Sympatric genetic differentiation of a generalist pathogenic fungus, Botrytis cinerea, on two different host plants, grapevine and bramble

Journal of Evolutionary Biology

Volumn 21, Issue 1, 2008, Pages 122-132

  Fournier, E ^a   Giraud, T ^b  

^a INRA Institut National de la Recherche Agronomique   (France)

^b UNIVERSITÉ PARIS SUD   (France)

Author keywords

Ecological speciation; Fungi; Host races; Pathogen; Reduced viability of immigrants; Rubus; Specialization; Sympatric speciation; Vitis

Indexed keywords

BAYESIAN ANALYSIS; COEVOLUTION; DICOTYLEDON; DIVERGENCE; FUNGUS; GENE FLOW; GENERALIST; GENETIC DIFFERENTIATION; GRAPHICAL METHOD; HOST PLANT; HOST USE; MOLECULAR ANALYSIS; PATHOGEN; SPECIALIZATION; SPECIATION (BIOLOGY); SYMPATRY; VINE;

ASCOMYCOTA; BOTRYOTINIA FUCKELIANA; FUNGI; RUBUS; VITACEAE; VITIS;

EID: 37149014416     PISSN: 1010061X     EISSN: 14209101     Source Type: Journal    
DOI: 10.1111/j.1420-9101.2007.01462.x     Document Type: Article

References (47)

