-
1
-
-
0035312933
-
Identification of thermophilic species by the amino acid compositions deduced from their genomes
-
Kreil D.P., and Ouzounis C.A. Identification of thermophilic species by the amino acid compositions deduced from their genomes. Nucleic Acids Res. 29 (2001) 1608-1615
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1608-1615
-
-
Kreil, D.P.1
Ouzounis, C.A.2
-
2
-
-
0037019808
-
Amino acid composition of genomes, lifestyles of organisms, and evolutionary trends: a global picture with correspondence analysis
-
Tekaia F., et al. Amino acid composition of genomes, lifestyles of organisms, and evolutionary trends: a global picture with correspondence analysis. Gene 297 (2002) 51-60
-
(2002)
Gene
, vol.297
, pp. 51-60
-
-
Tekaia, F.1
-
3
-
-
0242290154
-
Thermophilic prokaryotes have characteristic patterns of codon usage, amino acid composition and nucleotide content
-
Singer G.A., and Hickey D.A. Thermophilic prokaryotes have characteristic patterns of codon usage, amino acid composition and nucleotide content. Gene 317 (2003) 39-47
-
(2003)
Gene
, vol.317
, pp. 39-47
-
-
Singer, G.A.1
Hickey, D.A.2
-
4
-
-
19644401538
-
Genomic and proteomic adaptations to growth at high temperature
-
Hickey D.A., and Singer G.A. Genomic and proteomic adaptations to growth at high temperature. Genome Biol. 5 (2004) 117
-
(2004)
Genome Biol.
, vol.5
, pp. 117
-
-
Hickey, D.A.1
Singer, G.A.2
-
5
-
-
33745819577
-
Use of a multi-way method to analyze the amino acid composition of a conserved group of orthologous proteins in prokaryotes
-
Pasamontes A., and Garcia-Vallve S. Use of a multi-way method to analyze the amino acid composition of a conserved group of orthologous proteins in prokaryotes. BMC Bioinformatics 7 (2006) 257
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 257
-
-
Pasamontes, A.1
Garcia-Vallve, S.2
-
6
-
-
0035098779
-
Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability
-
Vieille C., and Zeikus G.J. Hyperthermophilic enzymes: sources, uses, and molecular mechanisms for thermostability. Microbiol. Mol. Biol. Rev. 65 (2001) 1-43
-
(2001)
Microbiol. Mol. Biol. Rev.
, vol.65
, pp. 1-43
-
-
Vieille, C.1
Zeikus, G.J.2
-
7
-
-
0037931826
-
Genomic correlates of hyperthermostability, an update
-
Suhre K., and Claverie J.M. Genomic correlates of hyperthermostability, an update. J. Biol. Chem. 278 (2003) 17198-17202
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 17198-17202
-
-
Suhre, K.1
Claverie, J.M.2
-
8
-
-
12744268746
-
Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus
-
Takami H., et al. Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus. Nucleic Acids Res. 32 (2004) 6292-6303
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 6292-6303
-
-
Takami, H.1
-
9
-
-
33846536849
-
Evolution of proteomes: fundamental signatures and global trends in amino acid compositions
-
Tekaia F., and Yeramian E. Evolution of proteomes: fundamental signatures and global trends in amino acid compositions. BMC Genomics 7 (2006) 307
-
(2006)
BMC Genomics
, vol.7
, pp. 307
-
-
Tekaia, F.1
Yeramian, E.2
-
10
-
-
33846519263
-
Protein and DNA sequence determinants of thermophilic adaptation
-
Zeldovich K.B., et al. Protein and DNA sequence determinants of thermophilic adaptation. PLoS Comput. Biol. 3 (2007) e5
-
(2007)
PLoS Comput. Biol.
, vol.3
-
-
Zeldovich, K.B.1
-
11
-
-
0348047627
-
Proteomic signatures: amino acid and oligopeptide compositions differentiate among phyla
-
Pe'er I., et al. Proteomic signatures: amino acid and oligopeptide compositions differentiate among phyla. Proteins 54 (2004) 20-40
-
(2004)
Proteins
, vol.54
, pp. 20-40
-
-
Pe'er, I.1
-
12
-
-
34248161913
-
Environment specific substitution tables for thermophilic proteins
-
Mizuguchi K., et al. Environment specific substitution tables for thermophilic proteins. BMC Bioinformatics 8 Suppl. 1 (2007) S15
-
(2007)
BMC Bioinformatics
, vol.8
, Issue.SUPPL. 1
-
-
Mizuguchi, K.1
-
14
-
-
32044454841
-
Effective factors in thermostability of thermophilic proteins
-
Sadeghi M., et al. Effective factors in thermostability of thermophilic proteins. Biophys. Chem. 119 (2006) 256-270
-
(2006)
Biophys. Chem.
