메뉴 건너뛰기




Volumn 1, Issue 1, 2006, Pages

Rapid and highly informative diagnostic assay for H5N1 influenza viruses

Author keywords

[No Author keywords available]

Indexed keywords

HEMAGGLUTININ; INFLUENZA VIRUS HEMAGGLUTININ; PRIMER DNA; VIRUS DNA;

EID: 38149139168     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0000095     Document Type: Article
Times cited : (27)

References (38)
  • 1
    • 0033567144 scopus 로고    scopus 로고
    • Genetic characterization of the pathogenic influenza A/Goose/Guangdong/1/96 (H5N1) virus: Similarity of its hemagglutinin gene to those ofH5N1 viruses from the 1997 outbreaks in Hong Kong
    • Xu X, Subbarao, Cox NJ, Goo Y (1999) Genetic characterization of the pathogenic influenza A/Goose/Guangdong/1/96 (H5N1) virus: similarity of its hemagglutinin gene to those ofH5N1 viruses from the 1997 outbreaks in Hong Kong. Virology 261: 15-19.
    • (1999) Virology , vol.261 , pp. 15-19
    • Xu, X.1    Subbarao2    Cox, N.J.3    Goo, Y.4
  • 2
    • 14444284599 scopus 로고    scopus 로고
    • Characterization of an avian influenza A (H5N1) virus isolated from a child with a fatal respiratory illness
    • Subbarao K, Klimov A, Katz J, Regnery H, Lim W, et al. (1998) Characterization of an avian influenza A (H5N1) virus isolated from a child with a fatal respiratory illness. Science 279: 393-396.
    • (1998) Science , vol.279 , pp. 393-396
    • Subbarao, K.1    Klimov, A.2    Katz, J.3    Regnery, H.4    Lim, W.5
  • 3
    • 33750946430 scopus 로고    scopus 로고
    • Emergence and predominance ofan H5N1 influenza variant in China
    • Smith GJ, Fan XH, Wang J, Li KS, Qui K, et al. (2006) Emergence and predominance ofan H5N1 influenza variant in China. Proc Natl Acad Sci U S A 103:16936-16941.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 16936-16941
    • Smith, G.J.1    Fan, X.H.2    Wang, J.3    Li, K.S.4    Qui, K.5
  • 4
    • 54949083564 scopus 로고    scopus 로고
    • WHO (2005) World Health Organization Global Influenza Program Surveillance Network, Evolution of H5N1 avian influenza viruses in Asia, Emerg Infect Dis 11, 2005. (http://www.cdc.gov/ncidod/ eid/volllno10/pdfs/05-0644.pdf).
    • WHO (2005) World Health Organization Global Influenza Program Surveillance Network, "Evolution of H5N1 avian influenza viruses in Asia," Emerg Infect Dis 11, 2005. (http://www.cdc.gov/ncidod/ eid/volllno10/pdfs/05-0644.pdf).
  • 5
    • 22544445276 scopus 로고    scopus 로고
    • Characterization of a human H5N1 influenza A virus isolated in 2003
    • Shinya K, Hatta M, Yamada S, Takada A, Watanabe S, et al. (2005) Characterization of a human H5N1 influenza A virus isolated in 2003. J Virol 79: 9926-9932.
    • (2005) J Virol , vol.79 , pp. 9926-9932
    • Shinya, K.1    Hatta, M.2    Yamada, S.3    Takada, A.4    Watanabe, S.5
  • 6
    • 0036151373 scopus 로고    scopus 로고
    • Enhancing public health surveillance for influenza virus by incorporating newly available rapid diagnostic tests
    • Effler PV, Ieong MG, Tom T, Nakata M (2002) Enhancing public health surveillance for influenza virus by incorporating newly available rapid diagnostic tests. Emerg Infect Dis 8: 23-28.
