Quantitative and Qualitative Analysis of Plant Membrane Traffic Using Fluorescent Proteins

Methods in Cell Biology

Volumn 85, Issue , 2008, Pages 353-380

  Samalova, Marketa ^a   Fricker, Mark ^a   Moore, Ian ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CARRIER PROTEIN; GREEN FLUORESCENT PROTEIN; HYBRID PROTEIN; MEMBRANE PROTEIN; PHOTOPROTEIN; VEGETABLE PROTEIN;

CELL MEMBRANE; CONFOCAL MICROSCOPY; FLUORESCENCE MICROSCOPY; INTRACELLULAR MEMBRANE; METABOLISM; METHODOLOGY; PLANT; REVIEW;

CELL MEMBRANE; GREEN FLUORESCENT PROTEINS; INTRACELLULAR MEMBRANES; LUMINESCENT PROTEINS; MEMBRANE PROTEINS; MEMBRANE TRANSPORT PROTEINS; MICROSCOPY, CONFOCAL; MICROSCOPY, FLUORESCENCE; PLANT PROTEINS; PLANTS; RECOMBINANT FUSION PROTEINS;

EID: 37249037064     PISSN: 0091679X     EISSN: None     Source Type: Book Series    
DOI: 10.1016/S0091-679X(08)85015-7     Document Type: Review

References (43)

