MAJOR CLINICAL STUDY; MYCOBACTERIUM TUBERCULOSIS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SENSITIVITY AND SPECIFICITY; TUBERCULOUS MENINGITIS;

EID: 38349096764     PISSN: 17438454     EISSN: None     Source Type: Journal    
DOI: 10.1186/1743-8454-4-10     Document Type: Article

References (41)

1. Steinbrook R Tuberculosis and HIV in India New Eng J Med 2007, 356:1198-1199 10.1056/NEJMp078049 17377155
2. Kashyap RS Kainthla RP Satpute RM Agarwal NP Chandak NH Purohit HJ Taori GM Daginawala HF Differential diagnosis of tuberculous meningitis from partially treated pyogenic meningitis by cell ELISA BMC Neurology 2004, 4:16 529262 15498107 10.1186/1471-2377-4-16
3. Baker CA Cartwright CP Williams DN Nelson SM Peterson PK Early detection of central Nervous System Tuberculosis with the Gene-Probe Nucleic Acid amplification Assay: Utility in an Inner city hospital Clin Infec Di 2002, 35:339-342 10.1086/341494
4. Bonington AJI Strang G Klapper PE Use of Roche AMPLICOR Mycobacterium tuberculosis PCR in Early Diagnosis of Tuberculous Meningitis J Clin Microbiol 1998, 36:1251-1254 104809 9574686
5. Kulkarni SP Jaleel MA Kadival GV Evaluation of an in-house-developed PCR for the diagnosis of tuberculous meningitis in Indian children J Med Microbiol 2005, 54:369-373 10.1099/jmm.0.45801-0 15770022
6. Noordohek GT Kolk AHJ Sensitivity and Specificity of PCR for Detection of Mycobacterium tuberculosis: A Blind Comparison Study among Seven Laboratories J Clin Microbiol 1994, 32:277-284 263025 8150935
7. Sumi MG Mathai A Reuben S Sarada C Radhakrishnan VV Immunocytochemical Method for Early Laboratory Diagnosis of Tuberculous Meningitis Clin Diagn Lab Immunol 2002, 9:344-347 119925 11874875 10.1128/ CDLI.9.2.344-347.2002
8. Caws M Wilson SM Clough C Drobniewski F Role of IS6110-Targeted PCR, Culture, Biochemical, Clinical, and Immunological Criteria for Diagnosis of Tuberculous Meningitis Clin Microbiol 2000, 38:3150-3155
9. Chandramuki A Lyashchenko K Kumari HBV Khanna N Brusasca PN Gourie-Devi M Satishchandra P Shankar SK Ravi V Alcabes P Kanaujia GV Gennaro ML Detection of Antibody to Mycobacterium tuberculosis Protein Antigens in the Cerebrospinal Fluid of Patients with Tuberculous Meningitis J Infect Dis 2002, 186:678-683 10.1086/342293 12195355
10. Kashyap RS Kainthla RP Satpute RM Chandak NH Purohit HJ Taori GM Daginawala HF Demonstration of IgG antibodies to 30 Kd protein antigen in CSF for diagnosis of tuberculous meningitis by antibody-capturing ELISA Neurol Ind 2004, 52:359-362
11. Prasad R Kumar A Khanna BK Mukerji PK Agarwal SK Kumar A Srivastava VM Adenosine deaminase activity in CSF for diagnosis of tuberculosis meningitis Ind J Tub 1991, 38:99-102
12. Kashyap RS Kainthla RP Mudaliar AV Purohit HJ Taori GM Daginawala HF Cerebrospinal fluid adenosine deaminase activity: A complimentary tool in the early diagnosis of tuberculous meningitis Cerebrospinal Fluid Res 2006, 3:5 1448186 16571142 10.1186/1743-8454-3-5
13. Fresquet WC Haas J Wildemann B Storch HB Value of polymerase chain reaction (PCR) for diagnosis of tuberculoid meningitis Nervenarzt 1998, 69:502-506 10.1007/s001150050304 9673974
