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Volumn , Issue , 2005, Pages 370-375

Analysis and verification of qualitative models of genetic regulatory networks: A model-checking approach

Author keywords

[No Author keywords available]

Indexed keywords

ANALYSIS AND VERIFICATIONS; GENETIC REGULATORY NETWORKS; MODEL-CHECKING TECHNIQUES; NUTRITIONAL STRESS; QUALITATIVE MODEL; QUALITATIVE SIMULATION;

EID: 38149009818     PISSN: 10450823     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper
Times cited : (20)

References (24)
  • 2
    • 0031893742 scopus 로고    scopus 로고
    • Activation of Escherichia coli rRNA transcription by FIS during a growth cycle
    • J.A. Appleman, W. Ross, J. Salomon, and R.L. Gourse. Activation of E. coli rRNA transcription by Fis during a growth cycle. J. Bacteriol., 180(6):1525-32, 1998. (Pubitemid 28125738)
    • (1998) Journal of Bacteriology , vol.180 , Issue.6 , pp. 1525-1532
    • Appleman, J.A.1    Ross, W.2    Salomon, J.3    Gourse, R.L.4
  • 3
    • 0032716841 scopus 로고    scopus 로고
    • Growth phase-dependent variation in protein composition of the Escherichia coli nucleoid
    • T. Ali Azam, A. Iwata., A. Nishimura, S. Ueda, and A. Ishihama. Growth phase-dependent variation in protein composition of the E. coli nucleoid. J. Bacteriol., 181(20):6361-70, 1999. (Pubitemid 29512946)
    • (1999) Journal of Bacteriology , vol.181 , Issue.20 , pp. 6361-6370
    • Azam, T.A.1    Iwata, A.2    Nishimura, A.3    Ueda, S.4    Ishihama, A.5
  • 4
    • 35048822313 scopus 로고    scopus 로고
    • Analysis of genetic regulatory networks: A model-checking approach
    • G. Batt, H. de Jong, J. Geiselmann, and M. Page. Analysis of genetic regulatory networks: A model-checking approach. QR'03, 31-38. 2003.
    • (2003) QR'03 , pp. 31-38
    • Batt, G.1    De Jong, H.2    Geiselmann, J.3    Page, M.4
  • 5
    • 24344435117 scopus 로고    scopus 로고
    • Qualitative analysis and verification of hybrid models of genetic regulatory networks
    • HSCC'05, Springer
    • G. Batt, D. Ropers, H. de Jong, J. Geiselmann, M. Page, and D. Schneider. Qualitative analysis and verification of hybrid models of genetic regulatory networks. HSCC'05, LNCS 3414, 134-50. Springer, 2005.
    • (2005) LNCS , vol.3414 , pp. 134-150
    • Batt, G.1    Ropers, D.2    De Jong, H.3    Geiselmann, J.4    Page, M.5    Schneider, D.6
  • 6
    • 3042693879 scopus 로고    scopus 로고
    • Application of formal methods to biological regulatory networks: Extending Thomas' asynchronous logical approach with temporal logic
    • DOI 10.1016/j.jtbi.2004.04.003, PII S0022519304001444
    • G. Bernot, J.-P. Comet, A. Richard, and J. Guespin. A fruitful application of formal methods to biological regulatory networks: Extending Thomas' asynchronous logical approach with temporal logic. J. Theor. Biol., 229(3):339-47, 2004. (Pubitemid 38844938)
    • (2004) Journal of Theoretical Biology , vol.229 , Issue.3 , pp. 339-347
    • Bernot, G.1    Comet, J.-P.2    Richard, A.3    Guespin, J.4
  • 7
    • 0032392147 scopus 로고    scopus 로고
    • Focusing qualitative simulation using temporal logic
    • G. Brajnik and D.J. Clancy. Focusing qualitative simulation using temporal logic. Ann. Math. Artif. Intell., 22(1-2):59-86, 1998.
    • (1998) Ann. Math. Artif. Intell. , vol.22 , Issue.1-2 , pp. 59-86
    • Brajnik, G.1    Clancy, D.J.2
  • 9
    • 84937557946 scopus 로고    scopus 로고
    • NuSMV2: An open-source tool for symbolic model checking
    • CAV'02, Springer
    • A. Cimatti et al. NuSMV2: An open-source tool for symbolic model checking. CAV'02, LNCS 2404, 359-64. Springer, 2002.
    • (2002) LNCS , vol.2404 , pp. 359-364
    • Cimatti, A.1
  • 10
    • 85034858362 scopus 로고
    • Expressibility results for linear-time and branching-time logics
    • REX Workshop, Springer
    • E.M. Clarke and I.A. Draghicescu. Expressibility results for linear-time and branching-time logics. REX Workshop, LNCS 354, 428-37. Springer, 1988.
    • (1988) LNCS , vol.354 , pp. 428-437
    • Clarke, E.M.1    Draghicescu, I.A.2
  • 12