1. Batoko H., Zheng H.Q., Hawes C., and Moore I. A Rab1 GTPase is required for transport between the endoplasmic reticulum and Golgi apparatus for normal Golgi movement in plants. Plant Cell 12 (2000) 2201-2217
2. Boevink P., Martin B., Oparka K., Cruz S.S., and Hawes C. Transport of virally expressed green fluorescent protein through the secretory pathway in tobacco leaves is inhibited by cold shock and brefeldin A. Planta 208 (1999) 392-400
3. Boevink P., Oparka K., Cruz S.S., Martin B., Betteridge A., and Hawes C. Stacks on tracks: The plant Golgi apparatus traffics on an actin/ER network. Plant J. 15 (1998) 441-447
4. Brandizzi F., Fricker M., and Hawes C. A greener world: The revolution in plant bioimaging. Nat. Rev. Mol. Cell Biol. 3 (2002) 520-530
5. Brandizzi F., Irons S.L., Johansen J., Kotzer A., and Neumann U. GFP is the way to glow: Bioimaging of the plant endomembrane system. J. Microsc. 214 (2004) 138-158
6. Campbell R.E., Tour O., Palmer A.E., Steinbach P.A., Baird G.S., Zacharias D.A., and Tsien R.Y. A monomeric red fluorescent protein. Proc. Natl. Acad. Sci. USA 99 (2002) 7877-7882
7. DaSilva L.L.P., Snapp E.L., Denecke J., Lippincott-Schwartz J., Hawes C., and Brandizzi F. Endoplasmic reticulum export sites and golgi bodies behave as single mobile secretory units in plant cells. Plant Cell 16 (2004) 1753-1771
8. DaSilva L.L.P., Taylor J.P., Hadlington J.L., Hanton S.L., Snowden C.J., Fox S.J., Foresti O., Brandizzi F., and Denecke J. Receptor salvage from the prevacuolar compartment is essential for efficient vacuolar protein targeting. Plant Cell 17 (2005) 132-148
9. De Felipe P., Hughes L.E., Ryan M.D., and Brown J.D. Co-translational, intraribosomal cleavage of polypeptides by the foot-and-mouth disease virus 2A peptide. J. Biol. Chem. 278 (2003) 11441-11448
10. De Felipe P., and Ryan M.D. Targeting of proteins derived from self-processing polyproteins containing multiple signal sequences. Traffic 5 (2004) 616-626
11. Di Sansebastiano G.P., Paris N., Marc-Martin S., and Neuhaus J.-M. Specific accumulation of GFP in a non-acidic vacuolar compartment via a C-terminal propeptide-mediated sorting pathway. Plant J. 15 (1998) 449-457
12. El Amrani A., Barakate A., Askari B.M., Li X., Roberts A.C., Ryan M.D., and Halpin C. Coordinate expression and independent subcellular targeting of multiple proteins from a single transgene. Plant Physiol. 135 (2004) 16-24
13. Flückiger R., De Caroli M., Piro G., Dalessandro G., Neuhaus J.-M., and Di Sansebastiano G.-P. Vacuolar system distribution in Arabidopsis tissues, visualized using GFP fusion proteins. J. Exp. Bot. 54 (2003) 1577-1584
14. Frigerio L., de Virgilio M., Prada A., Faoro F., and Vitale A. Sorting of phaseolin to the vacuole is saturable and requires a short C-terminal peptide. Plant Cell 101 (1998) 1031-1042
15. Geelen D., Leyman B., Batoko H., Di Sansabastiano G.-P., Moore I., and Blatt M.R. The abscisic acid-related SNARE homolog NtSyr1 contributes to secretion and growth: Evidence from competition with its cytosolic domain. Plant Cell 14 (2002) 387-406
16. Grignon C., and Sentenac H. pH and ionic conditions in the apoplast. Annu. Rev. Plant Physiol. Plant Mol. Biol. 42 (1991) 103-128
17. Halpin C., Cooke S.E., Barakate A., El Amrani A., and Ryan M.D. Self-processing 2A-polyproteins-a system for co-ordinate expression of multiple proteins in transgenic plants. Plant J. 17 (1999) 453-459
18. Haseloff J.
19. Irons S., Evans D., and Brandizzi F. The first 238 amino acids of the human lamin B receptor are targeted to the nuclear envelop in plants. J. Exp. Bot. 54 (2003) 943-950
20. 2+. Plant Cell Physiol. 47 (2006) 96-106
21. Kotzer A.M., Brandizzi F., Neumann U., Paris N., Moore I., and Hawes C. AtRabF2b (Ara7) acts on the vacuolar trafficking pathway in tobacco leaf epidermal cells. J. Cell Sci. 117 (2004) 6377-6389
22. Kunze I., Hensel G., Adler K., Bernard J., Neubohn B., Nilsson C., Stoltenburg R., Kohlwein S., and Kunze G. The green fluorescent protein targets secretory proteins to the yeast vacuole. Biochim. Biophys. Acta 1410 (1999) 287-298
23. Lee G.J., Sohn E.J., Lee M.H., and Hwang I. The Arabidopsis Rab5 homologs Rha1 and Ara7 localize to the prevacuolar compartment. Plant Cell Physiol. 45 (2004) 1211-1220