14. Rafi W Venkataswamy MM Ravi V Akepati C A comparative evaluation of in-house PCR assays involving three mycobacterial DNA sequences, IS6110, Rapid diagnosis of tuberculous meningitis: MPB-64 and 65 kDa antigen J Neurol Sci 2006, 252:163-168 10.1016/j.jns.2006.11.001 17182062
15. Brisson NA Aznar C Diagnosis of tuberculosis by DNA amplification in clinical practice evaluation Lancet 338:364-366 10.1016/ 0140-6736(91)90492-8 1677709
16. Eisenach KD Sifford MD Cave MD Bates JH Crawford JT Abstract Detection of Mycobacterium tuberculosis in sputum samples using a polymerase chain reaction Am Rev Resp Dis 1991, 144(5):1160-1163 1952448 1952448
17. Guilhot C Jackson M Gicquel B Mobile genetic elements and plasmids: tools for studies Mycobacteria, molecular biology and virulence Oxford: Blackwell Science Ratledge C, Dale J 1999, 17-37
18. Kennedy DH Fallon RJ Tuberculous meningitis JAMA 1979, 241:264-268 10.1001/jama.241.3.264 102806
19. Bhattacharya B Karak K Ghosal AG Roy A Das S Dandapat P Khetawat D Mondal DK Bhattacharya S Chakrabarti S Development of a new sensitive and efficient multiplex polymerase chain reaction (PCR) for identification and differentiation of different mycobacterial species Trop Med Intl Heal 2003, 8(2):151-157 12581441
20. Rafi W Venkataswamy MM Nagarathna S Satishchandra P Akepati C Role of an IS6110 Uniplex PCR in the diagnosis of tuberculous meningitis: Experience at a tertiary Neurocentre Int J Tub Lung Dis 2007, 11(2):209-214 17263293
21. Ndugga LK Cleeff MV Juma E Kimwomi J Githui W Oskam L Schuitema A Soolingen DV Nganga L Kibuga D Odhiambo J Klatser P Comparison of PCR with the Routine Procedure for Diagnosis of Tuberculosis in a Population with High Prevalence of Tuberculosis and Human Immunodeficiency Virus J Clin Microbiol 2004, 42:1012-1015 356878 15004046 10.1128/ JCM.42.3.1012-1015.2004
22. Clarridge JE Shawar RM Shinnick TM Plikaytis BB Large scale use of polymerase chain reaction for detection of Mycobacterium tuberculosis in a routine mycobacteriology laboratory J Clin Microbiol 1993, 31:2049-2056 265694 8370729
23. Shankar P Manjunath N Mohan KK Prasad K Behari M Shriniwas Ahuja GK Rapid diagnosis of tuberculous meningitis by polymerase chain reaction Lancet 1991, 335:5-7 10.1016/0140-6736(91)93328-7
24. Folgueria L Delgado R Palenque E Noriega AR Detection of Mycobacterium tuberculosis DNA in clinical samples by using simple lysis method and polymerase chain reaction J Clin Microbiol 1993, 72:126-133 8463383
25. Seth P Ahuja GK Bhanu NV Behari M Bhowmik S Broor S Dar L Chakraborty M Evaluation of polymerase chain reaction for rapid diagnosis of clinically suspected tuberculous meningitis Tub Lung Dis 1996, 77:353-357 10.1016/S0962-8479(96)90101-X
26. Rafi A Naghily B Efficiency of polymerase chain reaction for the diagnosis of tuberculosis meningitis Southeast Asian J Trop Med Pub Heal 2003, 34:357-360 12971562
27. Nguyen LN Kox LF Pham LD Kuijper S Kolk AH The potential contribution of the polymerase chain reaction to the diagnosis of tuberculosis meningitis Arch Neurol 1996, 8:771-776 8759984
28. Ahuja GK Mohan KK Prasad K Behari M Diagnostic criteria for tuberculous meningitis and their validation Tuber Lung Dis 1996, 75:149-152 10.1016/ 0962-8479(94)90045-0
