Extensible open source content management systems and frameworks: A solution for many needs of a bioinformatics group

Briefings in Bioinformatics

Volumn 9, Issue 1, 2008, Pages 69-74

  Mooney, Sean D ^a   Baenziger, Peter H ^a  

^a INDIANA UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

CMS; Content management system; Data management; Laboratory information management system; LIMS; Open source software; Website design

Indexed keywords

ACCESS TO INFORMATION; AUTOMATION; BIOINFORMATICS; BIOMEDICINE; COMPUTER ANALYSIS; COMPUTER INTERFACE; COMPUTER LANGUAGE; COMPUTER NETWORK; COMPUTER PROGRAM; DATA BASE; EDUCATION PROGRAM; INFORMATION PROCESSING; INTERNET; MEDICAL INFORMATION SYSTEM; MEDICAL RESEARCH; MEDICAL TECHNOLOGY; PUBLICATION; REVIEW; ALGORITHM; BIOLOGY; FACTUAL DATABASE; INFORMATION DISSEMINATION; INFORMATION RETRIEVAL; METHODOLOGY; SYSTEM ANALYSIS;

ALGORITHMS; COMPUTATIONAL BIOLOGY; DATABASE MANAGEMENT SYSTEMS; DATABASES, FACTUAL; INFORMATION DISSEMINATION; INFORMATION STORAGE AND RETRIEVAL; INTERNET; SOFTWARE; SYSTEMS INTEGRATION;

EID: 38049129376     PISSN: 14675463     EISSN: 14774054     Source Type: Journal    
DOI: 10.1093/bib/bbm057     Document Type: Review

References (11)

1. Caddick S, Wiki and other ways to share learning online. Nature 2006;442:744.
2. Giles J. Key biology databases go wiki. Nature 2007;445: 691.
3. Salzberg SL. Genome re-annotation: A wiki solution? Genome Biol 2007;8:102.
4. Yager K. Wiki ware could harness the Internet for science. Nature 2006;440:278.
5. Han Y. Digital content management: The search for a content management system. Library Hi Tech 2004;22:11.
6. McKeever S. Understanding web content management systems: Evolution, lifecycle and market. Industrial Management and Data Systems 2003;103:686-92.
7. Blackboard.com. The Blackboard Patent Pledge. http://www.blackboard.com/patent (29 November 2007, date last accessed).
8. Maier H, et al. LitMiner and WikiGene: Identifying problem-related key players of gene regulation using publication abstracts. Nucleic Acids Res 2005;33(Web Server issue):W779-82.
9. Friedberg I. Automated prediction - the genomic challenge protein function. Brief Bioinform 2006;7: 225-42.
10. Chen Y.B, et al. The Online Bioinformatics Resources Collection at the University of Pittsburgh Health Sciences Library System - a one-stop gateway to online bioinformatics databases and software tools. Nucleic Acids Res 2007; 35(Database issue):D780-5.
11. Wall L, Christiansen T, Orwant T. Programming Perl. 3rd edn. Beijing; Cambridge, Mass: O'Reilly, 2000, xxxi, 1070.