-
1
-
-
84984932472
-
Exploring the new world of the genome with DNA microarrays
-
Brown PO, Botstein D. Exploring the new world of the genome with DNA microarrays. The Chipping Forecast 1999; 21: 33-7.
-
(1999)
The Chipping Forecast
, vol.21
, pp. 33-37
-
-
Brown, P.O.1
Botstein, D.2
-
2
-
-
0032441150
-
Cluster analysis and display of genome wide expression patterns
-
Eisen MB, Spellman PT, Brown PO, Botstein, D. Cluster analysis and display of genome wide expression patterns. Proceedings of the National Academy of Sciences 1998; 95: 14863-8.
-
(1998)
Proceedings of the National Academy of Sciences
, vol.95
, pp. 14863-14868
-
-
Eisen, M.B.1
Spellman, P.T.2
Brown, P.O.3
Botstein, D.4
-
3
-
-
0033027794
-
Interpreting patterns of gene expression with self-organizing maps: Methods and application to hematopoietic differentiation
-
Tamayo P, Slonim D, Mesirov J, Zhu Q, Kitareewan S, Dmitrovsky E, Lander ES, Golub TR. Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation. Proceedings of the National Academy of Sciences 1999; 96: 2907-12.
-
(1999)
Proceedings of the National Academy of Sciences
, vol.96
, pp. 2907-2912
-
-
Tamayo, P.1
Slonim, D.2
Mesirov, J.3
Zhu, Q.4
Kitareewan, S.5
Dmitrovsky, E.6
Lander, E.S.7
Golub, T.R.8
-
4
-
-
0033028596
-
Systematic determination of genetic network architecture
-
Tavazoie S, Hughes JD, Campbell MJ, Cho RJ, Church GM. Systematic determination of genetic network architecture. Nature Genetics 1999; 22: 281-5.
-
(1999)
Nature Genetics
, vol.22
, pp. 281-285
-
-
Tavazoie, S.1
Hughes, J.D.2
Campbell, M.J.3
Cho, R.J.4
Church, G.M.5
-
5
-
-
0034782618
-
Model-based clustering and data transformations for gene expression data
-
Yeung KY, Fraley C, Murua A, Raftery AE, Ruzzo WL. Model-based clustering and data transformations for gene expression data. Bioinformatics 2001; 17: 977-87.
-
(2001)
Bioinformatics
, vol.17
, pp. 977-987
-
-
Yeung, K.Y.1
Fraley, C.2
Murua, A.3
Raftery, A.E.4
Ruzzo, W.L.5
-
7
-
-
0036203115
-
A mixture model-based approach to the clustering of microarray expression data
-
McLachlan GJ, Bean RW, Peel D. A mixture model-based approach to the clustering of microarray expression data. Bioinformatics 2002; 18: 413-22.
-
(2002)
Bioinformatics
, vol.18
, pp. 413-422
-
-
McLachlan, G.J.1
Bean, R.W.2
Peel, D.3
-
8
-
-
0037172724
-
A prediction-based resampling method for estimating the number of clusters in a dataset
-
research0036.1-0036.21
-
Dudoit S, Fridlyand J. A prediction-based resampling method for estimating the number of clusters in a dataset. Genome Biology 2002; 3: research0036.1-0036.21.
-
(2002)
Genome Biology
, vol.3
-
-
Dudoit, S.1
Fridlyand, J.2
-
9
-
-
0037342510
-
Comparisons and validation of statistical clustering techniques for microarray gene expression data
-
Datta S, Datta S. Comparisons and validation of statistical clustering techniques for microarray gene expression data. Bioinformatics 2003; 19: 459-66.
-
(2003)
Bioinformatics
, vol.19
, pp. 459-466
-
-
Datta, S.1
Datta, S.2
-
10
-
-
17944394324
-
Fuzzy c-means method for clustering microarray data
-
Dembele D, Kastner P. Fuzzy c-means method for clustering microarray data. Bioinformatics 2003; 19: 973-80.
