Using of evolutionary computations in image processing for quantitative atlas of drosophila genes expression

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 2037, Issue , 2001, Pages 374-383

  Spirov, Alexander V ^a   Timakin, Dmitry L ^b   Reinitz, John ^c   Kosman, David ^c  

^a SECHENOV INSTITUTE OF EVOLUTIONARY PHYSIOLOGY AND BIOCHEMISTRY   (Russian Federation)

^b PETER THE GREAT ST PETERSBURG POLYTECHNIC UNIVERSITY   (Russian Federation)

^c MOUNT SINAI SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGY; C++ (PROGRAMMING LANGUAGE); CELLS; COMPUTER SOFTWARE; CYTOLOGY; ELASTIC DEFORMATION; EVOLUTIONARY ALGORITHMS; GENE EXPRESSION; GENES; HEURISTIC METHODS; INTERPOLATION;

BIOCHEMICAL SIGNAL; CLASSICAL MODEL; CONFOCAL MICROSCOPES; DROSOPHILA MELANOGASTER; EVOLUTION STRATEGIES; FOURIER INTERPOLATION; GENES EXPRESSION; PATTERN DYNAMICS;

IMAGE PROCESSING;

EID: 38049067018     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/3-540-45365-2_39     Document Type: Conference Paper

References (10)

1. Lander, E.S.: The new genomics: Global view of biology. Science 274:536, 1996.
2. Sanchez, C., Lachaize, C., Janody, F., et al.: Grasping at molecular interactions and genetic networks in Drosophila melanogaster using FlyNets, an Internet database. Nucleic Acids Research 27:89-94, 1999.
3. Akam, M.: The molecular basis for metameric pattern in the Drosophila embryo. Development 101:1-22, 1987.
4. Spirov, A.V., Timakin, D.L., Reinitz, J. and Kosman, D. Experimental Determination Of Drosophila Embryonic Coordinates By Genetic Algorithms, the Simplex Method, And Their Hybrid. In S. Cagnoni et al., editors, Springer Verlag Lecture Notes in Computer Science, Number 1803, pages 97-106. 2000.
5. Reinitz, J., Kosman, D., Vanario-Alonso, C.E. Sharp, D.: Stripe forming architecture of the gap gene system. Developmental Genetics. 23:11-27, 1998.
6. Kosman, D. and Reinitz, J.: Rapid preparation of a panel of polyclonal antibodies to Drosophila segmentation proteins. Development, Genes, and Evolution 208:290-294, 1998.
7. Kosman, D., Reinitz, J. and Sharp D.H. Automated assay of gene expression at cellular resolution. In Altman, R., Dunker, K., Hunter, L. and Klein, T. editors, Proceedings of the 1998 Pacific Symposium on Biocomputing, Singapore: pages 6-17. World Scientific Press, 1997.
8. Merelo, J.J.: EO Evolutionary Computation Framework. http://geneura.ugr.es/jmerelo/eo
9. Spirov, A.V., Timakin, D.L., Reinitz, J. and Kosman, D. Using of Genetic Algorithms in Image Processing for Quantitative Atlas of Drosophila Genes Expression. http://www.mssm.edu/molbio/hoxpro/atlas/atlas.html
10. Myasnikova, E., Kosman, D., Reinitz, J. and Samsonova, M.: Spatio-temporal registration of the expression patterns of Drosophila segmentation genes, Proc.7-th Int.Conf. on Intelligent Systems for Molecular Biology, pages 195-201, AAAI Press, 1999.