    • 0345269975 scopus 로고    scopus 로고
    • Genetic network analyzer: Qualitative simulation of genetic regulatory networks
    • DOI 10.1093/bioinformatics/btf851
    • H. de Jong, J. Geiselmann, C. Hernandez, and M. Page. Genetic Network Analyzer: Qualitative simulation of genetic regulatory networks. Bioinformatics, 19(3):336-44, 2003. (Pubitemid 36284933)
    • (2003) Bioinformatics , vol.19 , Issue.3 , pp. 336-344
    • De Jong, H.1    Geiselmann, J.2    Hernandez, C.3    Page, M.4
  • 13
    • 1242345225 scopus 로고    scopus 로고
    • Qualitative simulation of the initiation of sporulation in Bacillus subtilis
    • DOI 10.1016/j.bulm.2003.08.009
    • H. de Jong, J. Geiselmann, G. Batt, C. Hernandez, and M. Page. Qualitative simulation of the initiation of sporulation in B. subtilis. Bull. Math. Biol., 66(2):261-99, 2004. (Pubitemid 38225125)
    • (2004) Bulletin of Mathematical Biology , vol.66 , Issue.2 , pp. 261-299
    • De Jong, H.1    Geiselmann, J.2    Batt, G.3    Hernandez, C.4    Page, M.5
  • 14
    • 1242333310 scopus 로고    scopus 로고
    • Qualitative simulation of genetic regulatory networks using piecewise-linear models
    • DOI 10.1016/j.bulm.2003.08.010
    • H. de Jong, J.-L. Gouzé, C. Hernandez, M. Page, T. Sari, and J. Geiselmann. Qualitative simulation of genetic regulatory networks using piecewise-linear models. Bull. Math. Biol., 66(2):301-40, 2004. (Pubitemid 38215331)
    • (2004) Bulletin of Mathematical Biology , vol.66 , Issue.2 , pp. 301-340
    • De Jong, H.1    Gouze, J.-L.2    Hernandez, C.3    Page, M.4    Sari, T.5    Geiselmann, J.6
  • 15
    • 0015609281 scopus 로고
    • The logical analysis of continuous non-linear biochemical control networks
    • L. Glass and S.A. Kauffman. The logical analysis of continuous non-linear biochemical control networks. J. Theor. Biol., 39(1):103-29, 1973.
    • (1973) J. Theor. Biol. , vol.39 , Issue.1 , pp. 103-129
    • Glass, L.1    Kauffman, S.A.2
  • 16
    • 0036938728 scopus 로고    scopus 로고
    • A class of piecewise-linear differential equations arising in biological models
    • J.-L. Gouzé and T. Sari. A class of piecewise-linear differential equations arising in biological models. Dyn. Syst., 17(4):299-316, 2002.
    • (2002) Dyn. Syst. , vol.17 , Issue.4 , pp. 299-316
    • Gouzé, J.-L.1    Sari, T.2
  • 19
    • 0022343005 scopus 로고
    • Negative regulation of adenylate cyclase gene (cya) expression by cyclic AMP-cyclic AMP receptor protein in E. Coli
    • M. Kawamukai, J. Kishimoto, R. Utsumi, M. Himeno, T. Komano, and H. Aiba. Negative regulation of adenylate cyclase gene (cya) expression by cyclic AMP-cyclic AMP receptor protein in E. coli. J. Bacteriol., 164(2):872-77, 1985.
    • (1985) J. Bacteriol. , vol.164 , Issue.2 , pp. 872-877
    • Kawamukai, M.1    Kishimoto, J.2    Utsumi, R.3    Himeno, M.4    Komano, T.5    Aiba, H.6
  • 21
    • 29144514336 scopus 로고    scopus 로고
    • XTL: A meta-language and tool for temporal logic model-checking
    • R. Mateescu and H. Garavel. XTL: A meta-language and tool for temporal logic model-checking. STTT'98, 33-42, 1998.
    • (1998) STTT'98 , pp. 33-42
    • Mateescu, R.1    Garavel, H.2
  • 22
    • 0037332768 scopus 로고    scopus 로고
    • Efficient on-the-fly model-checking for regular alternation-free mu-calculus
    • DOI 10.1016/S0167-6423(02)00094-1, PII S0167642302000941
    • R. Mateescu and M. Sighireanu. Efficient on-the-fly model-checking for regular alternation-free mu-calculus. Sci. Comput. Program., 46(3):255-81, 2003. (Pubitemid 35349766)
    • (2003) Science of Computer Programming , vol.46 , Issue.3 , pp. 255-281
    • Mateescu, R.1    Sighireanu, M.2
  • 24
    • 0031144307 scopus 로고    scopus 로고
    • Proving properties of continuous systems: Qualitative simulation and temporal logic
    • B. Shults and B.J. Kuipers. Proving properties of continuous systems: Qualitative simulation and temporal logic. Artif. Intell., 92:91-130, 1997.
    • (1997) Artif. Intell. , vol.92 , pp. 91-130
    • Shults, B.1    Kuipers, B.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.