    • (2002) Emerg Infect Dis , vol.8 , pp. 23-28
    • Effler, P.V.1    Ieong, M.G.2    Tom, T.3    Nakata, M.4
  • 7
    • 54949130290 scopus 로고    scopus 로고
    • Schmidt NJ, Emmons RW, American Public Health Association. Committee on Laboratory Standards and Practices (1989) Diagnostic procedures for viral, rickettsial, and chlamydial infections. Washington, DC: American Public Health Association. xv, 1225 p.p.
    • Schmidt NJ, Emmons RW, American Public Health Association. Committee on Laboratory Standards and Practices (1989) Diagnostic procedures for viral, rickettsial, and chlamydial infections. Washington, DC: American Public Health Association. xv, 1225 p.p.
  • 8
    • 3042556185 scopus 로고    scopus 로고
    • Rapid and sensitive method using multiplex real-time PCR for diagnosis of infections by influenza a and influenza B viruses, respiratory syncytial virus, and parainfluenza viruses 1, 2, 3, and 4
    • Templeton KE, Scheltinga SA, Beersma MF, Kroes AC, Claas EC (2004) Rapid and sensitive method using multiplex real-time PCR for diagnosis of infections by influenza a and influenza B viruses, respiratory syncytial virus, and parainfluenza viruses 1, 2, 3, and 4. J Clin Microbiol 42: 1564-1569.
    • (2004) J Clin Microbiol , vol.42 , pp. 1564-1569
    • Templeton, K.E.1    Scheltinga, S.A.2    Beersma, M.F.3    Kroes, A.C.4    Claas, E.C.5
  • 9
    • 0031866508 scopus 로고    scopus 로고
    • Rapid simultaneous diagnosis of infections with respiratory syncytial viruses A and B, influenza viruses A and B, and human parainfluenza virus types 1, 2,. and 3 by multiplex quantitative reverse transcription-polymerase chain reaction-enzyme hybridization assay (Hexaplex)
    • Fan J, Henrickson KJ, Savatski LL (1998) Rapid simultaneous diagnosis of infections with respiratory syncytial viruses A and B, influenza viruses A and B, and human parainfluenza virus types 1, 2,. and 3 by multiplex quantitative reverse transcription-polymerase chain reaction-enzyme hybridization assay (Hexaplex). Clin Infect Dis 26: 1397-1402.
    • (1998) Clin Infect Dis , vol.26 , pp. 1397-1402
    • Fan, J.1    Henrickson, K.J.2    Savatski, L.L.3
  • 11
    • 0042023536 scopus 로고    scopus 로고
    • Comparison of SmartCycler real-time reverse transcription-PCR assay in a public health laboratory with direct immunofluorescence and cell culture assays in a medical center for detection of influenza A virus
    • Habib-Bein NF, Beckwith WH 3rd, Mayo D, Landry ML (2003) Comparison of SmartCycler real-time reverse transcription-PCR assay in a public health laboratory with direct immunofluorescence and cell culture assays in a medical center for detection of influenza A virus. J Clin Microbiol 41: 3597-3601.
    • (2003) J Clin Microbiol , vol.41 , pp. 3597-3601
    • Habib-Bein, N.F.1    Beckwith 3rd, W.H.2    Mayo, D.3    Landry, M.L.4
  • 12
    • 84921707493 scopus 로고    scopus 로고
    • New laboratory assay for diagnostic testing of avian influenza A/H5 (Asian Lineage)
    • (CDC) CfDCaP (2006) New laboratory assay for diagnostic testing of avian influenza A/H5 (Asian Lineage). MMWR Moth Mortal Wkly Rep 10: 127.
    • (2006) MMWR Moth Mortal Wkly Rep , vol.10 , pp. 127
    • CfDCaP, C.D.C.1
  • 13
    • 0000545033 scopus 로고
    • Conn M, ed. Orlando, FL: Academic, p
    • Paulson JC (1985) The Receptors. Conn M, ed. Orlando, FL: Academic. 131-219 p.
    • (1985) The Receptors , pp. 131-219
    • Paulson, J.C.1
  • 14
    • 0027988832 scopus 로고
    • Receptor specificity in human, avian, and equine H2 and H3 influenza virus isolates
    • Connor RJ, Kawaoka Y, Webster RG, Paulson JC (1994) Receptor specificity in human, avian, and equine H2 and H3 influenza virus isolates. Virology 205: 17-23.
