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Volumn 18, Issue 1, 2008, Pages 73-84

Transcription-coupled nucleotide excision repair in mammalian cells: Molecular mechanisms and biological effects

Author keywords

Chromatin remodelling; Cockayne syndrome; DNA damage; Nucleotide excision repair; Transcription; Transcription coupled repair

Indexed keywords

ERCC6 PROTEIN, HUMAN; ERCC8 PROTEIN, HUMAN; HELICASE; POLYDEOXYRIBONUCLEOTIDE SYNTHASE; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

EID: 38049178545     PISSN: 10010602     EISSN: 17487838     Source Type: Journal    
DOI: 10.1038/cr.2008.6     Document Type: Review
Times cited : (346)

References (94)
  • 1
    • 0037178748 scopus 로고    scopus 로고
    • Interfaces between the detection, signaling, and repair of DNA damage
    • Rouse J, Jackson SP. Interfaces between the detection, signaling, and repair of DNA damage. Science 2002; 297:547-551.
    • (2002) Science , vol.297 , pp. 547-551
    • Rouse, J.1    Jackson, S.P.2
  • 2
    • 4544259868 scopus 로고    scopus 로고
    • Transcription - guarding the genome by sensing DNA damage
    • Ljungman M, Lane DP. Transcription - guarding the genome by sensing DNA damage. Nat Rev Cancer 2004; 4:727-737.
    • (2004) Nat Rev Cancer , vol.4 , pp. 727-737
    • Ljungman, M.1    Lane, D.P.2
  • 3
    • 0023663101 scopus 로고
    • Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene
    • Mellon I, Spivak G, Hanawalt PC. Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene. Cell 1987; 51:241-249.
    • (1987) Cell , vol.51 , pp. 241-249
    • Mellon, I.1    Spivak, G.2    Hanawalt, P.C.3
  • 4
    • 0021905437 scopus 로고
    • DNA repair in an active gene: Removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall
    • Bohr VA, Smith CA, Okumoto DS, Hanawalt PC. DNA repair in an active gene: removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall. Cell 1985; 40:359-369.
    • (1985) Cell , vol.40 , pp. 359-369
    • Bohr, V.A.1    Smith, C.A.2    Okumoto, D.S.3    Hanawalt, P.C.4
  • 5
    • 32644450616 scopus 로고    scopus 로고
    • Molecular mechanisms of mammalian global genome nucleotide excision repair
    • Gillet LC, Schärer OD. Molecular mechanisms of mammalian global genome nucleotide excision repair. Chem Rev 2006; 6:253-276.
    • (2006) Chem Rev , vol.6 , pp. 253-276
    • Gillet, L.C.1    Schärer, O.D.2
  • 6
    • 0344874275 scopus 로고    scopus 로고
    • Effects of genomic context and chromatin structure on transcription-coupled and global genomic repair in mammalian cells
    • Feng Z, Hu W, Chasin LA, Tang MS. Effects of genomic context and chromatin structure on transcription-coupled and global genomic repair in mammalian cells. Nucleic Acids Res 2003; 31:5897-5906.
    • (2003) Nucleic Acids Res , vol.31 , pp. 5897-5906
    • Feng, Z.1    Hu, W.2    Chasin, L.A.3    Tang, M.S.4
  • 7
    • 0025820176 scopus 로고
    • Hierarchies of DNA repair in mammalian cells: Biological consequences
    • Mullenders LH, Vrieling H, Venema J, van Zeeland AA. Hierarchies of DNA repair in mammalian cells: biological consequences. Mutation Res 1991; 250:223-228.
    • (1991) Mutation Res , vol.250 , pp. 223-228
    • Mullenders, L.H.1    Vrieling, H.2    Venema, J.3    van Zeeland, A.A.4
  • 8
    • 0028948394 scopus 로고
    • Mammalian DNA nucleotide excision repair reconstituted with purified protein components
    • Aboussekhra A, Biggerstaff M, Shivji MK, et al. Mammalian DNA nucleotide excision repair reconstituted with purified protein components. Cell 1995; 80:859-868.
    • (1995) Cell , vol.80 , pp. 859-868
    • Aboussekhra, A.1    Biggerstaff, M.2    Shivji, M.K.3
  • 9
    • 0242605710 scopus 로고    scopus 로고
    • Nucleotide excision repair of DNA with recombinant human proteins : Definition of the minimal set of factors, active forms of TFIIH, and modulation by CAK
    • Araujo SJ, Tirode F, Coin F, et al. Nucleotide excision repair of DNA with recombinant human proteins : definition of the minimal set of factors, active forms of TFIIH, and modulation by CAK. Genes Dev 2000; 14:349-359.
    • (2000) Genes Dev , vol.14 , pp. 349-359
    • Araujo, S.J.1    Tirode, F.2    Coin, F.3
  • 10
    • 0035282109 scopus 로고    scopus 로고
    • A multistep damage recognition mechanism for global genomic nucleotide excision repair
    • Sugasawa K, Okamoto T, Shimizu Y, Masutani C, Iwai S, Hanaoka F. A multistep damage recognition mechanism for global genomic nucleotide excision repair. Genes Dev 2001; 15: 507-521.
    • (2001) Genes Dev , vol.15 , pp. 507-521
    • Sugasawa, K.1    Okamoto, T.2    Shimizu, Y.3    Masutani, C.4    Iwai, S.5    Hanaoka, F.6
  • 11
    • 17944361949 scopus 로고    scopus 로고
    • Sequential assembly of the nucleotide excision repair factors in vivo
    • Volker M, Moné MJ, Karmakar P, et al. Sequential assembly of the nucleotide excision repair factors in vivo. Mol Cell 2001; 8:213-224.