1. Agapow, P.-M. Burt, A. 2001. Indices of multilocus linkage disequilibrium. Mol. Ecol. Notes 1 : 101 102.
2. Albertini, C., Thébaud, G., Fournier, E. Leroux, P. 2002. Eburicol 14a-demethylase gene (cyp51) polymorphism and speciation in Botrytis cinerea. Mycol. Res. 106 : 1171 1178.
3. Antonovics, J., Hood, M.E. Partain, J. 2002. The ecology and genetics of a host-shift: Microbotryum as a model system. Am. Nat. 160 : S40 S53.
4. Brown, A.H.D., Feldman, M.W. Nevo, E. 1980. Multilocus structure of natural populations of Hordeum spontaneum. Genetics 96 : 523 536.
5. Bucheli, E., Gautschi, B. Shykoff, J.A. 2001. Differences in population structure of the anther smut fungus Microbotryum violaceum on two closely related host species, Silene latifolia and S. dioica. Mol. Ecol. 10 : 285 294.
6. Bush, G.L. 1994. Sympatric speciation in animals: new wine in old bottles. Trends Ecol. Evol. 9 : 285 288.
7. Coyne, J.A. Orr, H.A. 1999. The evolutionary genetics of speciation. In : Evolution of Biological Diversity (A. E. Magguran R. M. Ray, eds pp. 1 36. Oxford University Press, Oxford, UK.
8. Dickinson, H. Antonovics, J. 1973. Theoretical considerations of sympatric divergence. Am. Nat. 107 : 256 274.
9. Diehl, S.R. Bush, G.L. 1989. The role of habitat preference in adaptation and speciation. In : Speciation and its Consequences (D. Otte J. A. Endler, eds Sinauer, Sunderland, MA, pp. 345 365.
10. Diolez, A., Marches, F., Fortini, D. Brygoo, Y. 1995. Boty, a long-terminal-repeat retroelement in the phytopathogenic fungus Botrytis cinerea. Appl. Environ. Microbiol. 61 : 103 108.
11. Dyer, R.J. Nason, J.D. 2004. Population graphs: the graph theoretic shape of genetic structure. Mol. Ecol. 13 : 1713 1727.
12. Falush, D., Stephens, M. Pritchard, J. 2003. Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics 164 : 1567 1587.
13. Felsenstein, J. 1981. Scepticism towards Santa Rosalia, or why are there so few kinds of animals? Evolution 35 : 124 138.
14. Fournier, E., Giraud, T., Loiseau, A., Vautrin, D., Estoup, A., Solignac, M., Cornuet, J.M. Brygoo, Y. 2002. Characterization of nine polymorphic microsatellite loci in the phytopathogenic fungus Botrytis cinerea (Ascomycota). Mol. Ecol. Notes 2 : 253 255.
15. Fournier, E., Lévis, C., Fortini, D., Giraud, T., Leroux, P. Brygoo, Y. 2003. Characterization of Bc-hch, the Botrytis cinerea homolog of the Neurospora crassa het-c vegetative incompatibility locus, and its use as a population marker. Mycologia 95 : 951 961.
16. Fournier, E., Giraud, T. Brygoo, Y. 2005. Partition of the Botrytis cinerea complex in France using multiple gene genealogies. Mycologia 97 : 1251 1267.
17. Frantz, A., Plantegenest, M. Simon, J.-C. 2006. Ecological specialization correlates with genotypic differentiation in sympatric host-populations of the pea aphid. J. Evol. Biol. 19 : 392 401.
18. Gavrilets, S. 2004. Fitness Landscapes and the Origin of Species. Monographs in population biology. Princeton University Press, Princeton, NJ.
19. Giraud, T. 2004. Patterns of within population dispersion and mating of the fungus Microbotryum violaceum parasitizing the plant Silene latifolia. Heredity 93 : 559 565.
20. Giraud, T. 2006. Speciation: selection against migrant pathogens: the immigrant inviability barrier in pathogens. Heredity 97 : 316 318.
21. Giraud, T., Fortini, D., Lévis, C., Leroux, P. Brygoo, Y. 1997. RFLP markers show genetic recombination in Botryotinita fuckeliana (Botrytis cinerea) and transposable elements reveal two sympatric species. Mol. Biol. Evol. 14 : 1177 1185.
22. Giraud, T., Fortini, D., Lévis, C., Lamarque, C., Leroux, P., LoBuglio, K. Brygoo, Y. 1999. Two sibling species of the Botrytis cinerea complex, transposa and vacuma, are found in sympatry on numerous host plants. Phytopathology 89 : 967 973.
23. Giraud, T., Villaréal, L.M.M.A., Austerlitz, F., Le Gac, M. Lavigne, C. 2006. Importance of the life cycle in sympatric host race formation and speciation of pathogens. Phytopathology 96 : 280 287.
24. Goudet, J. 1995. FSTAT (vers. 1.2): a computer program to calculate F-statistics. J. Heredity 86 : 485 486.
25. Haubold, B., Travisiano, P.B. Hudson, R.R. 1998. Detecting linkage disequilibrium in bacterial populations. Genetics 150 : 1341 1348.
26. Johnson, P.A., Hoppensteadt, F.C., Smith, J.J. Bush, G.L. 1996. Conditions for sympatric speciation: a diploid model incorporating habitat fidelity and non-habitat assortative mating. Evol. Ecol. 10 : 187 205.
27. Kawecki, T.J. 1998. Red Queen meets Santa Rosalia: arms races and the evolution of host specialization in organisms with parasitic lifestyles. Am. Nat. 152 : 635 651.
28. Kawecki, T. Ebert, D. 2004. Conceptual issues in local adaptation. Ecol. Lett. 7 : 1225 1241.
29. Le Cam, B., Parisi, L. Arene, L. 2002. Evidence of two formae speciales in Venturia inaequalis, responsible for apple and pyracantha scab. Phytopathology 92 : 314 320.
30. Le Gac, M., Hood, M.E., Fournier, E. Giraud, T. 2007. Phylogenetic evidence of host-specific cryptic species in the anther smut fungus. Evolution 16 : 15 26.
31. Lévis, C., Fortini, D. Brygoo, Y. 1997. Flipper, a mobile Fot1-like transposable element in Botrytis cinerea. Mol. Gen. Genet. 254 (6 674 680.
32. Lopez-Villavicencio, M., Enjalbert, J., Hood, M.E., Shykoff, J.A., Raquin, C. Giraud, T. 2005. The anther smut disease on Gypsophila repens: a case of parasite sub-optimal performance following a recent host shift? J. Evol. Biol. 18 : 1293 1303.
33. Ma, Z. Michailides, T.J. 2005. Genetic structure of Botrytis cinerea populations from different host plants in California. Plant Dis. 89 : 1083 1089.
34. Martinez, F., Dubos, B. Fermaud, M. 2005. The role of saprotrophy and virulence in the population dynamics of Botrytis cinerea in vineyards. Phytopathology 95 : 692 700.
35. Matsuda, S. Takamatsu, S. 2003. Evolution of host-parasite relationships of Golovinomyces (Ascomycete: Erysiphaceae) inferred from nuclear rDNA sequences. Mol. Phylogenet. Evol. 27 : 314 327.
36. Maynard-Smith, J., Smith, N.H., O'Rourke, M. Spratt, B.G. 1993. How clonal are bacteria? Proc. Natl. Acad. Sci. USA 90 : 4384 4388.
37. Mayr, E. 1963. Animal Species and Evolution. Harvard University Press, Cambridge.
38. Muñoz, G., Hinrichsen, P., Brygoo, Y. Giraud, T. 2002. Genetic characterisation of Botrytis cinerea populations in Chile. Mycol. Res. 106 : 594 601.
39. Nei, M. 1987. Molecular Evolutionary Genetics. Columbia University Press, New York.
40. Pritchard, J.K., Stephens, P. Donnelly, P. 2000. Inference of population structure using multilocus genotype data. Genetics 155 : 945 959.
41. Rausher, M.D. 1984. The evolution of habitat preference in subdivided populations. Evolution 38 : 596 608.
42. Rice, W.R. 1984. Disruptive selection on habitat preference and the evolution of reproductive isolation: a simulation study. Evolution 38 : 1251 1260.
43. Rice, W.R. 1989. Analyzing tables of statistical tests. Evolution 43 : 223 225.
44. Schardl, C.L., Leuchtmann, A., Chung, K.-R., Penny, D. Siegel, M.R. 1997. Coevolution by common descent of fungal symbiont (Epichloë spp.) and grass hosts. Mol. Biol. Evol. 14 : 133 143.
45. Schneider, S., Roessli, D. Excoffier, L. 2000. Arlequin ver 2.000: A Software for Population Genetics Analysis. Genetic and Biometry Laboratory, University of Geneva, Switzerland.
46. Udovic, D. 1980. Frequency-dependent selection, disruptive selection and the evolution of reproductive isolation. Am. Nat. 116 : 621 641.
47. Weir, B.S. Cockerham, C.C. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38 : 1358 1370.