    • (1994) Virology , vol.205 , pp. 17-23
    • Connor, R.J.1    Kawaoka, Y.2    Webster, R.G.3    Paulson, J.C.4
  • 15
    • 0033856695 scopus 로고    scopus 로고
    • Early alterations of the receptor-binding properties of H1, H2, and H3 avian influenza virus hemagglutinins after their introduction into mammals
    • Matrosovich M, Tuzikov A, Bovin N, Gambaryan A, Klimov A, et al. (2000) Early alterations of the receptor-binding properties of H1, H2, and H3 avian influenza virus hemagglutinins after their introduction into mammals. J Virol 74: 8502-8512.
    • (2000) J Virol , vol.74 , pp. 8502-8512
    • Matrosovich, M.1    Tuzikov, A.2    Bovin, N.3    Gambaryan, A.4    Klimov, A.5
  • 16
    • 0036500549 scopus 로고    scopus 로고
    • H5 avian and H9 swine influenza virus haemagglutinin structures: Possible origin of influenza subtypes
    • Ha Y, Stevens DJ, Skehel JJ, Wiley DC (2002) H5 avian and H9 swine influenza virus haemagglutinin structures: possible origin of influenza subtypes. Embo J 21: 865-875.
    • (2002) Embo J , vol.21 , pp. 865-875
    • Ha, Y.1    Stevens, D.J.2    Skehel, J.J.3    Wiley, D.C.4
  • 17
    • 33645981586 scopus 로고    scopus 로고
    • Structure and receptor specificity of the hemagglutinin from an H5N1 influenza virus
    • Stevens J, Blixt O, Tumpicy TM, Taubenberger JK, Paulson JC, et al. (2006) Structure and receptor specificity of the hemagglutinin from an H5N1 influenza virus. Science 312: 404-410.
    • (2006) Science , vol.312 , pp. 404-410
    • Stevens, J.1    Blixt, O.2    Tumpicy, T.M.3    Taubenberger, J.K.4    Paulson, J.C.5
  • 18
    • 0031820967 scopus 로고    scopus 로고
    • The role of influenza A virus hemagglutinin residues 226 and 228 in receptor specificity and host range restriction
    • Vines A, Wells K, Matrosovich M, Castrucci MR, Ito T, et al. (1998) The role of influenza A virus hemagglutinin residues 226 and 228 in receptor specificity and host range restriction. J Virol 72: 7626-7631.
    • (1998) J Virol , vol.72 , pp. 7626-7631
    • Vines, A.1    Wells, K.2    Matrosovich, M.3    Castrucci, M.R.4    Ito, T.5
  • 19
    • 29444433087 scopus 로고    scopus 로고
    • Glycan microarray analysis of the hemagglutinins from modern and pandemic influenza viruses reveals different receptor specificities
    • Stevens J, Blixt O, Glaser L, Taubenberger JK, Palese P, et al. (2006) Glycan microarray analysis of the hemagglutinins from modern and pandemic influenza viruses reveals different receptor specificities. J Mol Biol 355: 1143--1155.
    • (2006) J Mol Biol , vol.355 , pp. 1143-1155
    • Stevens, J.1    Blixt, O.2    Glaser, L.3    Taubenberger, J.K.4    Palese, P.5
  • 21
    • 0141677672 scopus 로고    scopus 로고
    • Additional glycosylation at the receptor binding site of the hemagglutinin (HA) for H5 and H7 viruses may be an adaptation to poultry hosts, but does it influence pathogenicity?
    • Banks J, Plowright L (2003) Additional glycosylation at the receptor binding site of the hemagglutinin (HA) for H5 and H7 viruses may be an adaptation to poultry hosts, but does it influence pathogenicity? Avian Dis 47: 942-950.
