메뉴 건너뛰기




Volumn 99, Issue 1, 2008, Pages 68-74

Evidence of species succession during chlorobenzene biodegradation

Author keywords

Biodegradation; Chlorobenzene; DGGE; FISH; Strain stability; Succession

Indexed keywords

BIODEGRADATION; BIOFILMS; BIOREACTORS; NUCLEOTIDES;

EID: 37549015659     PISSN: 00063592     EISSN: 10970290     Source Type: Journal    
DOI: 10.1002/bit.21576     Document Type: Article
Times cited : (28)

References (42)
  • 2
    • 0033758582 scopus 로고    scopus 로고
    • Ribosomal RNA-targeted nucleic acid probes for studies in microbial ecology
    • Amann R, Ludwig W. 2000. Ribosomal RNA-targeted nucleic acid probes for studies in microbial ecology. FEMS Microbiol Rev 24:555-565.
    • (2000) FEMS Microbiol Rev , vol.24 , pp. 555-565
    • Amann, R.1    Ludwig, W.2
  • 3
    • 0025294528 scopus 로고
    • Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
    • Amann R, Binder BJ, Olson RJ, Chisholm SW, Devereux R, Stahl DA. 1990. Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl Environ Microbiol 56:1919-1925.
    • (1990) Appl Environ Microbiol , vol.56 , pp. 1919-1925
    • Amann, R.1    Binder, B.J.2    Olson, R.J.3    Chisholm, S.W.4    Devereux, R.5    Stahl, D.A.6
  • 4
    • 0036682224 scopus 로고    scopus 로고
    • PRIMROSE: A computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database
    • Ashelford KE, Weightman AJ, Fry JC. 2002. PRIMROSE: A computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database. Nucleic Acids Res 30:3481-3489.
    • (2002) Nucleic Acids Res , vol.30 , pp. 3481-3489
    • Ashelford, K.E.1    Weightman, A.J.2    Fry, J.C.3
  • 5
    • 4143066061 scopus 로고    scopus 로고
    • Correspondence between community structure and function during succession in phenol- and phenol-plus-trichloroethene-fed sequencing batch reactors
    • Ayala-del-Rio HL, Callister SJ, Criddle CS, Tiedje JM. 2004. Correspondence between community structure and function during succession in phenol- and phenol-plus-trichloroethene-fed sequencing batch reactors. Appl Environ Microbiol 70:4950-4960.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 4950-4960
    • Ayala-del-Rio, H.L.1    Callister, S.J.2    Criddle, C.S.3    Tiedje, J.M.4
  • 6
    • 33745181167 scopus 로고    scopus 로고
    • Stability and performance of Xanthobacter autotrophicus GJ10 during 1, 2-dichloroethane biodegradation
    • Baptista IIR, Peeva L, Zhou N-Y, Leak DJ, Mantalaris A, Livingston AG. 2006. Stability and performance of Xanthobacter autotrophicus GJ10 during 1, 2-dichloroethane biodegradation. Appl Environ Microbiol 72:4411-4418.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 4411-4418
    • IIR, B.1    Peeva, L.2    Zhou, N.-Y.3    Leak, D.J.4    Mantalaris, A.5    Livingston, A.G.6
  • 8
    • 0038482137 scopus 로고    scopus 로고
    • Diversity and dynamics of microbial communities in engineered environments and their implications for process stability
    • Briones A, Raskin L. 2003. Diversity and dynamics of microbial communities in engineered environments and their implications for process stability. Curr Opin Microbiol 14:270-276.
    • (2003) Curr Opin Microbiol , vol.14 , pp. 270-276
    • Briones, A.1    Raskin, L.2
  • 10
    • 0034106192 scopus 로고    scopus 로고
    • Description of Pandoraea gen. Nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov., and Pandoraea norimbergensis comb. nov
    • Coenye T, Falsen E, Hoste B, Ohlen M, Goris J, Govan JRW, Gillis M, Vandamme P. 2000. Description of Pandoraea gen. Nov. with Pandoraea apista sp. nov., Pandoraea pulmonicola sp. nov., Pandoraea pnomenusa sp. nov., Pandoraea sputorum sp. nov., and Pandoraea norimbergensis comb. nov. Int J Syst Evol Micr 50:887-899.
    • (2000) Int J Syst Evol Micr , vol.50 , pp. 887-899
    • Coenye, T.1    Falsen, E.2    Hoste, B.3    Ohlen, M.4    Goris, J.5    Govan, J.R.W.6    Gillis, M.7    Vandamme, P.8
  • 13
    • 0028085608 scopus 로고
