Inhibition of red seabream iridovirus (RSIV) replication by small interfering RNA (siRNA) in a cell culture system

Antiviral Research

Volumn 77, Issue 2, 2008, Pages 142-149

  Dang, Lua T ^a   Kondo, Hidehiro ^a   Hirono, Ikuo ^a   Aoki, Takashi ^a  

^a TOKYO UNIVERSITY OF MARINE SCIENCE AND TECHNOLOGY   (Japan)

Author keywords

Major capsid protein; MCP; Red seabream iridovirus; RNA interference (RNAi); RSIV; Small interfering RNA (siRNA)

Indexed keywords

SMALL INTERFERING RNA;

ANIMAL CELL; ARTICLE; CONCENTRATION RESPONSE; CONTROLLED STUDY; GENE EXPRESSION; GENETIC TRANSFECTION; IRIDOVIRUS; NONHUMAN; PLASMID; PRIORITY JOURNAL; RED SEABREAM IRIDOVIRUS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA INTERFERENCE; RNA SEQUENCE; SEA BREAM; VIRUS CULTURE; VIRUS INHIBITION;

ANIMALS; BASE SEQUENCE; CAPSID PROTEINS; CELL LINE; CELLS, CULTURED; IRIDOVIRUS; PLASMIDS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA INTERFERENCE; RNA, SMALL INTERFERING; SEA BREAM; TRANSFECTION; VIRUS REPLICATION;

IRIDOVIRUS; MIRIDAE; PAGRUS MAJOR;

EID: 38149045135     PISSN: 01663542     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.antiviral.2007.10.007     Document Type: Article

References (61)

