-
1
-
-
0030797355
-
Robustness in simple biochemical networks
-
Barkai N., and Leibler S. Robustness in simple biochemical networks. Nature 387 (1997) 913
-
(1997)
Nature
, vol.387
, pp. 913
-
-
Barkai, N.1
Leibler, S.2
-
3
-
-
0034212551
-
Engineering stability in gene networks by autoregulation
-
Becskei A., and Serrano L. Engineering stability in gene networks by autoregulation. Nature 405 (2000) 590
-
(2000)
Nature
, vol.405
, pp. 590
-
-
Becskei, A.1
Serrano, L.2
-
4
-
-
0000188718
-
Highly optimized tolerance: robustness and design in complex systems
-
Carlson J.M., and Doyle J. Highly optimized tolerance: robustness and design in complex systems. Phys. Rev. Lett. 84 (2000) 2529
-
(2000)
Phys. Rev. Lett.
, vol.84
, pp. 2529
-
-
Carlson, J.M.1
Doyle, J.2
-
5
-
-
0034688174
-
Construction of a genetic toggle switch in Escherichia coli
-
Gardner T.S., Cantor C.R., and Collins J.J. Construction of a genetic toggle switch in Escherichia coli. Nature 403 (2000) 339
-
(2000)
Nature
, vol.403
, pp. 339
-
-
Gardner, T.S.1
Cantor, C.R.2
Collins, J.J.3
-
7
-
-
17144456808
-
Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion
-
Becskei A., Seraphin B., and Serrano L. Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion. EMBO J. 20 (2001) 2528
-
(2001)
EMBO J.
, vol.20
, pp. 2528
-
-
Becskei, A.1
Seraphin, B.2
Serrano, L.3
-
8
-
-
0036500993
-
Systems biology: a brief overview
-
Kitano H. Systems biology: a brief overview. Science 295 (2002) 1662
-
(2002)
Science
, vol.295
, pp. 1662
-
-
Kitano, H.1
-
9
-
-
0037079054
-
Computational systems biology
-
Kitano H. Computational systems biology. Nature 420 (2002) 206
-
(2002)
Nature
, vol.420
, pp. 206
-
-
Kitano, H.1
-
10
-
-
0347033256
-
Role of duplicate genes in genetic robustness against null mutations
-
Gu Z., Steinmetz L.M., Gu X., Scharfe C., Davis R.W., and Li W.H. Role of duplicate genes in genetic robustness against null mutations. Nature 421 (2003) 63
-
(2003)
Nature
, vol.421
, pp. 63
-
-
Gu, Z.1
Steinmetz, L.M.2
Gu, X.3
Scharfe, C.4
Davis, R.W.5
Li, W.H.6
-
11
-
-
7644238181
-
Biological robustness
-
Kitano H. Biological robustness. Nat. Rev. Genet. 5 (2004) 826
-
(2004)
Nat. Rev. Genet.
, vol.5
, pp. 826
-
-
Kitano, H.1
-
12
-
-
20744452513
-
A new measure of the robustness of biochemical networks
-
Chen B.S., Wang Y.C., Wu W.S., and Li W.H. A new measure of the robustness of biochemical networks. Bioinformatics 21 (2005) 2698
-
(2005)
Bioinformatics
, vol.21
, pp. 2698
-
-
Chen, B.S.1
Wang, Y.C.2
Wu, W.S.3
Li, W.H.4
-
13
-
-
0031879114
-
Stochastic kinetic analysis of developmental pathway bifurcation in phase λ-infected Escherichia coli cells
-
Arkin A., Ross J., and McAdams H.H. Stochastic kinetic analysis of developmental pathway bifurcation in phase λ-infected Escherichia coli cells. Genetics 149 (1998) 1633
-
(1998)
Genetics
, vol.149
, pp. 1633
-
-
Arkin, A.1
Ross, J.2
McAdams, H.H.3
-
14
-
-
0033083733
-
It's a noisy business! Genetic regulation at nanomolar scale
-
McAdams H.H., and Arkin A. It's a noisy business! Genetic regulation at nanomolar scale. Trends Genet. 15 (1999) 65
-
(1999)
Trends Genet.