    • Competition in chemostat culture between pseudomonas strains that use different pathways for the degradation of toluene
    • Duetz WA, de Jong C, Williams PA, van Andel JG. 1994. Competition in chemostat culture between pseudomonas strains that use different pathways for the degradation of toluene. Appl Environ Microbiol 60:2858-2863.
    • (1994) Appl Environ Microbiol , vol.60 , pp. 2858-2863
    • Duetz, W.A.1    de Jong, C.2    Williams, P.A.3    van Andel, J.G.4
  • 14
    • 33644827811 scopus 로고    scopus 로고
    • Strain stability in biological systems treating recalcitrant organic compounds
    • Emanuelsson EAC, Baptista IIR, Mantalaris A, Livingston AG. 2005. Strain stability in biological systems treating recalcitrant organic compounds. Biotechnol Bioeng 92:843-849.
    • (2005) Biotechnol Bioeng , vol.92 , pp. 843-849
    • Emanuelsson, E.A.C.1    IIR, B.2    Mantalaris, A.3    Livingston, A.G.4
  • 15
    • 33747480950 scopus 로고    scopus 로고
    • Biodegradation of 2-fluorobenzoate in upflow fixed bed bioreactors operated with different growth support materials
    • Emanuelsson MAE, Henriques IS, Ferreira Jorge RM, Castro PML. 2006. Biodegradation of 2-fluorobenzoate in upflow fixed bed bioreactors operated with different growth support materials. J Chem Technol Biot 81:1577-1585.
    • (2006) J Chem Technol Biot , vol.81 , pp. 1577-1585
    • Emanuelsson, M.A.E.1    Henriques, I.S.2    Ferreira Jorge, R.M.3    Castro, P.M.L.4
  • 17
    • 0032868701 scopus 로고    scopus 로고
    • A novel method for characterization of microbial kinetics on volatile organic compounds
    • Ferreira Jorge RM, Livingston AG. 1999. A novel method for characterization of microbial kinetics on volatile organic compounds. Appl Microbiol Biotechnol 52:174-178.
    • (1999) Appl Microbiol Biotechnol , vol.52 , pp. 174-178
    • Ferreira Jorge, R.M.1    Livingston, A.G.2
  • 18
    • 0034610173 scopus 로고    scopus 로고
    • Microbial dynamics in an extractive membrane bioreactor exposed to an alternating sequence of organic compounds
    • Ferreira Jorge RM, Livingston AG. 2000. Microbial dynamics in an extractive membrane bioreactor exposed to an alternating sequence of organic compounds. Biotechnol Bioeng 70:313-322.
    • (2000) Biotechnol Bioeng , vol.70 , pp. 313-322
    • Ferreira Jorge, R.M.1    Livingston, A.G.2
  • 19
    • 0026396170 scopus 로고
    • Toxicity of chlorobenzene on Pseudomonas sp. strain RHO1, a chlorobenzene-degrading strain
    • Fritz H, Reineke W, Schmidt E. 1992. Toxicity of chlorobenzene on Pseudomonas sp. strain RHO1, a chlorobenzene-degrading strain. Biodegradation 2:165-170.
    • (1992) Biodegradation , vol.2 , pp. 165-170
    • Fritz, H.1    Reineke, W.2    Schmidt, E.3
  • 20
    • 0026628134 scopus 로고
    • Biodegradation of mixtures of substituted benzenes by Pseudomonas sp. strain
    • Haigler BE, Pettigrew CA, Spain JC. 1992. Biodegradation of mixtures of substituted benzenes by Pseudomonas sp. strain JS150. Appl Environ Microbiol 58:2237-2244.
    • (1992) JS150. Appl Environ Microbiol , vol.58 , pp. 2237-2244
    • Haigler, B.E.1    Pettigrew, C.A.2    Spain, J.C.3
  • 21
    • 0031982528 scopus 로고    scopus 로고
    • Microbial evolution, diversity, and ecology: A decade of ribosomal RNA analysis of uncultivated microrganisms
    • Head IM, Saunders JR, Pickup RW. 1998. Microbial evolution, diversity, and ecology: A decade of ribosomal RNA analysis of uncultivated microrganisms. Microb Ecol 35:1-21.
    • (1998) Microb Ecol , vol.35 , pp. 1-21
    • Head, I.M.1    Saunders, J.R.2    Pickup, R.W.3
  • 22
    • 1542619836 scopus 로고    scopus 로고
    • Biofilm population dynamics in a trickle-bed bioreactor used for the biodegradation of aromatic hydrocarbons from waste gas under transient conditions
    • Hekmat D, Feuchtinger A, Stephan M, Vortmeyer D. 2004. Biofilm population dynamics in a trickle-bed bioreactor used for the biodegradation of aromatic hydrocarbons from waste gas under transient conditions. Biodegradation 15:133-144.
