Knoellia aerolata sp. nov., isolated from an air sample in Korea

International Journal of Systematic and Evolutionary Microbiology

Volumn 57, Issue 12, 2007, Pages 2861-2864

  Weon, Hang Yeon ^a   Kim, Byung Yong ^b   Schumann, Peter ^c   Kroppenstedt, Reiner M ^c   Noh, Hyung Jun ^a   Park, Chan Won ^a   Kwon, Soon Wo ^b  

^a National Institute of Animal Science   (South Korea)

^b National Institute of Agricultural Science   (South Korea)

^c LEIBNIZ INSTITUTE DSMZ GERMAN COLLECTION OF MICROORGANISMS AND CELL CULTURES   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL RNA; CARDIOLIPIN; CASEIN; CATALASE; DIAMINOPIMELIC ACID; OXIDOREDUCTASE; PHOSPHATIDYLETHANOLAMINE; PHOSPHATIDYLGLYCEROL; PHOSPHATIDYLINOSITOL; QUINONE DERIVATIVE; QUINONE MK 8; RNA 16S; UNCLASSIFIED DRUG; XANTHINE;

ACTINOBACTERIA; AIR SAMPLING; ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATION; CELL STRUCTURE; DNA DNA HYBRIDIZATION; DNA EXTRACTION; ENZYME ACTIVITY; ENZYME ANALYSIS; GENE SEQUENCE; KNOELLIA AEROLATA; KOREA; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PHASE CONTRAST MICROSCOPY; PHYLOGENY; PRIORITY JOURNAL; PROTEIN HYDROLYSIS; SEQUENCE ANALYSIS;

ACTINOMYCETALES; AIR MICROBIOLOGY; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; CARBOHYDRATES; CELL WALL; DIAMINOPIMELIC ACID; DNA, BACTERIAL; DNA, RIBOSOMAL; FATTY ACIDS; GENES, RRNA; HYDROGEN-ION CONCENTRATION; KOREA; LOCOMOTION; MOLECULAR SEQUENCE DATA; MYCOLIC ACIDS; NUCLEIC ACID HYBRIDIZATION; PHOSPHOLIPIDS; PHYLOGENY; QUINONES; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; SODIUM CHLORIDE; SPORES, BACTERIAL; TEMPERATURE;

BACTERIA (MICROORGANISMS); KNOELLIA; KNOELLIA SINENSIS; KNOELLIA SUBTERRANEA; POSIBACTERIA;

EID: 37449001346     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65293-0     Document Type: Article

References (17)

1. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
2. Fitch, W. M. (1971). Toward defining the course of evolution: minimum change for a specific tree topology. Syst Zool 20, 406-416.
3. Groth, I., Schumann, P., Schutze, B., Augsten, K. & Stackebrandt, E. (2002). Knoellia sinensis gen. nov., sp. nov. and Knoellia subterranea sp. nov., two novel actinobacteria isolated from a cave. Int J Syst Evol Microbiol 52, 77-84.
4. Kimura, M. (1983). The Neutral Theory of Molecular Evolution. Cambridge: Cambridge University Press.
5. Kroppenstedt, R. M. (1985). Fatty acid and menaquinone analysis of actinomycetes and related organisms. In Chemical Methods in Bacterial Systematics (SAB Technical Series no. 20), pp. 173-199. Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press.
6. Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
7. Kwon, S. W., Kim, J. S., Park, 1. C., Yoon, S. H., Park D. H., Lim, C. K. & Go, S. J. (2003). Pseudomonas koreensis sp. nov., Pseudomonas umsongensis sp. nov. and Pseudomonas jinjuensis sp. nov., novel species from farm soils in Korea. Int J Syst Evol Microbiol 53, 21-27.
8. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G + C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
9. Minnikin, D. E., Alshamaony, L. & Goodfellow, M. (1975). Differentiation of Mycobacterium, Nocardia, and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates. J Gen Microbiol 88, 200-204.
10. Minnikin, D. E., O'Donnell, A. G., Goodfellow, M., Alderson, G., Athalye, M., Schaal, K. & Parlett, J. H. (1984). An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J Microbiol Methods 2, 233-241.
11. Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
12. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids, MIDI Technical Note 10 1. Newark, DE: MIDI Inc.
13. Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
14. Seldin, L. & Dubnau, D. (1985). Deoxyribonucleic acid homology among Bacillus polymyxa, Bacillus macerans, Bacillus azotofixans, and other nitrogen-fixing Bacillus strains. Int J Syst Bacteriol 35, 151-154.
15. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Wood & N. R. Krieg. Washington, DC: American Society for Microbiology.
16. Staneck J. L. & Roberts, G. D. (1974). Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography. Appl Microbiol 28, 226-231.
17. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.