-
1
-
-
0142037521
-
-
Antoniotti, M., A. Policriti, N. Ugel, and B. Mishra. 2003. Model building and model checking for biochemical processes. Cell Biochemistry and Biophysics 38.
-
Antoniotti, M., A. Policriti, N. Ugel, and B. Mishra. 2003. Model building and model checking for biochemical processes. Cell Biochemistry and Biophysics 38.
-
-
-
-
2
-
-
38549120134
-
Modelling the influence of RKIP on the ERK signalling pathway using the stochastic process algebra PEPA
-
Calder, M., S. Gilmore, and J. Hillston. 2006a. Modelling the influence of RKIP on the ERK signalling pathway using the stochastic process algebra PEPA. Transactions on Computational Systems Biology 4230.
-
(2006)
Transactions on Computational Systems Biology
, pp. 4230
-
-
Calder, M.1
Gilmore, S.2
Hillston, J.3
-
6
-
-
1842584776
-
Newest findings on the oldest oncogene; how activated Src does it
-
Frame, M. 2004. Newest findings on the oldest oncogene; how activated Src does it. Journal of Cell Science 117.
-
(2004)
Journal of Cell Science
, pp. 117
-
-
Frame, M.1
-
7
-
-
33645429016
-
Exact stochastic simulation of coupled chemical reactions
-
Gillespie, D. 1977. Exact stochastic simulation of coupled chemical reactions. Journal of Physical Chemistry 81(25).
-
(1977)
Journal of Physical Chemistry
, vol.81
, Issue.25
-
-
Gillespie, D.1
-
8
-
-
33845224003
-
Probabilistic model checking of complex biological pathways
-
Springer
-
Heath, J., M. Kwiatkowska, G. Norman, D. Parker, and O. Tymchyshyn. 2006. Probabilistic model checking of complex biological pathways. In Proceedings of the International Conference on Computational Methods in Systems Biology, Volume 4210 of LNBI: Springer.
-
(2006)
Proceedings of the International Conference on Computational Methods in Systems Biology, Volume 4210 of LNBI
-
-
Heath, J.1
Kwiatkowska, M.2
Norman, G.3
Parker, D.4
Tymchyshyn, O.5
-
10
-
-
33745802027
-
PRISM: A tool for automatic verification of probabilistic systems
-
Proceedings of the 12th International Conference on Tools and Algorithms for the Construction and Analysis of Systems, of, Springer
-
Hinton, A., M. Kwiatkowska, G. Norman, and D. Parker. 2006. PRISM: A tool for automatic verification of probabilistic systems. In Proceedings of the 12th International Conference on Tools and Algorithms for the Construction and Analysis of Systems, Volume 3920 of LNCS: Springer.
-
(2006)
LNCS
, vol.3920
-
-
Hinton, A.1
Kwiatkowska, M.2
Norman, G.3
Parker, D.4
-
11
-
-
33749865996
-
Symmetry reduction for probabilistic model checking
-
Proceedings of the 18th International Conference on Computer Aided Verification, of, Springer-Verlag
-
Kwiatkowska, M., G. Norman, and D. Parker. 2006. Symmetry reduction for probabilistic model checking. In Proceedings of the 18th International Conference on Computer Aided Verification, Volume 4144 of LNCS: Springer-Verlag.
-
(2006)
LNCS
, vol.4144
-
-
Kwiatkowska, M.1
Norman, G.2
Parker, D.3
-
13
-
-
85142184463
-
-
Novère, N. L., and T. Shimizu. 2001. Stochsim: modelling of stochastic biomolecular processes. Bioinformatics 17.
-
Novère, N. L., and T. Shimizu. 2001. Stochsim: modelling of stochastic biomolecular processes. Bioinformatics 17.
-
-
-
-
15
-
-
26444525313
-
Algorithmic algebraic model checking I: Challenges from systems biology
-
Proceedings of the 17th International Conference on Computer Aided Verification, of
-
Piazza, C., M. Antoniotti, V. Mysore, A. Policriti, F. Winkler, and B. Mishra. 2005. Algorithmic algebraic model checking I: Challenges from systems biology. In Proceedings of the 17th International Conference on Computer Aided Verification, Volume 3576 of LNCS.