    • (2004) Biodegradation , vol.15 , pp. 133-144
    • Hekmat, D.1    Feuchtinger, A.2    Stephan, M.3    Vortmeyer, D.4
  • 23
    • 0021966251 scopus 로고
    • Degradation of halogenated aliphatic compounds by Xanthobacter autotrophicus GJ10
    • Janssen DB, Scheper A, Dijkhuizen L, Witholt B. 1985. Degradation of halogenated aliphatic compounds by Xanthobacter autotrophicus GJ10. Appl Environ Microbiol 49:673-677.
    • (1985) Appl Environ Microbiol , vol.49 , pp. 673-677
    • Janssen, D.B.1    Scheper, A.2    Dijkhuizen, L.3    Witholt, B.4
  • 24
    • 8744253632 scopus 로고    scopus 로고
    • Bacterial diversity and function of aerobic granules engineered in a sequencing batch reactor for phenol degradation
    • Jiang H-L, Tay J-H, Maszenan AM, Tay ST-L. 2004. Bacterial diversity and function of aerobic granules engineered in a sequencing batch reactor for phenol degradation. Appl Environ Microbiol 70:6767-6775.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 6767-6775
    • Jiang, H.-L.1    Tay, J.-H.2    Maszenan, A.M.3    Tay, S.T.-L.4
  • 25
    • 0032925061 scopus 로고    scopus 로고
    • Escherichia hermanii - a new bacterial strain for chlorobenzene degradation
    • Kiernicka J, Seignez C, Peringer P. 1999. Escherichia hermanii - a new bacterial strain for chlorobenzene degradation. Lett Appl Microbiol 28:27-30.
    • (1999) Lett Appl Microbiol , vol.28 , pp. 27-30
    • Kiernicka, J.1    Seignez, C.2    Peringer, P.3
  • 26
    • 33947166712 scopus 로고    scopus 로고
    • The use of an oil absorber as a strategy to overcome starvation periods in degrading 1,2-dichloroethane in waste gas
    • Koutinas M, Baptista IIR, Peeva LG, Ferreira Jorge RM, Livingston AG. 2007. The use of an oil absorber as a strategy to overcome starvation periods in degrading 1,2-dichloroethane in waste gas. Biotechnol Bioeng 96:673-686.
    • (2007) Biotechnol Bioeng , vol.96 , pp. 673-686
    • Koutinas, M.1    IIR, B.2    Peeva, L.G.3    Ferreira Jorge, R.M.4    Livingston, A.G.5
  • 27
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • Stackebrandt E, Goodfellow M, editors, New York: John Wiley and Sons. p
    • Lane DJ. 1991. 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M, editors. Nucleic acid techniques in bacterial systematics. New York: John Wiley and Sons. p 115-148.
    • (1991) Nucleic acid techniques in bacterial systematics , pp. 115-148
    • Lane, D.J.1
  • 28
    • 0036131832 scopus 로고    scopus 로고
    • Stability of the bacterial communities supported by a seven-stage biological process treating pharmaceutical wastewater as revealed by PCR-DGGE
    • LaPara TM, Nakatsu CH, Pantea LM, Alleman JE. 2002. Stability of the bacterial communities supported by a seven-stage biological process treating pharmaceutical wastewater as revealed by PCR-DGGE. Water Res 36:638-646.
    • (2002) Water Res , vol.36 , pp. 638-646
    • LaPara, T.M.1    Nakatsu, C.H.2    Pantea, L.M.3    Alleman, J.E.4
  • 29
    • 0023644423 scopus 로고
    • Generalization of the Monod kinetics for analysis of growth data with substrate inhibition
    • Luong JHT. 1986. Generalization of the Monod kinetics for analysis of growth data with substrate inhibition. Biotechnol Bioeng 29:242-248.
    • (1986) Biotechnol Bioeng , vol.29 , pp. 242-248
    • Luong, J.H.T.1
  • 30
    • 0027068041 scopus 로고
    • Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: Problems and solutions
    • Manz W, Amann R, Ludwing W, Wagner M, Schleifer K-H. 1992. Phylogenetic oligodeoxynucleotide probes for the major subclasses of proteobacteria: Problems and solutions. Syst Appl Microbiol 15:593-600.
    • (1992) Syst Appl Microbiol , vol.15 , pp. 593-600
    • Manz, W.1    Amann, R.2    Ludwing, W.3    Wagner, M.4    Schleifer, K.-H.5
  • 31
    • 0031015322 scopus 로고    scopus 로고
    • Succession and convergence of biofilm communities in fixed-film reactors treating aromatic hydrocarbons in groundwater
