-
1
-
-
8844277626
-
Analyzing time series gene expression data
-
Bar-Joseph Z 2004 Analyzing time series gene expression data; Bioinformatics 20 2493-2503
-
(2004)
Bioinformatics
, vol.20
, pp. 2493-2503
-
-
Bar-Joseph, Z.1
-
2
-
-
0041346457
-
Continuous representations of time-series gene expression data
-
Bar-Joseph Z, Gerber G K, Gifford D K, Jaakkola T S and Simon I 2003 Continuous representations of time-series gene expression data; J. Comput. Biol. 10 341-356
-
(2003)
J. Comput. Biol
, vol.10
, pp. 341-356
-
-
Bar-Joseph, Z.1
Gerber, G.K.2
Gifford, D.K.3
Jaakkola, T.S.4
Simon, I.5
-
3
-
-
0037162469
-
Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
-
Bernstein J A, Khodursky A B, Lin P H, Lin-Chao S and Cohen S N 2002 Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays; Proc. Natl. Acad. Sci. USA 99 9697-9702
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 9697-9702
-
-
Bernstein, J.A.1
Khodursky, A.B.2
Lin, P.H.3
Lin-Chao, S.4
Cohen, S.N.5
-
4
-
-
18244376808
-
Homeostatic adjustment and metabolic remodeling in glucose-limited yeast cultures
-
Brauer M J, Saldanha A J, Dolinski K and Botstein D 2005 Homeostatic adjustment and metabolic remodeling in glucose-limited yeast cultures; Mol. Biol. Cell 16 2503-2517
-
(2005)
Mol. Biol. Cell
, vol.16
, pp. 2503-2517
-
-
Brauer, M.J.1
Saldanha, A.J.2
Dolinski, K.3
Botstein, D.4
-
5
-
-
12244267727
-
Global transcriptional responses of fission yeast to environmental stress
-
Chen D, Toone W M, Mata J, Lyne R, Burns G, Kivinen K, Brazma A, Jones N and Bahler J 2003 Global transcriptional responses of fission yeast to environmental stress; Mol. Biol. Cell 14 214-229
-
(2003)
Mol. Biol. Cell
, vol.14
, pp. 214-229
-
-
Chen, D.1
Toone, W.M.2
Mata, J.3
Lyne, R.4
Burns, G.5
Kivinen, K.6
Brazma, A.7
Jones, N.8
Bahler, J.9
-
6
-
-
4444339832
-
Quantitative characterization of the transcriptional regulatory network in the yeast cell cycle
-
Chen H C, Lee H C, Lin T Y, Li W H and Chen B S 2004 Quantitative characterization of the transcriptional regulatory network in the yeast cell cycle; Bioinformatics 20 1914-1927
-
(2004)
Bioinformatics
, vol.20
, pp. 1914-1927
-
-
Chen, H.C.1
Lee, H.C.2
Lin, T.Y.3
Li, W.H.4
Chen, B.S.5
-
8
-
-
0032112293
-
A genome-wide transcriptional analysis of the mitotic cell cycle
-
Cho R J, Campbell M J, Winzeler E A, Steinmetz L, Conway A, Wodicka L, Wolfsberg T G, Gabrielian A E, Landsman D, Lockhart D J and Davis R W 1998 A genome-wide transcriptional analysis of the mitotic cell cycle; Mol. Cell 2 65-73
-
(1998)
Mol. Cell
, vol.2
, pp. 65-73
-
-
Cho, R.J.1
Campbell, M.J.2
Winzeler, E.A.3
Steinmetz, L.4
Conway, A.5
Wodicka, L.6
Wolfsberg, T.G.7
Gabrielian, A.E.8
Landsman, D.9
Lockhart, D.J.10
Davis, R.W.11
-
9
-
-
0036677451
-
Global analysis of stress-regulated mRNA turnover by using cDNA arrays
-
Fan J, Yang X, Wang W, Wood W H 3rd, Becker K G and Gorospe M 2002 Global analysis of stress-regulated mRNA turnover by using cDNA arrays; Proc. Natl. Acad. Sci. USA 99 10611-10616
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 10611-10616
-
-
Fan, J.1
Yang, X.2
Wang, W.3
Wood 3rd, W.H.4
Becker, K.G.5
Gorospe, M.6
-
10
-
-
0037370460
-
Life after transcription - revisiting the fate of messenger RNA
-
Khodursky A B and Bernstein J A 2003 Life after transcription - revisiting the fate of messenger RNA; Trends Genet. 19 113-115
-
(2003)
Trends Genet
, vol.19
, pp. 113-115
-
-
Khodursky, A.B.1
Bernstein, J.A.2
-
11
-
-
0037339264
-
Clustering of time-course gene expression data using a mixed-effects model with B-splines
-