    • (2001) Mol Cell , vol.8 , pp. 213-224
    • Volker, M.1    Moné, M.J.2    Karmakar, P.3
  • 12
    • 0036606551 scopus 로고    scopus 로고
    • Sequential binding of UV DNA damage binding factor and degradation of the p48 subunit as early events after UV irradiation
    • Rapic-Otrin V, McLenigan MP, Bisi DC, Gonzalez M, Levine AS. Sequential binding of UV DNA damage binding factor and degradation of the p48 subunit as early events after UV irradiation. Nucleic Acids Res 2002; 30:2588-2598.
    • (2002) Nucleic Acids Res , vol.30 , pp. 2588-2598
    • Rapic-Otrin, V.1    McLenigan, M.P.2    Bisi, D.C.3    Gonzalez, M.4    Levine, A.S.5
  • 13
    • 16244423719 scopus 로고    scopus 로고
    • The UV-damaged DNA binding protein mediates efficient targeting of the nucleotide excision repair complex to UV-induced photo lesions
    • Moser J, Volker M, Kool H, et al. The UV-damaged DNA binding protein mediates efficient targeting of the nucleotide excision repair complex to UV-induced photo lesions. DNA Repair (Amst) 2005; 4:571-582.
    • (2005) DNA Repair (Amst) , vol.4 , pp. 571-582
    • Moser, J.1    Volker, M.2    Kool, H.3
  • 14
    • 0028360068 scopus 로고
    • Dual role of TFIIH in DNA excision repair and in transcription by RNA polymerase II
    • Drapkin R, Reardon JT, Ansari A, et al. Dual role of TFIIH in DNA excision repair and in transcription by RNA polymerase II. Nature 1994; 368:769-772.
    • (1994) Nature , vol.368 , pp. 769-772
    • Drapkin, R.1    Reardon, J.T.2    Ansari, A.3
  • 15
    • 0028912931 scopus 로고
    • The yeast TFB1 and SSL1 genes, which encode subunits of transcription factor IIH, are required for nucleotide excision repair and RNA polymerase II transcription
    • Wang Z, Buratowski S, Svejstrup JQ, et al. The yeast TFB1 and SSL1 genes, which encode subunits of transcription factor IIH, are required for nucleotide excision repair and RNA polymerase II transcription. Mol Cell Biol 1995; 15:2288-2293.
    • (1995) Mol Cell Biol , vol.15 , pp. 2288-2293
    • Wang, Z.1    Buratowski, S.2    Svejstrup, J.Q.3
  • 16
    • 34247513888 scopus 로고    scopus 로고
    • Distinct roles for the XPB/p52 and XPD/p44 subcomplexes of TFIIH in damaged DNA opening during nucleotide excision repair
    • Coin F, Oksenyeh V, Egly JM. Distinct roles for the XPB/p52 and XPD/p44 subcomplexes of TFIIH in damaged DNA opening during nucleotide excision repair. Mol Cell 2007; 26:245-256.
    • (2007) Mol Cell , vol.26 , pp. 245-256
    • Coin, F.1    Oksenyeh, V.2    Egly, J.M.3
  • 17
    • 0035796455 scopus 로고    scopus 로고
    • Double-check probing of DNA bending and unwinding by XPA-RPA: An architectural function in DNA repair
    • Missura M, Buterin T, Hindges R, et al. Double-check probing of DNA bending and unwinding by XPA-RPA: an architectural function in DNA repair. EMBO J 2001; 20:3554-3564.
    • (2001) EMBO J , vol.20 , pp. 3554-3564
    • Missura, M.1    Buterin, T.2    Hindges, R.3
  • 18
    • 0028085556 scopus 로고
    • XPG endonuclease makes the 3' incision in human DNA nucleotide excision repair
    • O'Donovan A, Davies AA, Moggs JG, West SC, Wood RD. XPG endonuclease makes the 3' incision in human DNA nucleotide excision repair. Nature 1994; 371:432-435.
    • (1994) Nature , vol.371 , pp. 432-435
    • O'Donovan, A.1    Davies, A.A.2    Moggs, J.G.3    West, S.C.4    Wood, R.D.5
  • 19
    • 16044373761 scopus 로고    scopus 로고
    • Xeroderma pigmentosum group F caused by a defect in a structure-specific DNA repair endonuclease
    • Sijbers AM, de Laat WL, Ariza RR, et al. Xeroderma pigmentosum group F caused by a defect in a structure-specific DNA repair endonuclease. Cell 1996; 86:811-822.
    • (1996) Cell , vol.86 , pp. 811-822
    • Sijbers, A.M.1    de Laat, W.L.2    Ariza, R.R.3
  • 20
    • 0031045565 scopus 로고    scopus 로고
    • PCNA: Structure, functions and interactions
    • Kelman Z. PCNA: structure, functions and interactions. Oncogene 1997; 14:629-640.
    • (1997) Oncogene , vol.14 , pp. 629-640
    • Kelman, Z.1
  • 21
    • 33744789415 scopus 로고    scopus 로고
    • The Y-family DNA polymerase kappa (pol kappa) functions in mammalian nucleotide-excision repair
    • Ogi T, Lehmann AR. The Y-family DNA polymerase kappa (pol kappa) functions in mammalian nucleotide-excision repair. Nat Cell Biol 2006; 8:640-642.
    • (2006) Nat Cell Biol , vol.8 , pp. 640-642
    • Ogi, T.1    Lehmann, A.R.2
  • 22
    • 34447302016 scopus 로고    scopus 로고
    • Sealing of chromosomal DNAnicks during nucleotide excision repair requires XRCC1 and DNA ligase III alpha in a cell-cycle-specific manner
    • Moser J, Kool H, Giakzidis I, Caldecott K, Mullenders LH, Fousteri MI. Sealing of chromosomal DNAnicks during nucleotide excision repair requires XRCC1 and DNA ligase III alpha in a cell-cycle-specific manner. Mol Cell 2007; 27:311-323.