29. Donald PR Victor TC Jordaan AM Schoeman JF Van Heldon PD Polymerase chain reaction in the diagnosis of tuberculosis meningitis Scand J Infect Dis 1993, 25:613-617 10.3109/00365549309008550 8284646
30. Sumi MG Mathai A Reuben S Sarda C Radhakrishnan VV Indulakshmi R A comparative evaluation of dot immunobinding assay (Dot-Iba) and polymerase chain reaction (PCR) for the laboratory diagnosis of tuberculous meningitis Diagn Microbiol Infect Dis 2003, 35:372-377 11821169
31. Soolingen DV Hass PE Hermans PW Gronen PM Embden JD Comparison of various repetitive DNA elements as genetic markers for strain differentiation and epidemiology of Mycobacterium tuberculosis J Clin Microbiol 1993, 31:1987-1995 265684 7690367
32. Das S Paramasivan CN Lowrie DB Prabhakar R Narayanan IS6110 restriction fragment length polymorphism typing of clinical isolates of Mycobacterium tuberculosis from patients with pulmonary tuberculosis in Madras, South India Tuber Lung Dis 1995, 76:550-554 10.1016/ 0962-8479(95)90533-2 8593378
33. Indulakshmi YK Manju R Kumar A Sathish M Implications of low frequency of IS1160 in fingerprinting field isolates of Mycobacterium tuberculosis from Kerala, India J Clin Microbiol 2001, 39:1683 88004 11354035 10.1128/ JCM.39.4.1683.2001
34. Dufaux MF Vanfleteren B Wit LD Vincke JP Van Vooren JP Yates MD Serruys E Content J Rapid detection of tuberculous and non-tuberculous mycobacteria by polymerase chain reaction amplification of a 162 bp DNA fragment from Antigen 85 Eur J Clin Microbiol Infect Dis 1992, 11:797-803 10.1007/BF01960878 1468418
35. Scarpellini P Racca S Clinque P Delfanti F Gianotti n Terreni MR Vago L Lazzarini A Nested polymerase chain reaction for diagnosis and monitoring treatment response in AIDS patients with tuberculous meningitis AIDS 1995, 1:885-890 7576324
36. Takahashi T Nakayama T Tamura M Ogawa K Tsuda H Morita M Hara M Togo M Shiota H Suzuki Y Minami M Ishikawa H Miki K Shikata E Takahashi S Kuragano T Matsumoto K Sawada S Mizutani T Nested polymerase chain reaction for assessing the clinical course of tuberculous meningitis Neurology 2005, 64:1789-1793 10.1212/01.WNL.0000162052.13838.B2 15911814
37. Liu PY Shi ZY Lau YJ Hu BS Rapid diagnosis of tuberculous meningitis by a simplified nested amplification protocol Neurology 1994, 44:1161-1164 8208416
38. Nguyen LN Kox LF Pham ID Kuijper S Kolk AH The potential contribution of the polymerase chain reaction to the diagnosis of tuberculous meningitis Arch Neurol 1996, 53:771-776 8759984
39. Marchandin H Ventura V Alonso JM Van de Perre P Mixed bacterial meningitis due to Streptococcus pneumoniae and Nesseria meningitides in an 18-month old child J Clin Microbiol 2005, 43:1477-1479 1081272 15750140 10.1128/JCM.43.3.1477-1479.2005
40. Huang PL Yeh SH Chiang CD Detection of Mycobacterium tuberculosis in sputum by polymerase chain reaction Chin Med J 1993, 52:332-337
41. Pai M Flores LL Pai N Hubbard A Riley LW Colford JM Diagnostic accuracy of nucleic acid amplification tests for tuberculous meningitis: A systematic review and meta-analysis Lancet Infect Dis 2003, 3:633-643 10.1016/S1473-3099(03)00772-2 14522262