    • Massol-Deya A, Weller R, Rios-Hernandez L, Zhou J-Z, Hickey RF, Tiedje JM. 1997. Succession and convergence of biofilm communities in fixed-film reactors treating aromatic hydrocarbons in groundwater. Appl Environ Microbiol 63:270-276.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 270-276
    • Massol-Deya, A.1    Weller, R.2    Rios-Hernandez, L.3    Zhou, J.-Z.4    Hickey, R.F.5    Tiedje, J.M.6
  • 32
    • 33750288577 scopus 로고    scopus 로고
    • Regioselective carboxylation of 1,3-dihydroxybenzene by 2,6-dihydroxybenzoate decarboxylase of Pandoraea sp. 12B-2
    • Matsui T, Yoshida T, Yoshimura T, Nagasawa T. 2006. Regioselective carboxylation of 1,3-dihydroxybenzene by 2,6-dihydroxybenzoate decarboxylase of Pandoraea sp. 12B-2. Appl Microbiol Biotechnol 73:95-102.
    • (2006) Appl Microbiol Biotechnol , vol.73 , pp. 95-102
    • Matsui, T.1    Yoshida, T.2    Yoshimura, T.3    Nagasawa, T.4
  • 33
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer G, De Waal EC, Uitterlinden AG. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59:695-700.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 695-700
    • Muyzer, G.1    De Waal, E.C.2    Uitterlinden, A.G.3
  • 34
    • 0029097821 scopus 로고
    • Phylogenetic relationships of thiomicrospiraspecies and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments
    • Muyzer G, Teske A, Wirsen CO, Jannasch HW. 1995. Phylogenetic relationships of thiomicrospiraspecies and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments. Arch Microbiol 164:165-172.
    • (1995) Arch Microbiol , vol.164 , pp. 165-172
    • Muyzer, G.1    Teske, A.2    Wirsen, C.O.3    Jannasch, H.W.4
  • 35
    • 0024555906 scopus 로고
    • Degradation of chlorinated and non-chlorinated aromatic solvents in soil suspensions by pure bacterial cultures
    • Oldenhuis R, Kuijk L, Lammers A, Janssen DB, Witholt B. 1989. Degradation of chlorinated and non-chlorinated aromatic solvents in soil suspensions by pure bacterial cultures. Appl Microbiol Biotechnol 30:211-217.
    • (1989) Appl Microbiol Biotechnol , vol.30 , pp. 211-217
    • Oldenhuis, R.1    Kuijk, L.2    Lammers, A.3    Janssen, D.B.4    Witholt, B.5
  • 36
    • 0242386319 scopus 로고    scopus 로고
    • Bioscrubbing of waste gas - substrate absorber to avoid instability induced by inhibition kinetics
    • Oliveira TAC, Livingston AG. 2003. Bioscrubbing of waste gas - substrate absorber to avoid instability induced by inhibition kinetics. Biotechnol Bioeng 84:552-563.
    • (2003) Biotechnol Bioeng , vol.84 , pp. 552-563
    • Oliveira, T.A.C.1    Livingston, A.G.2
  • 38
    • 0023240899 scopus 로고
    • Degradation of 1,4-dichlorobenzene by a Pseudomonas sp
    • Spain JC, Nishino SF. 1987. Degradation of 1,4-dichlorobenzene by a Pseudomonas sp. Appl Environ Microbiol 53:1010-1019.
    • (1987) Appl Environ Microbiol , vol.53 , pp. 1010-1019
    • Spain, J.C.1    Nishino, S.F.2
  • 40
    • 0035671792 scopus 로고    scopus 로고
    • Long-term stability of mercury-reducing microbial biofilm communities analyzed by 16S-23S rDNA interspacer region polymorphism
    • Von Canstein HF, Li Y, Felske A, Wagner-Dobler I. 2001. Long-term stability of mercury-reducing microbial biofilm communities analyzed by 16S-23S rDNA interspacer region polymorphism. Microb Ecol 42:624-634.
    • (2001) Microb Ecol , vol.42 , pp. 624-634
    • Von Canstein, H.F.1    Li, Y.2    Felske, A.3    Wagner-Dobler, I.4
  • 42
    • 0034547651 scopus 로고    scopus 로고
    • Examination of two years of community dynamics in an anaerobic bioreactor using fluorescence polymerase chain reaction (PCR) single-strand conformation polymorphism analysis
    • Zumstein E, Moletta R, Godon J. 2000. Examination of two years of community dynamics in an anaerobic bioreactor using fluorescence polymerase chain reaction (PCR) single-strand conformation polymorphism analysis. Environ Microbiol 2:69-78.
    • (2000) Environ Microbiol , vol.2 , pp. 69-78
    • Zumstein, E.1    Moletta, R.2    Godon, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.