-
(2003)
Bioinformatics
, vol.19
, pp. 973-980
-
-
Dembele, D.1
Kastner, P.2
-
13
-
-
0038391443
-
Bagging to improve the accuracy of a clustering procedure
-
Dudoit S, Fridlyand J. Bagging to improve the accuracy of a clustering procedure. Bioinformatics 2003; 19: 1090-9.
-
(2003)
Bioinformatics
, vol.19
, pp. 1090-1099
-
-
Dudoit, S.1
Fridlyand, J.2
-
14
-
-
0035032570
-
Statistical design and the analysis of gene expression microarray data
-
Kerr MA, Churchill GA. Statistical design and the analysis of gene expression microarray data. Genetical Research 2001; 77: 123-8.
-
(2001)
Genetical Research
, vol.77
, pp. 123-128
-
-
Kerr, M.A.1
Churchill, G.A.2
-
15
-
-
0023570352
-
On bootstrapping the likelihood ratio test statistic for the number of components in a normal mixture
-
McLachlan GJ. On bootstrapping the likelihood ratio test statistic for the number of components in a normal mixture. Applied Statistics 1987; 36: 318-24.
-
(1987)
Applied Statistics
, vol.36
, pp. 318-324
-
-
McLachlan, G.J.1
-
16
-
-
0003414440
-
Estimatung the number of clusters in a dataset via the gap statistic
-
Technical Report, Department of Biostatistics, Stanford University, March
-
Tibshirani R, Walther G, Hastie T. Estimatung the number of clusters in a dataset via the gap statistic. Technical Report, Department of Biostatistics, Stanford University, March 2000.
-
(2000)
-
-
Tibshirani, R.1
Walther, G.2
Hastie, T.3
-
17
-
-
0642367624
-
Cluster stability scores for microarray data in cancer studies
-
Retrieved from
-
Smolkin M, Ghosh D. Cluster stability scores for microarray data in cancer studies. BMC Bioinformatics 2003; 4: 1471-2105. Retrieved from http://www.biomedcentral.com
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 1471-2105
-
-
Smolkin, M.1
Ghosh, D.2
-
22
-
-
0037025618
-
-
Broberg P. Ranking genes with respect to differential expression. Genome Biology 2002; 3: preprint0007.1-0007.23. Available at http://genomebiology.com/2002/3/9/preprint/0007.
-
Broberg P. Ranking genes with respect to differential expression. Genome Biology 2002; 3: preprint0007.1-0007.23. Available at http://genomebiology.com/2002/3/9/preprint/0007.
-
-
-
-
23
-
-
0038053155
-
Modified nonparametric approaches to detecting differentially expressed genes in replicated microarray experiments
-
Zhao Y, Pan W. Modified nonparametric approaches to detecting differentially expressed genes in replicated microarray experiments. Bioinformatics 2003; 19: 1046-54.
-
(2003)
Bioinformatics
, vol.19
, pp. 1046-1054
-
-
Zhao, Y.1
Pan, W.2
-
24
-
-
0034601455
-
Molecular classification of cutaneous malignant melanoma by gene expression profiling
-
Bittner M, Meltzer P, Chen Y, Jiang Y, Seftor E, Hendrix M, Radmacher M, Simon R, Yakhini Z, Ben-Dor A, Sampas N, Dougherty E, Wang E, Marincola F, Gooden C, Lueders J, Glatfelter A, Pollock P, Carpten J, Gillanders E, Leja D, Dietrich K, Beaudry C, Berens M, Alberts D, Sondak V. Molecular classification of cutaneous malignant melanoma by gene expression profiling. Nature 2000; 406: 536-40.
-
(2000)
Nature
, vol.406
, pp. 536-540
-
-
Bittner, M.1
Meltzer, P.2
Chen, Y.3
Jiang, Y.4
Seftor, E.5
Hendrix, M.6
Radmacher, M.7
Simon, R.8
Yakhini, Z.9
Ben-Dor, A.10
Sampas, N.11
Dougherty, E.12
Wang, E.13
Marincola, F.14
Gooden, C.15
Lueders, J.16
Glatfelter, A.17
Pollock, P.18
Carpten, J.19
Gillanders, E.20
Leja, D.21
Dietrich, K.22
Beaudry, C.23
Berens, M.24
Alberts, D.25
Sondak, V.26
more..