    • (2007) Mol Cell , vol.27 , pp. 311-323
    • Moser, J.1    Kool, H.2    Giakzidis, I.3    Caldecott, K.4    Mullenders, L.H.5    Fousteri, M.I.6
  • 23
    • 0026670773 scopus 로고
    • Neither enhanced removal of cyclobutane pyrimidine dimers nor strand-specific repair is found after transcription induction of the beta 3-tubulin gene in a Drosophila embryonic cell line Kc
    • de Cock JG, Klink EC, Ferro W, Lohman PH, Eeken JC. Neither enhanced removal of cyclobutane pyrimidine dimers nor strand-specific repair is found after transcription induction of the beta 3-tubulin gene in a Drosophila embryonic cell line Kc. Mutation Res 1992;293:11-20.
    • (1992) Mutation Res , vol.293 , pp. 11-20
    • de Cock, J.G.1    Klink, E.C.2    Ferro, W.3    Lohman, P.H.4    Eeken, J.C.5
  • 24
    • 33845770385 scopus 로고    scopus 로고
    • Lack of strand-specific repair of UV-induced DNA lesions in three genes of the archaeon Sulfolobus solfataricus
    • Romano V, Napoli A, Salerno V, Valenti A, Rossi M, Ciaramella M. Lack of strand-specific repair of UV-induced DNA lesions in three genes of the archaeon Sulfolobus solfataricus. J Mol Biol 2007;365:921-929.
    • (2007) J Mol Biol , vol.365 , pp. 921-929
    • Romano, V.1    Napoli, A.2    Salerno, V.3    Valenti, A.4    Rossi, M.5    Ciaramella, M.6
  • 25
    • 0026354699 scopus 로고
    • Escherichia coli mfd mutant deficient in "mutation frequency decline" lacks strand-specific repair: In vitro complementation with purified coupling factor
    • Selby CP, Witkin EM, Sanear A. Escherichia coli mfd mutant deficient in "mutation frequency decline" lacks strand-specific repair: in vitro complementation with purified coupling factor. Proc Natl Acad Sci USA 1991; 88:11574-11578.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 11574-11578
    • Selby, C.P.1    Witkin, E.M.2    Sanear, A.3
  • 26
    • 34347332162 scopus 로고    scopus 로고
    • The molecular mechanism of transcription-coupled DNA repair
    • Savery NJ. The molecular mechanism of transcription-coupled DNA repair. Trends Microbiol 2007; 5:326-333.
    • (2007) Trends Microbiol , vol.5 , pp. 326-333
    • Savery, N.J.1
  • 27
    • 0028109412 scopus 로고
    • RAD26, the functional S. cerevisiae homolog of the Cockayne syndrome B gene ERCC6
    • van Gool AJ, Verhage R, Swagemakers SM, et al. RAD26, the functional S. cerevisiae homolog of the Cockayne syndrome B gene ERCC6. EMBO J 1994; 13:5361-5369.
    • (1994) EMBO J , vol.13 , pp. 5361-5369
    • van Gool, A.J.1    Verhage, R.2    Swagemakers, S.M.3
  • 28
    • 0037148786 scopus 로고    scopus 로고
    • A Rad26-Defl complex coordinates repair and RNA pol II proteolysis in response to DNA damage
    • Woudstra EC, Gilbert C, Fellows J, et al. A Rad26-Defl complex coordinates repair and RNA pol II proteolysis in response to DNA damage. Nature 2002; 415:929-933.
    • (2002) Nature , vol.415 , pp. 929-933
    • Woudstra, E.C.1    Gilbert, C.2    Fellows, J.3
  • 30
    • 0020066520 scopus 로고
    • Failure of RNA synthesis to recover after UV irradiation: An early defect in cells from individuals with Cockayne's syndrome and xeroderma pigmentosum
    • Mayne LV, Lehmann AR. Failure of RNA synthesis to recover after UV irradiation: an early defect in cells from individuals with Cockayne's syndrome and xeroderma pigmentosum. Cancer Res 1982; 42:1473-1478.
    • (1982) Cancer Res , vol.42 , pp. 1473-1478
    • Mayne, L.V.1    Lehmann, A.R.2
  • 31
    • 0029941444 scopus 로고    scopus 로고
    • The sensitivity of Cockayne's syndrome cells to DNA-damaging agents is not due to defective transcription-coupled repair of active genes
    • van Oosterwijk MF, Versteeg A, Filon R, van Zeeland AA, Mullenders LH. The sensitivity of Cockayne's syndrome cells to DNA-damaging agents is not due to defective transcription-coupled repair of active genes. Mol Cell Biol 1996; 8:4436-4444.
    • (1996) Mol Cell Biol , vol.8 , pp. 4436-4444
    • van Oosterwijk, M.F.1    Versteeg, A.2    Filon, R.3    van Zeeland, A.A.4    Mullenders, L.H.5
  • 32
    • 0037031218 scopus 로고    scopus 로고
    • Ultraviolet-sensitive syndrome cells are defective in transcription-coupled repair of cyclobutane pyrimidine dimmers
    • Spivak G, Itoh T, Matsunaga T, Nikaido O, Hanawalt P, Yamaizumi M. Ultraviolet-sensitive syndrome cells are defective in transcription-coupled repair of cyclobutane pyrimidine dimmers. DNA Repair (Amst) 2002; 1:629-643.
    • (2002) DNA Repair (Amst) , vol.1 , pp. 629-643
    • Spivak, G.1    Itoh, T.2    Matsunaga, T.3    Nikaido, O.4    Hanawalt, P.5    Yamaizumi, M.6
  • 33
    • 7444226812 scopus 로고    scopus 로고
    • Complete absence of Cockayne syndrome group B gene product gives rise to UV-sensitive syndrome but not Cockayne syndrome
    • Horibata K, Iwamoto Y, Kuraoka I, et al. Complete absence of Cockayne syndrome group B gene product gives rise to UV-sensitive syndrome but not Cockayne syndrome. Proc Natl Acad Sci USA 2004; 101:15410- 15415.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 15410-15415
    • Horibata, K.1    Iwamoto, Y.2    Kuraoka, I.3
  • 34
    • 0033806183 scopus 로고    scopus 로고
    • ATP-dependent chromatin remodeling by the Cockayne syndrome B DNA repair-transcription- coupling factor
    • Citterio E, van den Boom V, Schnitzler G, et al. ATP-dependent chromatin remodeling by the Cockayne syndrome B DNA repair-transcription- coupling factor. Mol Cell Biol 2000; 20:7643-7653.