    • (2003) Avian Dis , vol.47 , pp. 942-950
    • Banks, J.1    Plowright, L.2
  • 22
    • 0019513851 scopus 로고
    • Proteolytic cleavage of influenza virus hemagglutinins: Primary structure of the connecting peptide between RA1 and HA2 determines proteolytic cleavability and pathogenicity of Avian influenza viruses
    • Bosch FX, Garten W, Klenk HD, Rott R (1981) Proteolytic cleavage of influenza virus hemagglutinins: primary structure of the connecting peptide between RA1 and HA2 determines proteolytic cleavability and pathogenicity of Avian influenza viruses. Virology 113: 725-735.
    • (1981) Virology , vol.113 , pp. 725-735
    • Bosch, F.X.1    Garten, W.2    Klenk, H.D.3    Rott, R.4
  • 23
    • 0024521692 scopus 로고
    • Mutations at the cleavage site of the hemagglutinin after the pathogenicity of influenza virus A/chick/Penn/83 (H5N2)
    • Ohuchi M, Orlich M, Ohuchi R, Simpson BE, Garten W, et al. (1989) Mutations at the cleavage site of the hemagglutinin after the pathogenicity of influenza virus A/chick/Penn/83 (H5N2). Virology 168: 274-280.
    • (1989) Virology , vol.168 , pp. 274-280
    • Ohuchi, M.1    Orlich, M.2    Ohuchi, R.3    Simpson, B.E.4    Garten, W.5
  • 24
    • 0032540905 scopus 로고    scopus 로고
    • A sequencing method based on real-time pyrophosphate
    • Ronaghi M, Uhlen M, Nyren P (1998) A sequencing method based on real-time pyrophosphate. Science 281: 363, 365.
    • (1998) Science , vol.281 , Issue.363 , pp. 365
    • Ronaghi, M.1    Uhlen, M.2    Nyren, P.3
  • 25
    • 25844438380 scopus 로고    scopus 로고
    • Incidence of adamantane resistance among influenza A (H3N2) viruses isolated worldwide from 1994 to 2005: A cause for concern
    • Bright RA, Medina MJ, Xu X, Perez-Oronoz G, Wallis TR, et al. (2005) Incidence of adamantane resistance among influenza A (H3N2) viruses isolated worldwide from 1994 to 2005: a cause for concern. Lancet 366: 1175-1181.
    • (2005) Lancet , vol.366 , pp. 1175-1181
    • Bright, R.A.1    Medina, M.J.2    Xu, X.3    Perez-Oronoz, G.4    Wallis, T.R.5
  • 26
    • 33646252262 scopus 로고    scopus 로고
    • Sentinel-base DNA genotyping using multiple sequencing primers for high-risk human papillomaviruses
    • Gharizadeh B, Zheng B, Akhras M, Ghaderi M, Jejelowo O, et al. (2006) Sentinel-base DNA genotyping using multiple sequencing primers for high-risk human papillomaviruses. Mol Cell Probes 20: 230-238.
    • (2006) Mol Cell Probes , vol.20 , pp. 230-238
    • Gharizadeh, B.1    Zheng, B.2    Akhras, M.3    Ghaderi, M.4    Jejelowo, O.5
  • 27
    • 0031780665 scopus 로고    scopus 로고
    • Ubiquitin, EG-AP, and their role in p53 inactivation
    • Scheffner M (1998) Ubiquitin, EG-AP, and their role in p53 inactivation. Pharmacol Ther 78: 129-139.
    • (1998) Pharmacol Ther , vol.78 , pp. 129-139
    • Scheffner, M.1
  • 28
    • 3142579867 scopus 로고    scopus 로고
    • Genesis of a highly pathogenic and potentially pandemic H5N1 influenza virus in eastern Asia
    • Li KS, Guan Y, Wang J, Smith GJD, Xu KM, et al. (2004) Genesis of a highly pathogenic and potentially pandemic H5N1 influenza virus in eastern Asia. Nature 430: 209-213.
