Mitochondrial DNA variation of the west-coast rock lobster, Jasus lalandii: Marked genetic diversity differences among sampling sites

Marine and Freshwater Research

Volumn 58, Issue 12, 2007, Pages 1130-1135

  Matthee, Conrad A ^a   Cockcroft, Andrew C ^b   Gopal, Keshni ^a,c   Von Der Heyden, Sophie ^a  

^a STELLENBOSCH UNIVERSITY   (South Africa)

^b MARINE AND COASTAL MANAGEMENT   (South Africa)

^c SOUTH AFRICAN NATIONAL BIODIVERSITY INSTITUTE   (South Africa)

Author keywords

16S rRNA; Population structure; South Africa

Indexed keywords

COASTAL ZONE; DISPERSAL; GENETIC VARIATION; LARVAL TRANSPORT; LOBSTER; MITOCHONDRIAL DNA; RNA; STOCK ASSESSMENT; TEMPERATE ENVIRONMENT;

AFRICA; CAPE HANGKLIP; HOUT BAY; SOUTH AFRICA; SOUTHERN AFRICA; SUB-SAHARAN AFRICA; WESTERN CAPE;

JASUS LALANDII;

EID: 37149030898     PISSN: 13231650     EISSN: None     Source Type: Journal    
DOI: 10.1071/MF07138     Document Type: Article

References (42)