    • (2000) Mol Cell Biol , vol.20 , pp. 7643-7653
    • Citterio, E.1    van den Boom, V.2    Schnitzler, G.3
  • 35
    • 33745460647 scopus 로고    scopus 로고
    • Cockayne syndrome group B protein (CSB) plays a general role in chromatin maintenance and remodeling
    • Newman JC, Bailey AD, Weiner AM. Cockayne syndrome group B protein (CSB) plays a general role in chromatin maintenance and remodeling. Proc Natl Acad Sci USA 2006; 103:9613-9618.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 9613-9618
    • Newman, J.C.1    Bailey, A.D.2    Weiner, A.M.3
  • 36
    • 0031020871 scopus 로고    scopus 로고
    • Human transcription-repair coupling factor CSB/ERCC6 is a DNA- stimulated ATPase but is not a helicase and does not disrupt the ternary transcription complex of stalled RNA polymerase II
    • Selby CP, Sancar A. Human transcription-repair coupling factor CSB/ERCC6 is a DNA- stimulated ATPase but is not a helicase and does not disrupt the ternary transcription complex of stalled RNA polymerase II. J Biol Chem 1997; 272:1885-1890.
    • (1997) J Biol Chem , vol.272 , pp. 1885-1890
    • Selby, C.P.1    Sancar, A.2
  • 37
    • 33646589650 scopus 로고    scopus 로고
    • Cockayne syndrome B protein regulates the transcriptional program after UV irradiation
    • Proietti-De-Santis L, Drané P, Egly JM. Cockayne syndrome B protein regulates the transcriptional program after UV irradiation. EMBO J 2006; 25:1915-1923.
    • (2006) EMBO J , vol.25 , pp. 1915-1923
    • Proietti-De-Santis, L.1    Drané, P.2    Egly, J.M.3
  • 38
    • 34247256517 scopus 로고    scopus 로고
    • XPG stabilizes TFIIH, allowing transactivation of nuclear receptors: Implications for Cockayne syndrome in XP-G/CS patients
    • Ito S, Kuraoka I, Chymkowitch P, et al. XPG stabilizes TFIIH, allowing transactivation of nuclear receptors: Implications for Cockayne syndrome in XP-G/CS patients. Mol Cell 2007; 26:231-243.
    • (2007) Mol Cell , vol.26 , pp. 231-243
    • Ito, S.1    Kuraoka, I.2    Chymkowitch, P.3
  • 39
    • 0029088143 scopus 로고
    • The Cockayne syndrome group a gene encodes a WD repeat protein that interacts with CSB protein and a subunit of RN A polymerase II TFIIH
    • Henning KA, Li L, Iyer N, et al. The Cockayne syndrome group a gene encodes a WD repeat protein that interacts with CSB protein and a subunit of RN A polymerase II TFIIH. Cell 1995; 82:555-564.
    • (1995) Cell , vol.82 , pp. 555-564
    • Henning, K.A.1    Li, L.2    Iyer, N.3
  • 40
    • 0037509859 scopus 로고    scopus 로고
    • The ubiquitin ligase activity in the DDB2 and CSA complexes is differentially regulated by the COP9 signalosome in response to DNA damage
    • Groisman R, Polanowska J, Kuraoka I, et al. The ubiquitin ligase activity in the DDB2 and CSA complexes is differentially regulated by the COP9 signalosome in response to DNA damage. Cell 2003; 113:357-367.
    • (2003) Cell , vol.113 , pp. 357-367
    • Groisman, R.1    Polanowska, J.2    Kuraoka, I.3
  • 41
    • 33747194740 scopus 로고    scopus 로고
    • Cockayne syndrome A and B proteins differentially regulate recruitment of chromatin remodeling and repair factors to stalled RNA polymerase II in vivo
    • Fousteri M, Vermeulen W, van Zeeland AA, Mullenders LH. Cockayne syndrome A and B proteins differentially regulate recruitment of chromatin remodeling and repair factors to stalled RNA polymerase II in vivo. Mol Cell 2006; 23:471-482.
    • (2006) Mol Cell , vol.23 , pp. 471-482
    • Fousteri, M.1    Vermeulen, W.2    van Zeeland, A.A.3    Mullenders, L.H.4
  • 42
    • 0034634570 scopus 로고    scopus 로고
    • XAB2, a novel tetracopeptide repeat protein involved in transcription-coupled DNA repair and transcription
    • Nakatsu Y, Asahina H, Citterio E, et al. XAB2, a novel tetracopeptide repeat protein involved in transcription-coupled DNA repair and transcription. J Biol Chem 2000; 45:34931-34937.
    • (2000) J Biol Chem , vol.45 , pp. 34931-34937
    • Nakatsu, Y.1    Asahina, H.2    Citterio, E.3
  • 43
    • 38149086154 scopus 로고    scopus 로고
    • Isolation of XAB2 complex involved in pre-mRNA splicing, transcription and transcription-coupled repair
    • Nov 2; 10.1074/jbc.M706647200
    • Kuraoka I, Ito S, Wada T, et al. Isolation of XAB2 complex involved in pre-mRNA splicing, transcription and transcription-coupled repair. J Biol Chem 2007 Nov 2; 10.1074/jbc.M706647200.
    • (2007) J Biol Chem
    • Kuraoka, I.1    Ito, S.2    Wada, T.3
  • 44
  • 45
    • 0035399963 scopus 로고    scopus 로고
    • Chromatin unfolding and activation by HMGN1 chromosomal proteins
    • Bustin M. Chromatin unfolding and activation by HMGN1 chromosomal proteins. Trends Biochem Sci 2001; 26:431-437.