, vol.119
, pp. 256-270
-
-
Sadeghi, M.1
-
15
-
-
33644700003
-
Toward automatic reconstruction of a highly resolved tree of life
-
Ciccarelli F.D., et al. Toward automatic reconstruction of a highly resolved tree of life. Science 311 (2006) 1283-1287
-
(2006)
Science
, vol.311
, pp. 1283-1287
-
-
Ciccarelli, F.D.1
-
16
-
-
0037118037
-
Phylogeny: a non-hyperthermophilic ancestor for bacteria
-
Brochier C., and Philippe H. Phylogeny: a non-hyperthermophilic ancestor for bacteria. Nature 417 (2002) 244
-
(2002)
Nature
, vol.417
, pp. 244
-
-
Brochier, C.1
Philippe, H.2
-
17
-
-
0037079680
-
A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis
-
Makarova K.S., et al. A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis. Nucleic Acids Res. 30 (2002) 482-496
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 482-496
-
-
Makarova, K.S.1
-
18
-
-
27744595408
-
Comparative genomics of Thermus thermophilus and Deinococcus radiodurans: divergent routes of adaptation to thermophily and radiation resistance
-
Omelchenko M.V., et al. Comparative genomics of Thermus thermophilus and Deinococcus radiodurans: divergent routes of adaptation to thermophily and radiation resistance. BMC Evol. Biol. 5 (2005) 57
-
(2005)
BMC Evol. Biol.
, vol.5
, pp. 57
-
-
Omelchenko, M.V.1
-
19
-
-
2542451914
-
Preferred amino acids and thermostability
-
Farias S.T., and Bonato M.C. Preferred amino acids and thermostability. Genet. Mol. Res. 2 (2003) 383-393
-
(2003)
Genet. Mol. Res.
, vol.2
, pp. 383-393
-
-
Farias, S.T.1
Bonato, M.C.2
-
20
-
-
0033670249
-
Horizontal gene transfer in bacterial and archaeal complete genomes
-
Garcia-Vallve S., et al. Horizontal gene transfer in bacterial and archaeal complete genomes. Genome Res. 10 (2000) 1719-1725
-
(2000)
Genome Res.
, vol.10
, pp. 1719-1725
-
-
Garcia-Vallve, S.1
-
21
-
-
0242276676
-
Lateral gene transfer and the origins of prokaryotic groups
-
Boucher Y., et al. Lateral gene transfer and the origins of prokaryotic groups. Annu. Rev. Genet. 37 (2003) 283-328
-
(2003)
Annu. Rev. Genet.
, vol.37
, pp. 283-328
-
-
Boucher, Y.1
-
22
-
-
33748317821
-
Characterization of DNA transport in the thermophilic bacterium Thermus thermophilus HB27
-
Schwarzenlander C., and Averhoff B. Characterization of DNA transport in the thermophilic bacterium Thermus thermophilus HB27. FEBS J. 273 (2006) 4210-4218
-
(2006)
FEBS J.
, vol.273
, pp. 4210-4218
-
-
Schwarzenlander, C.1
Averhoff, B.2
-
23
-
-
34250896106
-
Widespread distribution of archaeal reverse gyrase in thermophilic bacteria suggests a complex history of vertical inheritance and lateral gene transfers
-
Brochier-Armanet C., and Forterre P. Widespread distribution of archaeal reverse gyrase in thermophilic bacteria suggests a complex history of vertical inheritance and lateral gene transfers. Archaea 2 (2006) 83-93
-
(2006)
Archaea
, vol.2
, pp. 83-93
-
-
Brochier-Armanet, C.1
Forterre, P.2
-
24
-
-
0037383069
-
Potential genomic determinants of hyperthermophily
-
Makarova K.S., et al. Potential genomic determinants of hyperthermophily. Trends Genet. 19 (2003) 172-176
-
(2003)
Trends Genet.
, vol.19
, pp. 172-176
-
-
Makarova, K.S.1
-
25
-
-
33745991943
-
Comparative genomics of Thermus thermophilus: plasticity of the megaplasmid and its contribution to a thermophilic lifestyle
-
Bruggemann H., and Chen C. Comparative genomics of Thermus thermophilus: plasticity of the megaplasmid and its contribution to a thermophilic lifestyle. J. Biotechnol. 124 (2006) 654-661
-
(2006)
J. Biotechnol.
, vol.124
, pp. 654-661
-
-
Bruggemann, H.1
Chen, C.2
|