-
(2005)
LNCS
, vol.3576
-
-
Piazza, C.1
Antoniotti, M.2
Mysore, V.3
Policriti, A.4
Winkler, F.5
Mishra, B.6
-
16
-
-
0035888407
-
-
Priami, C., A. Regev, E. Shapiro, and W. Silverman. 2001. Application of a stochastic name-passing calculus to representation and simulation of molecular processes. Information Process Letters 80.
-
Priami, C., A. Regev, E. Shapiro, and W. Silverman. 2001. Application of a stochastic name-passing calculus to representation and simulation of molecular processes. Information Process Letters 80.
-
-
-
-
17
-
-
46149097856
-
-
PRISM 2006. 〈www.cs.bham.ac.uk/dxp/prism〉.
-
(2006)
-
-
-
18
-
-
0037179670
-
Cells as computation
-
Regev, A., and E. Shapiro. 2002. Cells as computation. Nature 419.
-
(2002)
Nature
, pp. 419
-
-
Regev, A.1
Shapiro, E.2
-
19
-
-
33644516416
-
The pi-calculus as an abstraction for biomolecular systems
-
Springer
-
Regev, A., and E. Shapiro. 2004. The pi-calculus as an abstraction for biomolecular systems. In Modelling in Molecular Biology: Springer.
-
(2004)
Modelling in Molecular Biology
-
-
Regev, A.1
Shapiro, E.2
-
20
-
-
33646427778
-
Mathematical techniques for analyzing concurrent and probabilistic systems
-
of, American Mathematical Society
-
Rutten, J., M. Kwiatkowska, G. Norman, and D. Parker. 2004. Mathematical techniques for analyzing concurrent and probabilistic systems, Volume 23 of CRM Monograph Series. American Mathematical Society.
-
(2004)
CRM Monograph Series
, vol.23
-
-
Rutten, J.1
Kwiatkowska, M.2
Norman, G.3
Parker, D.4
-
21
-
-
46149113435
-
-
SBML
-
SBML 2006. 〈http://sbml.org/index.psp〉.
-
(2006)
-
-
-
22
-
-
0037461036
-
Cellerator: Extending a computer algebra system to include biochemical arrows for signal transduction simulations
-
Shapiro, B., A. Levchenko, E. Meyerowitz, B. Wold, and E. Mjolsness. 2003. Cellerator: extending a computer algebra system to include biochemical arrows for signal transduction simulations. Bioinformatics 19 (5).
-
(2003)
Bioinformatics
, vol.19
, Issue.5
-
-
Shapiro, B.1
Levchenko, A.2
Meyerowitz, E.3
Wold, B.4
Mjolsness, E.5
-
23
-
-
32644441860
-
Efficient integration of large stiff systems of ODEs with exponential propagation iterative (EPI) methods
-
Tokman, M. 2006. Efficient integration of large stiff systems of ODEs with exponential propagation iterative (EPI) methods. Journal of Computational Physics 213.
-
(2006)
Journal of Computational Physics
, pp. 213
-
-
Tokman, M.1
-
24
-
-
0030778628
-
Overexpression of cellular Src in fibroblasts enhances endocytic internalization of Epidermal Growth Factor receptor
-
Ware, M., D. Tice, S. Parsons, and D. Lauffenburger. 1997. Overexpression of cellular Src in fibroblasts enhances endocytic internalization of Epidermal Growth Factor receptor. Journal of Biological Chemistry 272.
-
(1997)
Journal of Biological Chemistry
, pp. 272
-
-
Ware, M.1
Tice, D.2
Parsons, S.3
Lauffenburger, D.4
-
25
-
-
4544321024
-
-
Wolkenhauer, O., M. Ullah, W. Kolch, and K. Cho. 2004. Modeling and simulation of intracellular dynamics: choosing an appropriate framework. IEEE Transactions on Nanobioscience 3.
-
Wolkenhauer, O., M. Ullah, W. Kolch, and K. Cho. 2004. Modeling and simulation of intracellular dynamics: choosing an appropriate framework. IEEE Transactions on Nanobioscience 3.
-
-
-
|