    • (2001) Trends Biochem Sci , vol.26 , pp. 431-437
    • Bustin, M.1
  • 46
    • 27144452299 scopus 로고    scopus 로고
    • Chromosomal protein HMGN1 enhances the acetylation of lysine 14 in histone H3
    • Lim JH, West KL, Rubinstein Y, Bergel M, Postnikov YV, Bustin M. Chromosomal protein HMGN1 enhances the acetylation of lysine 14 in histone H3. EMBO J 2005; 17:3038-3048.
    • (2005) EMBO J , vol.17 , pp. 3038-3048
    • Lim, J.H.1    West, K.L.2    Rubinstein, Y.3    Bergel, M.4    Postnikov, Y.V.5    Bustin, M.6
  • 47
    • 0037389942 scopus 로고    scopus 로고
    • Chromosomal protein HMGN1 enhances the rate of DNA repair in chromatin
    • Birger Y, West KL, Postnikov YV, et al. Chromosomal protein HMGN1 enhances the rate of DNA repair in chromatin. EMBO J 2003; 22:1665-1675.
    • (2003) EMBO J , vol.22 , pp. 1665-1675
    • Birger, Y.1    West, K.L.2    Postnikov, Y.V.3
  • 48
    • 0037378557 scopus 로고    scopus 로고
    • Transcription- dependent degradation of topoisomerase I-DNA covalent complexes
    • Desai SD, Zhang H, Rodriguez-Bauman A, et al. Transcription- dependent degradation of topoisomerase I-DNA covalent complexes. Mol Cell Biol 2003; 23:2341-2350.
    • (2003) Mol Cell Biol , vol.23 , pp. 2341-2350
    • Desai, S.D.1    Zhang, H.2    Rodriguez-Bauman, A.3
  • 49
    • 0032565507 scopus 로고    scopus 로고
    • Transcription coupled repair and its impact on mutagenesis
    • Vrieling H, van Zeeland AA, Mullenders LH. Transcription coupled repair and its impact on mutagenesis. Mutation Res 1998; 400:135-142.
    • (1998) Mutation Res , vol.400 , pp. 135-142
    • Vrieling, H.1    van Zeeland, A.A.2    Mullenders, L.H.3
  • 50
    • 0342652735 scopus 로고
    • Repair of N-methylpurines in specific DNA sequences in Chinese hamster ovary cells: Absence of strand specificity in the dihydrofolate reductase gene
    • Scicchitano DA, Hanawalt PC. Repair of N-methylpurines in specific DNA sequences in Chinese hamster ovary cells: absence of strand specificity in the dihydrofolate reductase gene. Proc Natl Acad Sci USA 1989; 9:3050-3054.
    • (1989) Proc Natl Acad Sci USA , vol.9 , pp. 3050-3054
    • Scicchitano, D.A.1    Hanawalt, P.C.2
  • 51
    • 0035231287 scopus 로고    scopus 로고
    • Repair of 8-oxoguanine and Ogg1-incised apurinic sites in a CHO cell line
    • Boiteux S, le Page F. Repair of 8-oxoguanine and Ogg1-incised apurinic sites in a CHO cell line. Prog Nucleic Acid Res Mol Biol 2001; 68:95-105.
    • (2001) Prog Nucleic Acid Res Mol Biol , vol.68 , pp. 95-105
    • Boiteux, S.1    le Page, F.2
  • 52
    • 0037193542 scopus 로고    scopus 로고
    • Repair of 8-oxoG is slower in endogenous nuclear genes than in mitochondrial DNA and is without strand bias
    • Thorslund T, Sunesen M, Bohr VA, Stevnsner T. Repair of 8-oxoG is slower in endogenous nuclear genes than in mitochondrial DNA and is without strand bias. DNA Repair (Amst) 2002; 1:261-273.
    • (2002) DNA Repair (Amst) , vol.1 , pp. 261-273
    • Thorslund, T.1    Sunesen, M.2    Bohr, V.A.3    Stevnsner, T.4
  • 53
    • 2442504817 scopus 로고    scopus 로고
    • Single-stranded breaks in DNA but not oxidative DNA base damages block transcriptional elongation by RNA polymerase II in HeLa cell nuclear extracts
    • Kathe SD, Shen GP, Wallace SS. Single-stranded breaks in DNA but not oxidative DNA base damages block transcriptional elongation by RNA polymerase II in HeLa cell nuclear extracts. J Biol Chem 2004; 279:18511-18520.
    • (2004) J Biol Chem , vol.279 , pp. 18511-18520
    • Kathe, S.D.1    Shen, G.P.2    Wallace, S.S.3
  • 54
    • 0032738023 scopus 로고    scopus 로고
    • Effect of DNA lesions on transcription elongation
    • Tornaletti S, Hanawalt PC. Effect of DNA lesions on transcription elongation. Biochimie 1999; 81:139-146.
    • (1999) Biochimie , vol.81 , pp. 139-146
    • Tornaletti, S.1    Hanawalt, P.C.2
  • 56
    • 29244483920 scopus 로고    scopus 로고
    • Host cell reactivation of plasmids containing oxidative DNA lesions is defective in Cockayne syndrome but normal in UV-sensitive syndrome fibroblasts
    • Spivak G, Hanawalt PC. Host cell reactivation of plasmids containing oxidative DNA lesions is defective in Cockayne syndrome but normal in UV-sensitive syndrome fibroblasts. DNA Repair (Amst) 2006; 5:13-22.
    • (2006) DNA Repair (Amst) , vol.5 , pp. 13-22
    • Spivak, G.1    Hanawalt, P.C.2
  • 57
    • 18744368449 scopus 로고    scopus 로고
    • Osterod M, Larsen E, le Page E, et al. A global DNA repair mechanism involving the Cockayne syndrome B (CSB) gene product can prevent the in vivo accumulation of endogenous oxidative DNA base damage. Oncogene 2002; 21:8232-8239.
    • Osterod M, Larsen E, le Page E, et al. A global DNA repair mechanism involving the Cockayne syndrome B (CSB) gene product can prevent the in vivo accumulation of endogenous oxidative DNA base damage. Oncogene 2002; 21:8232-8239.