, vol.15
, pp. 65
-
-
McAdams, H.H.1
Arkin, A.2
-
17
-
-
0037078982
-
Control, exploitation and tolerance of intracellular noise
-
Rao C.V., Wolf D.M., and Arkin A.P. Control, exploitation and tolerance of intracellular noise. Nature 420 (2002) 231
-
(2002)
Nature
, vol.420
, pp. 231
-
-
Rao, C.V.1
Wolf, D.M.2
Arkin, A.P.3
-
19
-
-
0034712843
-
Robust perfect adaptation in bacterial chemotaxis through feedback control
-
Yi T.M., Huang Y., Simon M.I., and Doyle J. Robust perfect adaptation in bacterial chemotaxis through feedback control. Proc. Natl. Acad. Sci. USA 97 (2000) 4649
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 4649
-
-
Yi, T.M.1
Huang, Y.2
Simon, M.I.3
Doyle, J.4
-
20
-
-
0006092502
-
Designer gene networks: towards fundamental cellular control
-
Hasty J., Isaacs F., Dolnik M., McMillen D., and Collins J.J. Designer gene networks: towards fundamental cellular control. Chaos 11 (2001) 207
-
(2001)
Chaos
, vol.11
, pp. 207
-
-
Hasty, J.1
Isaacs, F.2
Dolnik, M.3
McMillen, D.4
Collins, J.J.5
-
22
-
-
0002712756
-
Signal processing by biochemical reaction networks
-
Self-Organized Biological Dynamics and Nonlinear Control: Toward Understanding Complexity. Walleczek J. (Ed), Cambridge University, London
-
Arkin A. Signal processing by biochemical reaction networks. In: Walleczek J. (Ed). Self-Organized Biological Dynamics and Nonlinear Control: Toward Understanding Complexity. Chaos and Emergent Function in Living Systems (2000), Cambridge University, London 112
-
(2000)
Chaos and Emergent Function in Living Systems
, pp. 112
-
-
Arkin, A.1
-
26
-
-
0034691214
-
Stochastic focusing: fluctuation-enhanced sensitivity of intracellular regulation
-
Paulsson J., Berg O.G., and Ehrenberg M. Stochastic focusing: fluctuation-enhanced sensitivity of intracellular regulation. Proc. Natl. Acad. Sci. 97 (2000) 7148
-
(2000)
Proc. Natl. Acad. Sci.
, vol.97
, pp. 7148
-
-
Paulsson, J.1
Berg, O.G.2
Ehrenberg, M.3
-
30
-
-
33645813418
-
On the attenuation and amplification of molecular noise in genetic regulatory networks
-
Chen B.S., and Wang Y.C. On the attenuation and amplification of molecular noise in genetic regulatory networks. BMC Bioinformatics 7 (2006) 52
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 52
-
-
Chen, B.S.1
Wang, Y.C.2
-
31
-
-
0033005128
-
Metabolic engineering from a cybentic perspective
-
Varner J., and Ramkrishna D. Metabolic engineering from a cybentic perspective. Biotechnol. Prog. 15 (1999) 407
-
(1999)
Biotechnol. Prog.
, vol.15
, pp. 407
-
-
Varner, J.1
Ramkrishna, D.2
-
32
-
-
0037687416
-
Reverse engineering gene networks: integrating genetic perturbations with dynamic modeling
-
Tegner J., Yeung M.K., Hasty J., and Collins J.J. Reverse engineering gene networks: integrating genetic perturbations with dynamic modeling. Proc. Natl. Acad. Sci. USA 100 (2003) 5944
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 5944
-
-
Tegner, J.1
Yeung, M.K.2
Hasty, J.3
Collins, J.J.4
-
33
-
-
30044437327
-
Evolutionary programming as a platform for in silico metabolic engineering
-
Patil K.R., Rocha I., Forster J., and Nielsen J. Evolutionary programming as a platform for in silico metabolic engineering. BMC Bioinformatics 6 (2005) 308
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 308
-
-
Patil, K.R.1
Rocha, I.2
Forster, J.3
Nielsen, J.4
-
34
-
-
8744224466
-
OptStrain: a computational framework for redesign of microbial production systems
-
Pharkya P., Burgard A.P., and Maranas C.D. OptStrain: a computational framework for redesign of microbial production systems. Genome Res. 14 (2004) 2367
-
(2004)
Genome Res.