    • (2004) Nature , vol.430 , pp. 209-213
    • Li, K.S.1    Guan, Y.2    Wang, J.3    Smith, G.J.D.4    Xu, K.M.5
  • 29
    • 0033800590 scopus 로고    scopus 로고
    • Mapping of functional domains on the influenza A virus RNA polymerase PB2 molecule using monoclonal antibodies
    • Hatta M, Asano Y, Masunaga. K, Ito T, Okazaki K, et al. (2000) Mapping of functional domains on the influenza A virus RNA polymerase PB2 molecule using monoclonal antibodies. Arch Virol 145: 1947-1961.
    • (2000) Arch Virol , vol.145 , pp. 1947-1961
    • Hatta, M.1    Asano, Y.2    Masunaga, K.3    Ito, T.4    Okazaki, K.5
  • 30
    • 33645067624 scopus 로고    scopus 로고
    • Large-scale sequence analysis of avian influenza isolates
    • Obenauer JC, Denson J, Mehra PK, Su XP, Mukatira S, et al. (2006) Large-scale sequence analysis of avian influenza isolates. Science 311: 1576-1580.
    • (2006) Science , vol.311 , pp. 1576-1580
    • Obenauer, J.C.1    Denson, J.2    Mehra, P.K.3    Su, X.P.4    Mukatira, S.5
  • 31
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompison JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompison, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 32
    • 54949140107 scopus 로고    scopus 로고
    • Kendal AP, Pereira MS, Skehel JJ (1992) Hemaggluitination inhibition. p. B 17-35, In PMKendal AP, Skehel JJ, eds. Concepts and procedures for laboratory-based influenza surveillance. Centers for Disease Control and Prevention and Pan-American Health Organization, Atlanta.
    • Kendal AP, Pereira MS, Skehel JJ (1992) Hemaggluitination inhibition. p. B 17-35, In PMKendal AP, Skehel JJ, eds. Concepts and procedures for laboratory-based influenza surveillance. Centers for Disease Control and Prevention and Pan-American Health Organization, Atlanta.
  • 33
    • 0004188848 scopus 로고
    • Elements of information theory
    • 542 p.p
    • Cover TM, Thomas JA (1991) Elements of information theory. New York: Wiley. xxii, 542 p.p.
    • (1991) New York: Wiley , vol.22
    • Cover, T.M.1    Thomas, J.A.2
  • 34
    • 27744514327 scopus 로고    scopus 로고
    • Detection of gyrA mutations associated with ciprofloxacin resistance in Neisseria gonorrhoeae by rapid and reliable pre-programmed short DNA sequencing
    • Gharizadeh B, Akhras M, Unemo M, Wretlind B, Nyren P, et al. (2005) Detection of gyrA mutations associated with ciprofloxacin resistance in Neisseria gonorrhoeae by rapid and reliable pre-programmed short DNA sequencing. Int J Antimicrob Agents 26: 486-490.
    • (2005) Int J Antimicrob Agents , vol.26 , pp. 486-490
    • Gharizadeh, B.1    Akhras, M.2    Unemo, M.3    Wretlind, B.4    Nyren, P.5
  • 35
    • 54949092535 scopus 로고    scopus 로고
    • Cristianini N, Shawe-Taylor J (2000) An introduction to support vector machines and other kernel-based learning methods. Cambridge, U.K.; New York: Cambridge University Press. xiii, 189 p.
    • Cristianini N, Shawe-Taylor J (2000) An introduction to support vector machines and other kernel-based learning methods. Cambridge, U.K.; New York: Cambridge University Press. xiii, 189 p.
  • 37
    • 54949109881 scopus 로고    scopus 로고
    • Duda RO, Hart PE, Stork DG (2001) Pattern classification. New York, Chichester [England]: Wiley. xx, 654 p.p.
    • Duda RO, Hart PE, Stork DG (2001) Pattern classification. New York, Chichester [England]: Wiley. xx, 654 p.p.
  • 38
    • 54949118444 scopus 로고    scopus 로고
    • Meyer D (2006) Support Vector Machines. Technische Universiẗat Wien, Austria. pp. Interface to libsvm in package e1071.
    • Meyer D (2006) Support Vector Machines. Technische Universiẗat Wien, Austria. pp. Interface to libsvm in package e1071.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.