  • 58
    • 0344614604 scopus 로고    scopus 로고
    • The ATPase domain but not the acidic region of Cockayne syndrome group B gene product is essential for DNArepair
    • Brosh RM Jr, Balajee AS, Selzer RR, Sunesen M, Proietti de Santis L, Bohr VA. The ATPase domain but not the acidic region of Cockayne syndrome group B gene product is essential for DNArepair. Mol Biol Cell 1999; 10:3583-3594.
    • (1999) Mol Biol Cell , vol.10 , pp. 3583-3594
    • Brosh Jr, R.M.1    Balajee, A.S.2    Selzer, R.R.3    Sunesen, M.4    Proietti de Santis, L.5    Bohr, V.A.6
  • 59
    • 0034641753 scopus 로고    scopus 로고
    • UV-induced inhibition of transcription involves repression of transcription initiation and phosphorylation of RNA polymerase II
    • Rockx D, Mason R, van Hoffen A, et al. UV-induced inhibition of transcription involves repression of transcription initiation and phosphorylation of RNA polymerase II. Proc Natl Acad Sci USA 2000; 97:10503-10508.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 10503-10508
    • Rockx, D.1    Mason, R.2    van Hoffen, A.3
  • 60
    • 0033590624 scopus 로고    scopus 로고
    • Inhibition of RNA polymerase II as a trigger for the p53 response
    • Ljungman M, Zhang F, Chen F, Rainbow AJ, McKay BC. Inhibition of RNA polymerase II as a trigger for the p53 response. Oncogene 1999; 18:583-592.
    • (1999) Oncogene , vol.18 , pp. 583-592
    • Ljungman, M.1    Zhang, F.2    Chen, F.3    Rainbow, A.J.4    McKay, B.C.5
  • 61
    • 12944300387 scopus 로고    scopus 로고
    • Differential role of transcription-coupled repair in UVB-induced G2 arrest and apoptosis in mouse epidermis
    • van Oosten M, Rebel H, Friedberg EC, et al. Differential role of transcription-coupled repair in UVB-induced G2 arrest and apoptosis in mouse epidermis. Proc Natl Acad Sci USA 2000; 97:11268-11273.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 11268-11273
    • van Oosten, M.1    Rebel, H.2    Friedberg, E.C.3
  • 62
    • 0035820074 scopus 로고    scopus 로고
    • UV light-induced degradation of RNA polymerase II is dependent on the Cockayne's syndrome A and B proteins but not p53 or MLH1
    • McKay BC, Chen F, Clarke ST, Wiggin HE, Harley LM, Ljungman M. UV light-induced degradation of RNA polymerase II is dependent on the Cockayne's syndrome A and B proteins but not p53 or MLH1. Mutation Res 2001; 485:93-105.
    • (2001) Mutation Res , vol.485 , pp. 93-105
    • McKay, B.C.1    Chen, F.2    Clarke, S.T.3    Wiggin, H.E.4    Harley, L.M.5    Ljungman, M.6
  • 63
    • 0031920594 scopus 로고    scopus 로고
    • Defective global genome repair in XPC mice is associated with skin cancer susceptibility but not with sensitivity to UVB induced erythema and edema
    • Berg RJ, Ruven HJ, Sands AT, de Gruijl FR, Mullenders LH. Defective global genome repair in XPC mice is associated with skin cancer susceptibility but not with sensitivity to UVB induced erythema and edema. J Invest Dermatol 1998; 110:405-409.
    • (1998) J Invest Dermatol , vol.110 , pp. 405-409
    • Berg, R.J.1    Ruven, H.J.2    Sands, A.T.3    de Gruijl, F.R.4    Mullenders, L.H.5
  • 64
    • 28544434877 scopus 로고    scopus 로고
    • Enhanced DDB2 expression protects mice from carcinogenic effects of chronic UV-B irradiation
    • Alekseev S, Kool H, Rebel H, et al. Enhanced DDB2 expression protects mice from carcinogenic effects of chronic UV-B irradiation. Cancer Res 2005; 65:10298-10306.
    • (2005) Cancer Res , vol.65 , pp. 10298-10306
    • Alekseev, S.1    Kool, H.2    Rebel, H.3
  • 67
    • 7144251887 scopus 로고    scopus 로고
    • XPA-deficiency in hairless mice causes a shift in skin tumor types and mutational target genes after exposure to low doses of UVB
    • de Vries A, Berg RJW, Wijnhoven S, et al. XPA-deficiency in hairless mice causes a shift in skin tumor types and mutational target genes after exposure to low doses of UVB. Oncogene 1998; 16:2205-2212.
    • (1998) Oncogene , vol.16 , pp. 2205-2212
    • de Vries, A.1    Berg, R.J.W.2    Wijnhoven, S.3
  • 68
    • 0028985014 scopus 로고
    • Transcription-coupled repair removes both cyclobutane pyrimidine dimers and 6-4-photoproducts with equal efficiency and in a sequential way from transcribed DNA in xeroderma-pigmentosum group-C fibroblasts
    • van Hoffen A, Venema J, Meschini R, van Zeeland AA, Mullenders LH. Transcription-coupled repair removes both cyclobutane pyrimidine dimers and 6-4-photoproducts with equal efficiency and in a sequential way from transcribed DNA in xeroderma-pigmentosum group-C fibroblasts. EMBO J 1995; 14:360-367.
    • (1995) EMBO J , vol.14 , pp. 360-367
    • van Hoffen, A.1    Venema, J.2    Meschini, R.3    van Zeeland, A.A.4    Mullenders, L.H.5
  • 69
    • 3142677217 scopus 로고    scopus 로고
    • Blockage of RNA polymerase II at a cyclobutane pyrimidine dimer and 6-4 photoproduct
    • Kwei JSM, Kuraoka I, Horibata K, et al. Blockage of RNA polymerase II at a cyclobutane pyrimidine dimer and 6-4 photoproduct. Biochem Biophys Res Com 2004; 320:1133-1138.