1. Atkinson, L. J., and Branch, G. M. (2003). Longshore movements of adult male Jasus lalandii: evidence from long-term tag recaptures. South African Journal of Marine Science 25, 387-390.
2. Bandelt, H. J., Forster, P., and Röhl, A. (1999). Median-joining networks for inferring intraspecific phylogenies. Molecular Biology and Evolution 16, 37-48.
3. Booth, J. D. (1997). Long-distance movements in Jasus spp. and their role in larval recruitment. Bulletin of Marine Science 61, 111-128.
4. Booth, J. D. (2006). Jasus species. In 'Lobsters: Biology, Management, Aquaculture and Fisheries'. (Ed. B. F. Phillips.) pp. 340-358. (Blackwell Scientific Publications: Oxford.)
5. Booth, J. D., and Ovenden, J. R. (2000). Distribution of Jasus spp. (Decapoda: Palinuridae) phyllosomas in southern waters: implications for larval recruitment. Marine Ecology Progress Series 200, 241-255. doi:10.3354/MEPS200241
6. Brasher, D. J., Ovenden, J. R., Booth, J. D., and White, R. W. G. (1992a). Genetic subdivision of Australian and New Zealand populations of Jasus verreauxi (Decapoda, Palinuridae) - preliminary evidence from the mitochondrial genome. New Zealand Journal of Marine and Freshwater Research 26, 53-58.
7. Brasher, D. J., Ovenden, J. R., and White, R.W. G. (1992b). Mitochondrial-DNA variation and phylogenetic-relationships of Jasus spp (Decapoda, Palinuridae). Journal of Zoology 227, 1-16.
8. Cannas, R., Cau, A., Deiana, A. M., Salvadori, S., and Tagliavini, J. (2006). Discrimination between the Mediterranean spiny lobsters Palinurus elephas and P. mauritanicus (Crustacea: Decapoda) by mitochondrial sequence analysis. Hydrobiologia 557, 1-4. doi:10.1007/S10750-005- 9301-X
9. Chiswell, S. M., and Booth, J. D. (1999). Rock lobster Jasus edwardsii larval retention by the Wairarapa Eddy off New Zealand. Marine Ecology Progress Series 183, 227-240. doi:10.3354/MEPS183227
10. Cockcroft, A. C. (1997). Biochemical composition as a growth predictor in male west coast rock lobster (Jasus lalandii). Marine and Freshwater Research 48, 845-856. doi:10.1071/MF97082
11. Cockcroft, A. C. (2001). Jasus lalandii 'walkouts' or mass strandings in South Africa during the 1990s: an overview. Marine and Freshwater Research 52, 1085-1094. doi:10.1071/MF01100
12. Cockcroft, A. C., and Goosen, P. C. (1995). Shrinkage at moulting in the rock lobster Jasus lalandii and associated changes in reproductive parameters. South African Journal of Marine Science 16, 195-203.
13. Cockcroft, A. C., and Payne, A. I. L. (1999). A cautious fisheries management policy in South Africa: the fisheries for rock lobster. Marine Policy 23, 587-600. doi:10.1016/S0308-597X(98)00045-1
14. Crandall, K. A., and Templeton, A. R. (1993). Empirical tests of some predictions from coalescent theory with applications to intraspecific phylogeny reconstruction. Genetics 134, 959-969.
15. Crandall, K. A., Templeton, A. R., and Sing, C. F. (1994). Intraspecific phylogenies: problems and solutions. In 'Models in Phylogeny Reconstruction'. (Eds R. W. Scotland, D. J. Siebert and D. M. Williams.) pp. 273-279. (Clarendon Press: Oxford.)
16. Dubber, G. G., Branch, G. M., and Atkinson, L. J. (2004). The effects of temperature and diet on the survival, growth and food uptake of aquarium-held postpueruli of the rock lobster Jasus lalandii. Aquaculture 240, 249-266. doi:10.1016/J.AQUACULTURE.2004.06.037
17. Esterhuizen, J. A. (2004). Towards the development of a protocol for rearing juvenile rock lobster, Jasus lalandii. MSc Thesis, Rhodes University, South Africa.
18. Excoffier, L., Laval, G., and Schneider, S. (2005). Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1, 47-50.
19. Fu, Y.-X. (1997). Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147, 915-925.
20. Garcia-Rodriguez, F. J., and Perez-Enriquez, R. (2005). Genetic differentiation of the California spiny lobster Panulirus interruptus (Randall, 1840) along the west coast of the Baja California Peninsula, Mexico. Marine Biology 148, 621-629. doi:10.1007/S00227-005-0101-7
21. Goosen, P. C., and Cockcroft, A. C. (1995). Mean annual growth increments for malewest coast rock lobster Jasus lalandii, 1969-1993. South African Journal of Marine Science 16, 377-386.
22. Gopal, K., Tolley, K. A., Groeneveld, J. C., and Matthee, C. A. (2006). Mitochondrial DNA variation in spiny lobster Palinurus delagoae suggests genetically structured populations in the south-western Indian Ocean. Marine Ecology Progress Series 319, 191-198. doi:10.3354/MEPS319191
23. Grobler, C.A. F., and Noli-Peard, K. R. (1997). Jasus lalandii fishery in post-independence Namibia: monitoring population trends and stock recovery in relation to a variable environment. Marine and Freshwater Research 48, 1015-1022. doi:10.1071/MF97161
24. Harpending, H. C. (1994). Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution. Human Biology 66, 591-600.
25. Jensen, J. L., Bohonak, A. J., and Kelley, S. T. (2005). Isolation by distance, web service. BMC Genetics 6: 13. v.3.14. Available at http://ibdws.sdsu.edu/ [Verified 2 October 2007].
26. Johnston, S. J., and Butterworth, D. S. (2005). Evolution of operational management procedures for the South African west coast rock lobster (Jasus lalandii) fishery. New Zealand Journal of Marine and Freshwater Research 39, 687-702.
27. Kittaka, J. (1994). Culture of phyllosomas of spiny lobster and its application to studies of larval recruitment and aquaculture. Crustaceana 66, 258-270.
28. Maddison, W. P., and Maddison, D. K. (2000). 'MacClade: Analysis of Phylogeny and Character Evolution. Version 4.0.' (Sinauer Associates: Sunderland, MA.)
29. Mayfield, S., Branch, G. M., and Cockcroft, A. C. (2005). Role and efficacy of marine protected areas for the South African rock lobster, Jasus lalandii. Marine and Freshwater Research 56, 913-924. doi:10.1071/MF05060
30. Melville-Smith, R., and van Sittert, L. (2005). Historical commercial west coast rock lobster Jasus lalandii landings in South African waters African. African Journal of Marine Science 27, 33-44.
31. Melville-Smith, R., Goosen, P. C., and Stewart, T. J. (1995). The spiny lobster Jasus lalandii (Edwards, H. Milne, 1837) off the South African coast: inter-annual variations in male growth and female fecundity. Crustaceana 68, 174-183.
32. Newman, G. G. (1973). Assessment and management of some marine stocks in southern Africa. Ph.D. Thesis, University of Stellenbosch.
33. Ovenden, J. R., and Brasher, D. J. (2000). Stock identity of the red (Jasus edwardsii) and green (J. verreauxi) rock lobsters inferred from mitochondrial DNA analysis. In 'Spiny Lobster Management'. (Eds B. F. Phillips, J. S. Cobb and J. Kittaka.) pp. 230-249. (Blackwell Scientific Publications: Oxford.)
34. Ovenden, J. R., Booth, J. D., and Smolenski, A. J. (1997). Mitochondrial DNA phylogeny of red and green rock lobsters (genus Jasus). Marine and Freshwater Research 48, 1131-1136. doi:10.1071/MF97192
35. Palumbi, S. R. (1996). Nucleic acids II: The polymerase chain reaction. In 'Molecular Systematics'. (Eds D. M. Hillis, C. Moritz and B. K. Mable.) pp. 205-247. (Sinauer Associates: Sunderland, MA.)
36. Pollock, D. E. (1986). Review of the fishery for and biology of the Cape rock lobster Jasus lalandii with notes on larval recruitment. Canadian Journal of Fisheries and Aquatic Sciences 43, 2107-2117.
37. Pollock, D. E., Cockcroft, A. C., and Goosen, P. C. (1997). A note on reduced rock lobster growth rates and related environmental anomalies in the southern Benguela, 1988-1995. South African Journal of Marine Science 18, 287-293.
38. Ravago, R. G., and Juinio-Menez, M. A. (2002). Phylogenetic position of the striped-legged forms of the Panulirus longipes (A. Milne-Edwards, 1868) (Decapoda, Palinuridae) inferred from mitochondrial DNA sequences. Crustaceana 75, 1047-1059. doi:10.1163/156854002763270455
39. Sarver, S. K., Silberman, J. D., and Walsh, P. J. (1998). Mitochondrial DNA sequence evidence supporting the recognition of two subspecies or species of the Florida spiny lobster Panulirus argus. Journal of Crustacean Biology 18, 177-186. doi:10.2307/1549532
40. Schneider, S., and Excoffier, L. (1999). Estimation of past demographic parameters from the distribution of pairwise differences when mutation rates vary among sites: application to human mitochondrial DNA. Genetics 152, 1079-1089.
41. Tolley, K. A., Groeneveld, J. C., Gopal, K., and Matthee, C. A. (2005). MtDNA panmixia in spiny lobster, Palinurus gilchristi, supports a recent population expansion. Marine Ecology Progress Series 297, 225-231. doi:10.3354/MEPS297225
42. von der Heyden, S., Groeneveld, J. C., and Matthee, C. A. (in press). Long current to nowhere? - Genetic connectivity of Jasus tristani populations in the southern Atlantic Ocean. African Journal of Marine Science.