, vol.14
, pp. 2367
-
-
Pharkya, P.1
Burgard, A.P.2
Maranas, C.D.3
-
35
-
-
0034688173
-
A synthetic oscillatory network of transcriptional regulators
-
Elowitz M.B., and Leibler S. A synthetic oscillatory network of transcriptional regulators. Nature 403 (2000) 335
-
(2000)
Nature
, vol.403
, pp. 335
-
-
Elowitz, M.B.1
Leibler, S.2
-
36
-
-
1442306167
-
Design of artificial cell communication using gene and metabolic networks
-
Bulter T., Lee S.G., Wong W.W., Fung E., Connor M.R., and Liao J.C. Design of artificial cell communication using gene and metabolic networks. Proc. Natl. Acad. Sci. USA 101 (2004) 2299
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 2299
-
-
Bulter, T.1
Lee, S.G.2
Wong, W.W.3
Fung, E.4
Connor, M.R.5
Liao, J.C.6
-
37
-
-
0035578429
-
Design principles for elementary gene circuits: elements, methods, and examples
-
Savageau M.A. Design principles for elementary gene circuits: elements, methods, and examples. Chaos 11 (2001) 142
-
(2001)
Chaos
, vol.11
, pp. 142
-
-
Savageau, M.A.1
-
38
-
-
0036500834
-
Reverse engineering of biological complexity
-
Csete M.E., and Doyle J.C. Reverse engineering of biological complexity. Science 295 (2002) 1664
-
(2002)
Science
, vol.295
, pp. 1664
-
-
Csete, M.E.1
Doyle, J.C.2
-
39
-
-
0037366966
-
Design principles and operating principles: the yin and yang of optimal functioning
-
Voit E.O. Design principles and operating principles: the yin and yang of optimal functioning. Mathematical Bioscience 182 (2003) 81
-
(2003)
Mathematical Bioscience
, vol.182
, pp. 81
-
-
Voit, E.O.1
-
41
-
-
0003595806
-
-
SIAM, Philadelphia, PA
-
Boyd S., Ghaui L.E., Feron E., and Balakrishnan V. Linear Matrix Inequalities in System and Control Theory (1993), SIAM, Philadelphia, PA
-
(1993)
Linear Matrix Inequalities in System and Control Theory
-
-
Boyd, S.1
Ghaui, L.E.2
Feron, E.3
Balakrishnan, V.4
-
44
-
-
84889389880
-
-
Wiley-VCH, Berlin
-
Klipp E., Herwig R., Kowald A., Wierling C., and Leharch H. Systems Biology in Practice: Concepts, Implementation and Application (2005), Wiley-VCH, Berlin
-
(2005)
Systems Biology in Practice: Concepts, Implementation and Application
-
-
Klipp, E.1
Herwig, R.2
Kowald, A.3
Wierling, C.4
Leharch, H.5
-
46
-
-
0035487293
-
Recombineering: a powerful new tool for mouse functional genomics
-
Copeland N.G., Jenkins N.A., and Court D.L. Recombineering: a powerful new tool for mouse functional genomics. Nat. Rev. Genet. 2 (2001) 769
-
(2001)
Nat. Rev. Genet.
, vol.2
, pp. 769
-
-
Copeland, N.G.1
Jenkins, N.A.2
Court, D.L.3
-
48
-
-
0027320701
-
A turnover pathway for stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation
-
Decker C.J., and Parker R. A turnover pathway for stable and unstable mRNAs in yeast: evidence for a requirement for deadenylation. Genes Dev. 7 (1993) 1632
-
(1993)
Genes Dev.
, vol.7
, pp. 1632
-
-
Decker, C.J.1
Parker, R.2
-
49
-
-
0028095580
-
Mechanisms of mRNA degradation in eukaryotes
-
Decker C.J., and Parker R. Mechanisms of mRNA degradation in eukaryotes. Trends Biochem. Sci. 19 (1994) 336
-
(1994)
Trends Biochem. Sci.
, vol.19
, pp. 336
-
-
Decker, C.J.1
Parker, R.2
-
50
-
-
0029053016
-
Degradation of mRNA in eukaryotes
-
Beelman C.A., and Parker R. Degradation of mRNA in eukaryotes. Cell 81 (1995) 179
-
(1995)
Cell
, vol.81
, pp. 179
-
-
Beelman, C.A.1
Parker, R.2
-
51
-
-
0029871812
-
Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae
-
Caponigro G., and Parker P. Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae. Microbiol. Rev. 60 (1996) 233
-
(1996)
Microbiol. Rev.
, vol.60
, pp. 233
-
-
Caponigro, G.1
Parker, P.2
-
52
-
-
0032847421
-
Analysis of mRNA decay pathway in S. cerevisiae
-
He W., and Parker R. Analysis of mRNA decay pathway in S. cerevisiae. Methods 17 (1999) 3
-
(1999)
Methods
, vol.17
, pp. 3
-
-
He, W.1
Parker, R.2
-
53
-
-
0033790503
-
Mechanisms and control of mRNA decapping in Saccharomyces cerevisiae
-
Tucker M., and Parker R. Mechanisms and control of mRNA decapping in Saccharomyces cerevisiae. Annu. Rev. Biochem. 69 (2000) 571
-
(2000)
Annu. Rev. Biochem.
, vol.69
, pp. 571
-
-
Tucker, M.1
Parker, R.2
-
54
-
-
0036276986
-
Analyzing mRNA decay in Saccharomyces cerevisiae
-
Steiger M., and Parker R. Analyzing mRNA decay in Saccharomyces cerevisiae. Methods Enzymol. 351 (2002) 648
-
(2002)
Methods Enzymol.
, vol.351
, pp. 648
-
-
Steiger, M.1
Parker, R.2
|