    • (2004) Biochem Biophys Res Com , vol.320 , pp. 1133-1138
    • Kwei, J.S.M.1    Kuraoka, I.2    Horibata, K.3
  • 71
    • 31444444611 scopus 로고    scopus 로고
    • Initiation of DNA repair mediated by a stalled RNA polymerase IIo
    • Laine JP, Egly JM. Initiation of DNA repair mediated by a stalled RNA polymerase IIo. EMBO J 2006; 2:387-397.
    • (2006) EMBO J , vol.2 , pp. 387-397
    • Laine, J.P.1    Egly, J.M.2
  • 72
    • 33746666589 scopus 로고    scopus 로고
    • When transcription and repair meet: A complex system
    • Laine JP, Egly JM. When transcription and repair meet: a complex system. Trends Genet 2006; 8:430.
    • (2006) Trends Genet , vol.8 , pp. 430
    • Laine, J.P.1    Egly, J.M.2
  • 73
    • 3142739449 scopus 로고    scopus 로고
    • DNA damage stabilizes interaction of CSB with the transcription elongation machinery
    • van den Boom V, Citterio E, Hoogstraten D, et al. DNA damage stabilizes interaction of CSB with the transcription elongation machinery. J Cell Biol 2004; 166:27-36.
    • (2004) J Cell Biol , vol.166 , pp. 27-36
    • van den Boom, V.1    Citterio, E.2    Hoogstraten, D.3
  • 74
    • 0030667078 scopus 로고    scopus 로고
    • Recruitment of the putative transcription-repair coupling factor CSB/ERCC6 to RNA polymerase II elongation complexes
    • Tantin D, Kansal A, Carey M. Recruitment of the putative transcription-repair coupling factor CSB/ERCC6 to RNA polymerase II elongation complexes. Mol Cell Biol 1997; 17:6803-6814.
    • (1997) Mol Cell Biol , vol.17 , pp. 6803-6814
    • Tantin, D.1    Kansal, A.2    Carey, M.3
  • 75
    • 0030826732 scopus 로고
    • The Cockayne syndrome B protein, involved in transcription-coupled DNA repair, resides in an RNA polymerase II-containing complex
    • van Gool AJ, Citterio E, Rademakers S, et al. The Cockayne syndrome B protein, involved in transcription-coupled DNA repair, resides in an RNA polymerase II-containing complex. EMBO J 1991; 16:5955-5965.
    • (1991) EMBO J , vol.16 , pp. 5955-5965
    • van Gool, A.J.1    Citterio, E.2    Rademakers, S.3
  • 76
    • 0037039443 scopus 로고    scopus 로고
    • Translocation of Cockayne syndrome group A protein to the nuclear matrix: Possible relevance to transcription-coupled DNA repair
    • Kamiuchi S, Saijo M, Citterio E, de Jager M, Hoeijmakers JH, Tanaka K. Translocation of Cockayne syndrome group A protein to the nuclear matrix: Possible relevance to transcription-coupled DNA repair. Proc Natl Acad Sci USA 2002; 99:201-206.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 201-206
    • Kamiuchi, S.1    Saijo, M.2    Citterio, E.3    de Jager, M.4    Hoeijmakers, J.H.5    Tanaka, K.6
  • 77
    • 26944448202 scopus 로고    scopus 로고
    • Recognition of RNA polymerase II and transcription bubbles by XPG, CSB, and TFIIH: Insights from transcription -coupled repair and Cockayne syndrome
    • Sarker AH, Tsutakawa SE, Kostek S, et al. Recognition of RNA polymerase II and transcription bubbles by XPG, CSB, and TFIIH: insights from transcription -coupled repair and Cockayne syndrome. Mol Cell 2005; 20:187-198.
    • (2005) Mol Cell , vol.20 , pp. 187-198
    • Sarker, A.H.1    Tsutakawa, S.E.2    Kostek, S.3
  • 78
    • 24044438505 scopus 로고    scopus 로고
    • Transcription-coupled repair: A complex affair
    • Mellon I. Transcription-coupled repair: a complex affair. Mutat Res 2005; 1-2:155-161.
    • (2005) Mutat Res , vol.1-2 , pp. 155-161
    • Mellon, I.1
  • 79
    • 21844454990 scopus 로고    scopus 로고
    • Histone acetylation, chromatin remodelling, transcription and nucleotide excision repair in S. cerevisiae: Studies with two model genes
    • Teng Y, Yu Y, Ferreiro JA, Waters R. Histone acetylation, chromatin remodelling, transcription and nucleotide excision repair in S. cerevisiae: studies with two model genes. DNA Repair (Amst) 2005; 4:870-883.
    • (2005) DNA Repair (Amst) , vol.4 , pp. 870-883
    • Teng, Y.1    Yu, Y.2    Ferreiro, J.A.3    Waters, R.4
  • 80
    • 0032601589 scopus 로고    scopus 로고
    • Modulation of DNA damage and DNA repair in chromatin
    • Smerdon MJ, Conconi A. Modulation of DNA damage and DNA repair in chromatin. Prog Nucleic Acid Res Mol Biol 1999; 62:227-255.
    • (1999) Prog Nucleic Acid Res Mol Biol , vol.62 , pp. 227-255
    • Smerdon, M.J.1    Conconi, A.2
  • 81
    • 33749520485 scopus 로고    scopus 로고
    • Rad4-Rad23 interaction with SW1/ SNF links ATP-dependent chromatin remodeling with nucleotide excision repair
    • Gong F, Fahy D, Smerdon MJ. Rad4-Rad23 interaction with SW1/ SNF links ATP-dependent chromatin remodeling with nucleotide excision repair. Nat Struct Mol Biol 2006; 13:902-907.