1. Adelman Z.N., Sanchez-Vargas I., Travanty E.A., Carlson J.O., Beaty B.J., Blair C.D., and Olson K.E. RNA silencing of dengue virus type 2 replication in transformed C6/36 mosquito cells transcribing an inverted-repeat RNA derived from the virus genome. J. Virol. 76 (2002) 12925-12933
2. Agami R. RNAi and related mechanisms and their potential use for therapy. Curr. Opin. Chem. Biol. 6 (2002) 829-834
3. Andino R. RNAi puts a lid on virus replication. Nat. Biotechnol. 21 (2003) 629-630
4. Barton G.M., and Medzhitov R. Retroviral delivery of small interfering RNA into primary cells. Proc. Natl. Acad. Sci. U.S.A. 99 (2002) 14943-14945
5. Behlke M.A. Progress towards in vivo use of siRNAs. Mol. Ther. 13 (2006) 644-670
6. Bhuyan P.K., Kariko K., Capodici J., Lubinski J., Hook L.M., Friedman H.M., and Weissman D. Short interfering RNA-mediated inhibition of herpes simplex virus type 1 gene expression and function during infection of human keratinocytes. J. Virol. 78 (2004) 10276-10281
7. Caipang C.M., Hirono I., and Aoki T. Development of a real-time PCR assay for the detection and quantification of red sea bream Iridovirus (RSIV). Fish Pathol. 38 (2003) 1-7
8. Cao M., Ren H., Pan X., Pan W., and Qi Z.T. Inhibition of EGFP expression by siRNA in EGFP-stably expressing Huh-7 cells. J. Virol. Methods 119 (2004) 189-194
9. Caplen N.J., Zheng Z., Falgout B., and Morgan R.A. Inhibition of viral gene expression and replication in mosquito cells by dsRNA-triggered RNA interference. Mol. Ther. 6 (2002) 243-251
10. Capodici J., Kariko K., and Weissman D. Inhibition of HIV-1 infection by small interfering RNA-mediated RNA interference. J. Immunol. 169 (2002) 5196-5201
11. Carmichael G.G. Medicine: silencing viruses with RNA. Nature 418 (2002) 379-380
12. Clem L.W., Moewus L., and Sigel M.M. Studies with cells from marine fish in tissue culture. Proc. Soc. Exp. Biol. Med. 108 (1961) 762-766
13. Coburn G.A., and Cullen B.R. Potent and specific inhibition of human immunodeficiency virus type 1 replication by RNA interference. J. Virol. 76 (2002) 9225-9231
14. Colbere-Garapin F., Blondel B., Saulnier A., Pelletier I., and Labadie K. Silencing viruses by RNA interference. Microbes Infect. 7 (2005) 767-775
15. Dang Thi L., Yasuike M., Hirono I., Kondo H., and Aoki T. Transcriptional profile of red seabream iridovirus in a fish model as revealed by viral DNA microarrays. Virus Genes 35 (2007) 449-461
16. Do J.W., Moon C.H., Kim H.J., Ko M.S., Kim S.B., Son J.H., Kim J.S., An E.J., Kim M.K., Lee S.K., Han M.S., Cha S.J., Park M.S., Park M.A., Kim Y.C., Kim J.W., and Park J.W. Complete genomic DNA sequence of rock bream iridovirus. Virology 325 (2004) 351-363
17. Elbashir S.M., Harborth J., Lendeckel W., Yalcin A., Weber K., and Tuschl T. Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature 411 (2001) 494-498
18. Ferreira H.L., Spilki F.R., de Almeida R.S., Santos M.M., and Arns C.W. Inhibition of avian metapneumovirus (AMPV) replication by RNA interference targeting nucleoprotein gene (N) in cultured cells. Antiviral Res. 74 (2007) 77-81
19. Giladi H., Ketzinel-Gilad M., Rivkin L., Felig Y., Nussbaum O., and Galun E. Small interfering RNA inhibits hepatitis B virus replication in mice. Mol. Ther. 8 (2003) 769-776
20. Go J., Lancaster M., Deece K., Dhungyel O., and Whittington R. The molecular epidemiology of iridovirus in Murray cod (Maccullochella peelii peelii) and dwarf gourami (Colisa lalia) from distant biogeographical regions suggests a link between trade in ornamental fish and emerging iridoviral diseases. Mol. Cell. Probes 20 (2006) 212-222
21. Haasnoot P.C., Cupac D., and Berkhout B. Inhibition of virus replication by RNA interference. J. Biomed. Sci. 10 (2003) 607-616
22. Hall A.H., and Alexander K.A. RNA interference of human papillomavirus type 18 E6 and E7 induces senescence in HeLa cells. J. Virol. 77 (2003) 6066-6069
23. Huelsmann P.M., Rauch P., Allers K., John M.J., and Metzner K.J. Inhibition of drug-resistant HIV-1 by RNA interference. Antiviral Res. 69 (2006) 1-8
24. Imajoh M., Ikawa T., and Oshima S. Characterization of a new fibroblast cell line from a tail fin of red sea bream, Pagrus major, and phylogenetic relationships of a recent RSIV isolate in Japan. Virus Res. 126 (2007) 45-52
25. Inouye K., Yamano K., Maeno Y., Nakajima K., Matsuoka M., Wada Y., and Sorimachi M. Iridovirus infection of cultured red sea bream, Pargus major. Fish Pathol. 27 (1992) 19-27
26. Jia Q., and Sun R. Inhibition of gammaherpesvirus replication by RNA interference. J. Virol. 77 (2003) 3301-3306
27. Kapadia S.B., Brideau-Andersen A., and Chisari F.V. Interference of hepatitis C virus RNA replication by short interfering RNAs. Proc. Natl. Acad. Sci. U.S.A. 100 (2003) 2014-2018
28. Kasai H., and Yoshimizu M. Establishment of two Japanese flounder embryo cell lines. Bull. Fisheries Sci. Hokkaido Univ. 52 (2001) 67-70
29. Kawakami H., and Nakajima K. Cultured fish species affected by red sea bream iridoviral disease from 1996 to 2000. Fish Pathol. 37 (2002) 45-47
30. Kumar P., Wu H., McBride J.L., Jung K.E., Kim M.H., Davidson B.L., Lee S.K., Shankar P., and Manjunath N. Transvascular delivery of small interfering RNA to the central nervous system. Nature 448 (2007) 39-43
31. Kurita J., Nakajima K., Hirono I., and Aoki T. Complete genome sequencing of red sea bream Iridovirus (RSIV). Fisheries Sci. 68 Suppl. II (2002) 1113-1115
32. Leung R.K., and Whittaker P.A. RNA interference: from gene silencing to gene-specific therapeutics. Pharmacol. Ther. 107 (2005) 222-239