24. Lee M.H., Min M.K., Lee Y.J., Jin J.B., Shin D.H., Kim D.H., Lee K.-H., and Hwang I. ADP-Ribosylation Factor 1 of Arabidopsis plays a critical role in intracellular trafficking and maintenance of endoplasmic reticulum morphology in Arabidopsis. Plant Physiol. 129 (2002) 1507-1520
25. Ma C.L., and Mitra A. Expressing multiple genes in a single open reading frame with the 2A region of foot-and-mouth disease virus as a linker. Mol. Breed. 9 (2002) 191-199
26. Matsushima R., Kondo M., Nishimura M., and Hara-Nishimura I. A novel ER-derived compartment, the ER body, selectively accumulates a β-glucosidase with an ER retention signal in. Arabidopsis. Plant J. 33 (2003) 493-502
27. Nagai T., Ibata K., Park E.S., Kubota M., Mikoshiba K., and Miyawaki A. A variant of yellow fluorescent protein with fast and efficient maturation for cell-biological applications. Nat. Biotechnol. 20 (2002) 87-90
28. Runions J., Brach T., Kuhner S., and Hawes C. Photoactivation of GFP reveals protein dynamics within the endoplasmic reticulum membrane. J. Exp. Bot. 57 (2006) 43-50
29. Ryan M.D., Donnelly M., Lewis A., Mehrotra A.P., Wilkie J., and Gani D. A model for nonstoichiometric, cotranslational protein scission in eukaryotic ribosomes. Bioorg Chem. 27 (1999) 55-79
30. Saint-Jore C.M., Evins J., Batoko H., Brandizzi F., Moore I., and Hawes C. Redistribution of membrane proteins between the Golgi apparatus and endoplasmic reticulum in plants is reversible and not dependent on cytoskeletal networks. Plant J. 29 (2002) 661-678
31. Samalova M., Fricker M., and Moore I. Ratiometric fluorescence-imaging assays of plant membrane traffic using polyproteins. Traffic 7 (2006) 1701-1723
32. Scott A., Wyatt S.E., Tsou P.-L., Robertson D., and Allen N.S. A model system for plant cell biology: GFP imaging in living onion epidermal cells. BioTechniques 26 (1999) 1127-1132
33. Shaner N.C., Steinbach P.A., and Tsien R.Y. A guide to choosing fluorescent proteins. Nat. Methods 2 (2005) 905-909
34. Snapp E.L., Hegde R.S., Francolini M., Lombardo F., Colombo S., Pedrazzini E., Borgese N., and Lippincott-Schwartz J. Formation of stacked ER cisternae by low affinity protein interactions. J. Cell Biol. 163 (2003) 257-269
35. Sohn E.J., Kim E.S., Zhao M., Kim S.J., Kim H., Kim Y.W., Lee Y.J., Hillmer S., Sohn U., Jiang L.W., and Hwang I.W. Rha1, an Arabidopsis Rab5 homolog, plays a critical role in the vacuolar trafficking of soluble cargo proteins. Plant Cell 15 (2003) 1057-1070
36. Swarup R., Kargul J., Marchant A., Zadik D., Rahman A., Mills R., Yemm A., May S., Williams L., Millner P., Tsurumi S., Moore I., et al. Structure-function analysis of the presumptive Arabidopsis auxin permease AUX1. Plant Cell 16 (2004) 3069-3083
37. Takeuchi M., Ueda T., Sato K., Abe H., Nagata T., and Nakano A. A dominant negative mutant of Sar1 GTPase inhibits protein transport from the endoplasmic reticulum to the Golgi apparatus in tobacco and Arabidopsis cultured cells. Plant J. 23 (2000) 517-525
38. Tamura K., Shimada T., Kondo M., Nishimura M., and Hara-Nishimura I. KATAMARI1/MURUS3 is a novel Golgi membrane protein that is required for endomembrane organization in Arabidopsis. Plant Cell 17 (2005) 1764-1776
39. Tamura K., Shimada T., Ono E., Tanaka Y., Nagatani A., Higashi S., Watanabe M., Nishimura M., and Hara-Nishimura I. Why green fluorescence fusion proteins have not been observed in the vacuoles of higher plants. Plant J. 35 (2003) 545-555
40. Tamura K., Yamada K., Shimada T., and Hara-Nishimura I. Endoplasmic reticulum-resident proteins are constitutively transported to vacuoles for degradation. Plant J. 39 (2004) 393-402
41. Yang Y.D., Elamawi R., Bubeck J., Pepperkok R., Ritzenthaler C., and Robinson D.G. Dynamics of COPII vesicles and the Golgi apparatus in cultured Nicotiana tabacum BY-2 cells provides evidence for transient association of Golgi stacks with endoplasmic reticulum exit sites. Plant Cell 17 (2005) 1513-1531
42. Zheng H.Q., Camacho L., Wee E., Henri B.A., Legend J., Leaver C.J., Malho R., Hussey P.J., and Moore I. A Rab-E GTPase mutant acts downstream of the Rab-D subclass in biosynthetic membrane traffic to the plasma membrane in tobacco leaf epidermis. Plant Cell 17 (2005) 2020-2036
43. Zheng H.Q., Kunst L., Hawes C., and Moore I. A GFP-based assay reveals a role for RHD3 in transport between the endoplasmic reticulum and Golgi apparatus. Plant J. 37 (2004) 398-414