    • (2006) Nat Struct Mol Biol , vol.13 , pp. 902-907
    • Gong, F.1    Fahy, D.2    Smerdon, M.J.3
  • 82
    • 0343417089 scopus 로고    scopus 로고
    • The p300/CPB family: Integrating signals with transcription factors and chromatin
    • Shikama N, Lyon J, Thangue NBL. The p300/CPB family: integrating signals with transcription factors and chromatin. Trends Cell Biol 1997; 7:230-236.
    • (1997) Trends Cell Biol , vol.7 , pp. 230-236
    • Shikama, N.1    Lyon, J.2    Thangue, N.B.L.3
  • 83
    • 0035869074 scopus 로고    scopus 로고
    • Transcription coactivator p300 binds PCNA and may have a role in DNA repair synthesis
    • Hasan S, Hassa PO, Imhof R, Hottiger MO. Transcription coactivator p300 binds PCNA and may have a role in DNA repair synthesis. Nature 2001; 410:387-391.
    • (2001) Nature , vol.410 , pp. 387-391
    • Hasan, S.1    Hassa, P.O.2    Imhof, R.3    Hottiger, M.O.4
  • 84
    • 0024383760 scopus 로고
    • Enhanced DNA repair synthesis in hyperacetylated nucleosomes
    • Ramanathan B, Smerdon MJ. Enhanced DNA repair synthesis in hyperacetylated nucleosomes. J Biol Chem 1989; 264:11026-11034.
    • (1989) J Biol Chem , vol.264 , pp. 11026-11034
    • Ramanathan, B.1    Smerdon, M.J.2
  • 86
    • 0035827346 scopus 로고    scopus 로고
    • Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution
    • Cramer P, Bushnell DA, Kornberg RD. Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution. Science 2001; 292:1863-1876.
    • (2001) Science , vol.292 , pp. 1863-1876
    • Cramer, P.1    Bushnell, D.A.2    Kornberg, R.D.3
  • 87
    • 0033597378 scopus 로고    scopus 로고
    • Transcription elongation: Structural basis and mechanisms
    • Nudler E. Transcription elongation: structural basis and mechanisms. J Mol Biol 1999; 1:1-12.
    • (1999) J Mol Biol , vol.1 , pp. 1-12
    • Nudler, E.1
  • 88
    • 24944439109 scopus 로고    scopus 로고
    • Comparative TFIIS-mediated transcript cleavage by mammalian RNA polymerase II arrested at a lesion in different transcription systems
    • Kalogeraki VS, Tornaletti S, Cooper PK, Hanawalt P. Comparative TFIIS-mediated transcript cleavage by mammalian RNA polymerase II arrested at a lesion in different transcription systems. DNA Repair (Amst) 2005; 4:1075-1087.
    • (2005) DNA Repair (Amst) , vol.4 , pp. 1075-1087
    • Kalogeraki, V.S.1    Tornaletti, S.2    Cooper, P.K.3    Hanawalt, P.4
  • 89
    • 0032827035 scopus 로고    scopus 로고
    • Rsp5 ubiquitin-protein ligase mediates DNA damage-induced degradation of the large subunit of RNA polymerase II in Saccharomyces cerevisiae
    • Beaudenon SL, Huacani MR, Wang G, McDonnell DP, Huibregtse JM. Rsp5 ubiquitin-protein ligase mediates DNA damage-induced degradation of the large subunit of RNA polymerase II in Saccharomyces cerevisiae. Mol Cell Biol 1999; 19:6972-6979.
    • (1999) Mol Cell Biol , vol.19 , pp. 6972-6979
    • Beaudenon, S.L.1    Huacani, M.R.2    Wang, G.3    McDonnell, D.P.4    Huibregtse, J.M.5
  • 90
    • 34247096165 scopus 로고    scopus 로고
    • Contending with transcriptional arrest during RNAPII transcript elongation
    • Svestrup JQ. Contending with transcriptional arrest during RNAPII transcript elongation. Trends Biochem Sci 2007; 32:165-171.
    • (2007) Trends Biochem Sci , vol.32 , pp. 165-171
    • Svestrup, J.Q.1
  • 91
    • 35748950163 scopus 로고    scopus 로고
    • Damage-induced ubiquitylation of human RNA polymerase II by the ubiquitin ligase Nedd4, but not Cockayne syndrome proteins or BRCA1
    • Anindya R, Aygun O, Svejstrup JQ. Damage-induced ubiquitylation of human RNA polymerase II by the ubiquitin ligase Nedd4, but not Cockayne syndrome proteins or BRCA1. Mol Cell 2007; 28:386-397.
    • (2007) Mol Cell , vol.28 , pp. 386-397
    • Anindya, R.1    Aygun, O.2    Svejstrup, J.Q.3
  • 92
    • 33644966829 scopus 로고    scopus 로고
    • RNA polymerase II blockage by cisplatin-damaged DNA. Stability and polyubiquitylation of stalled polymerase
    • Jung Y, Lippard SJ. RNA polymerase II blockage by cisplatin-damaged DNA. Stability and polyubiquitylation of stalled polymerase. J Biol Chem 2006; 281:1361-1370.
    • (2006) J Biol Chem , vol.281 , pp. 1361-1370
    • Jung, Y.1    Lippard, S.J.2
  • 93
    • 20444428382 scopus 로고    scopus 로고
    • Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest
    • Somesh BP, Reid J, Liu WF, et al. Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest Cell 2005; 6:913-923.
    • (2005) Cell , vol.6 , pp. 913-923
    • Somesh, B.P.1    Reid, J.2    Liu, W.F.3
  • 94
    • 33744795969 scopus 로고    scopus 로고
    • CSA-dependent degradation of CSB by the ubiquitin-proteasome pathway establishes a link between complementation factors of the Cockayne syndrome
    • Groisman R, Kuraoka I, Chevallier O, et al. CSA-dependent degradation of CSB by the ubiquitin-proteasome pathway establishes a link between complementation factors of the Cockayne syndrome. Genes Dev 2006; 20:1429-1434.
    • (2006) Genes Dev , vol.20 , pp. 1429-1434
    • Groisman, R.1    Kuraoka, I.2    Chevallier, O.3


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