Luan Y and Li H 2003 Clustering of time-course gene expression data using a mixed-effects model with B-splines; Bioinformatics 19 474-482
-
(2003)
Bioinformatics
, vol.19
, pp. 474-482
-
-
Luan, Y.1
Li, H.2
-
12
-
-
14844307159
-
Inferring quantitative models of regulatory networks from expression data
-
Nachman I, Regev A and Friedman N 2004 Inferring quantitative models of regulatory networks from expression data; Bioinformatics (Supp1.1) 20 i248-i256
-
(2004)
Bioinformatics (Supp1.1)
, vol.20
-
-
Nachman, I.1
Regev, A.2
Friedman, N.3
-
13
-
-
4644288309
-
Microarray-based analyses of mRNA decay in the regulation of mammalian gene expression
-
Raghavan A and Bohjanen P R 2004 Microarray-based analyses of mRNA decay in the regulation of mammalian gene expression; Brief. Funct. Genomic Proteomic 3 112-124
-
(2004)
Brief. Funct. Genomic Proteomic
, vol.3
, pp. 112-124
-
-
Raghavan, A.1
Bohjanen, P.R.2
-
15
-
-
0036173128
-
Extracting transcriptional events from temporal gene expression patterns during Dictyostelium development
-
Sasik R, Iranfar N, Hwa T and Loomis W F 2002 Extracting transcriptional events from temporal gene expression patterns during Dictyostelium development; Bioinformatics 18 61-66
-
(2002)
Bioinformatics
, vol.18
, pp. 61-66
-
-
Sasik, R.1
Iranfar, N.2
Hwa, T.3
Loomis, W.F.4
-
16
-
-
0015799327
-
Messenger RNA in HeLa cells: Kinetics of formation and decay
-
Singer R H and Penman S 1973 Messenger RNA in HeLa cells: kinetics of formation and decay; J. Mol. Biol. 78 321-334
-
(1973)
J. Mol. Biol
, vol.78
, pp. 321-334
-
-
Singer, R.H.1
Penman, S.2
-
17
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
-
Spellman P T, Sherlock G, Zhang M Q, Iyer V R, Anders K, Eisen M B, Brown P O, Botstein D and Futcher B 1998 Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization; Mol. Biol. Cell 9 3273-3297
-
(1998)
Mol. Biol. Cell
, vol.9
, pp. 3273-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
Anders, K.5
Eisen, M.B.6
Brown, P.O.7
Botstein, D.8
Futcher, B.9
-
18
-
-
0037197892
-
Precision and functional specificity in mRNA decay
-
Wang Y, Liu C L, Storey J D, Tibshirani R J, Herschlag D and Brown P O 2002 Precision and functional specificity in mRNA decay; Proc. Natl. Acad. Sci. USA 99 5860-5865
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 5860-5865
-
-
Wang, Y.1
Liu, C.L.2
Storey, J.D.3
Tibshirani, R.J.4
Herschlag, D.5
Brown, P.O.6
-
19
-
-
0041523923
-
Decay rates of human mRNAs: Correlation with functional characteristics and sequence attributes
-
Yang E, van Nimwegen E, Zavolan M, Rajewsky N, Schroeder M, Magnasco M and Darnell J E Jr 2003 Decay rates of human mRNAs: correlation with functional characteristics and sequence attributes; Genome Res. 13 1863-1872
-
(2003)
Genome Res
, vol.13
, pp. 1863-1872
-
-
Yang, E.1
van Nimwegen, E.2
Zavolan, M.3
Rajewsky, N.4
Schroeder, M.5
Magnasco, M.6
Darnell Jr, J.E.7
-
20
-
-
0035024021
-
Validating clustering for gene expression data
-
Yeung K Y, Haynor D R and Ruzzo W L 2001 Validating clustering for gene expression data; Bioinformatics 17 309-318
-
(2001)
Bioinformatics
, vol.17
, pp. 309-318
-
-
Yeung, K.Y.1
Haynor, D.R.2
Ruzzo, W.L.3
-
21
-
-
0037197936
-
Reverse engineering gene networks using singular value decomposition and robust regression
-
Yeung M K, Tegner J and Collins J J 2002 Reverse engineering gene networks using singular value decomposition and robust regression; Proc. Natl. Acad. Sci. USA 99 6163-6168
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 6163-6168
-
-
Yeung, M.K.1
Tegner, J.2
Collins, J.J.3
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