33. Livak K.J., and Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 25 (2001) 402-408
34. Lu L., Zhou S.Y., Chen C., Weng S.P., Chan S.M., and He J.G. Complete genome sequence analysis of an iridovirus isolated from the orange-spotted grouper, Epinephelus coioides. Virology 339 (2005) 81-100
35. Lua D.T., Yasuike M., Hirono I., and Aoki T. Transcription program of red sea bream iridovirus as revealed by DNA microarrays. J. Virol. 79 (2005) 15151-15164
36. Luo M.C., Zhang D.Q., Ma S.W., Huang Y.Y., Shuster S.J., Porreca F., and Lai J. An efficient intrathecal delivery of small interfering RNA to the spinal cord and peripheral neurons. Mol. Pain 1 (2005) 29
37. Mallanna S.K., Rasool T.J., Sahay B., Aleyas A.G., Ram H., Mondal B., Nautiyal B., Premraj A., Sreekumar E., and Yadav M.P. Inhibition of anatid herpes virus-1 replication by small interfering RNAs in cell culture system. Virus Res. 115 (2006) 192-197
38. Morris K.V., and Rossi J.J. Lentiviral-mediated delivery of siRNAs for antiviral therapy. Gene Ther. 13 (2006) 553-558
39. Morrissey D.V., Lockridge J.A., Shaw L., Blanchard K., Jensen K., Breen W., Hartsough K., Machemer L., Radka S., Jadhav V., Vaish N., Zinnen S., Vargeese C., Bowman K., Shaffer C.S., Jeffs L.B., Judge A., MacLachlan I., and Polisky B. Potent and persistent in vivo anti-HBV activity of chemically modified siRNAs. Nat. Biotechnol. 23 (2005) 1002-1007
40. Novina C.D., Murray M.F., Dykxhoorn D.M., Beresford P.J., Riess J., Lee S.K., Collman R.G., Lieberman J., Shankar P., and Sharp P.A. siRNA-directed inhibition of HIV-1 infection. Nat. Med. 8 (2002) 681-686
41. O'Brien L. Inhibition of multiple strains of Venezuelan equine encephalitis virus by a pool of four short interfering RNAs. Antiviral Res. 75 (2007) 20-29
42. Orba Y., Sawa H., Iwata H., Tanaka S., and Nagashima K. Inhibition of virus production in JC virus-infected cells by postinfection RNA interference. J. Virol. 78 (2004) 7270-7273
43. Palliser D., Chowdhury D., Wang Q.Y., Lee S.J., Bronson R.T., Knipe D.M., and Lieberman J. An siRNA-based microbicide protects mice from lethal herpes simplex virus 2 infection. Nature 439 (2006) 89-94
44. Radhakrishnan S., Gordon J., Del Valle L., Cui J., and Khalili K. Intracellular approach for blocking JC virus gene expression by using RNA interference during viral infection. J. Virol. 78 (2004) 7264-7269
45. Reed L.J., and Muench H. A simple method of estimating fifty percent end points. Am. J. Hyg. 27 (1938) 493-497
46. Schyth B.D., Lorenzen N., and Pedersen F.S. Antiviral activity of small interfering RNAs: specificity testing using heterologous virus reveals interferon-related effects overlooked by conventional mismatch controls. Virology 349 (2006) 134-141
47. Surabhi R.M., and Gaynor R.B. RNA interference directed against viral and cellular targets inhibits human immunodeficiency virus type 1 replication. J. Virol. 76 (2002) 12963-12973
48. Takada T., Nemoto K., Yamashita A., Kato M., Kondo Y., and Torii R. Efficient gene silencing and cell differentiation using siRNA in mouse and monkey ES cells. Biochem. Biophys. Res. Commun. 331 (2005) 1039-1044
49. Takeshita F., Minakuchi Y., Nagahara S., Honma K., Sasaki H., Hirai K., Teratani T., Namatame N., Yamamoto Y., Hanai K., Kato T., Sano A., and Ochiya T. Efficient delivery of small interfering RNA to bone-metastatic tumors by using atelocollagen in vivo. Proc. Natl. Acad. Sci. U.S.A. 102 (2005) 12177-12182
50. Tan F.L., and Yin J.Q. RNAi, a new therapeutic strategy against viral infection. Cell Res. 14 (2004) 460-466
51. Tirasophon W., Roshorm Y., and Panyim S. Silencing of yellow head virus replication in penaeid shrimp cells by dsRNA. Biochem. Biophys. Res. Commun. 334 (2005) 102-107
52. Tiscornia G., Singer O., Ikawa M., and Verma I.M. A general method for gene knockdown in mice by using lentiviral vectors expressing small interfering RNA. Proc. Natl. Acad. Sci. U.S.A. 100 (2003) 1844-1848
53. Wang C.S., Shih H.H., Ku C.C., and Chen S.N. Studies on epizootic iridovirus infection among red sea bream, Pagrus major (Temminck & Schlegel), cultured in Taiwan. J. Fish Dis. 26 (2003) 127-133
54. Wiebusch L., Truss M., and Hagemeier C. Inhibition of human cytomegalovirus replication by small interfering RNAs. J. Gen. Virol. 85 (2004) 179-184
55. Williams T. The iridoviruses. Adv. Virus Res. 46 (1996) 345-412
56. Wu K., Mu Y., Hu J., Lu L., Zhang X., Yang Y., Li Y., Liu F., Song D., Zhu Y., and Wu J. Simultaneously inhibition of HIV and HBV replication through a dual small interfering RNA expression system. Antiviral Res. 74 (2007) 142-149
57. Xie J., Lu L., Deng M., Weng S., Zhu J., Wu Y., Gan L., Chan S.M., and He J. Inhibition of reporter gene and Iridovirus-tiger frog virus in fish cell by RNA interference. Virology 338 (2005) 43-52
58. Xie F.Y., Woodle M.C., and Lu P.Y. Harnessing in vivo siRNA delivery for drug discovery and therapeutic development. Drug Discov. Today 11 (2006) 67-73
59. Yelina N.E., Savenkov E.I., Solovyev A.G., Morozov S.Y., and Valkonen J.P. Long-distance movement, virulence, and RNA silencing suppression controlled by a single protein in hordei- and potyviruses: complementary functions between virus families. J. Virol. 76 (2002) 12981-12991
60. Yoon J.S., Kim S.H., Shin M.C., Hong S.K., Jung Y.T., Khang I.G., Shin W.S., Kim C.C., and Paik S.Y. Inhibition of herpesvirus-6B RNA replication by short interference RNAs. J. Biochem. Mol. Biol. 37 (2004) 383-385
61. Zheng Z.M., Tang S., and Tao M. Development of resistance to RNAi in mammalian cells. Ann. N.Y. Acad. Sci. 1058 (2005) 105-118