-
25
-
-
0036012363
-
Statistical issues in the clustering of gene expression data
-
Dalene RG, Debashis G, Erin MC. Statistical issues in the clustering of gene expression data. Statistic Sinica 2002; 12: 219-40.
-
(2002)
Statistic Sinica
, vol.12
, pp. 219-240
-
-
Dalene, R.G.1
Debashis, G.2
Erin, M.C.3
-
26
-
-
0033569406
-
Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
-
Golub TR, Slonim DK, Tamato P, Huard C, Gaasenbeek M, Mesirov JP, Coller H, Loh ML, Downing JR, Caligiuri MA, Bloomfield CD, Lander ES. Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. Science 1999; 286: 531-7.
-
(1999)
Science
, vol.286
, pp. 531-537
-
-
Golub, T.R.1
Slonim, D.K.2
Tamato, P.3
Huard, C.4
Gaasenbeek, M.5
Mesirov, J.P.6
Coller, H.7
Loh, M.L.8
Downing, J.R.9
Caligiuri, M.A.10
Bloomfield, C.D.11
Lander, E.S.12
-
27
-
-
0035923521
-
Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinomas sub-classes
-
Bhattacharjee A, Richards WG, Staunton J, Li C, Monti S, Vasa P, Ladd C, Beheshti J, Bueno R, Gillette M, Loda M, Weber G, Mark EJ, Lander ES, Wong W, Johnson BE, Golub TG, Sugarbaker DJ, Meyerson M. Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinomas sub-classes. Proceedings of the National Academy of Sciences 2001; 98: 13790-5.
-
(2001)
Proceedings of the National Academy of Sciences
, vol.98
, pp. 13790-13795
-
-
Bhattacharjee, A.1
Richards, W.G.2
Staunton, J.3
Li, C.4
Monti, S.5
Vasa, P.6
Ladd, C.7
Beheshti, J.8
Bueno, R.9
Gillette, M.10
Loda, M.11
Weber, G.12
Mark, E.J.13
Lander, E.S.14
Wong, W.15
Johnson, B.E.16
Golub, T.G.17
Sugarbaker, D.J.18
Meyerson, M.19
-
28
-
-
0034050902
-
Systematic variation in gene expression patterns in human cancer cell lines
-
Ross DT, Scherf U, Eisen MB, Perou CM, Rees C, Spellman P, Iyer V, Jeffrey SS, Van de Rijn M, Waltham M, Pergamenschikov A, Lee JC, Lashkari D, Shalon D, Myers TG, Weinstein JN, Botstein D, Brown PO. Systematic variation in gene expression patterns in human cancer cell lines. Nature Genetics 2000; 24: 227-34.
-
(2000)
Nature Genetics
, vol.24
, pp. 227-234
-
-
Ross, D.T.1
Scherf, U.2
Eisen, M.B.3
Perou, C.M.4
Rees, C.5
Spellman, P.6
Iyer, V.7
Jeffrey, S.S.8
Van de Rijn, M.9
Waltham, M.10
Pergamenschikov, A.11
Lee, J.C.12
Lashkari, D.13
Shalon, D.14
Myers, T.G.15
Weinstein, J.N.16
Botstein, D.17
Brown, P.O.18
-
29
-
-
0347201147
-
Multi-class cancer diagnosis using tumor gene expression signatures
-
Ramaswamy S, Tamayo P, Rifkin R, Mukherjee S, Yeang CH, Angelo M, Ladd C, Reich M, Latulippe E, Mesirov JP, Poggio T, Gerald W, Loda M, Lander ES, Golub TR. Multi-class cancer diagnosis using tumor gene expression signatures. Proceedings of the National Academy of Sciences 2001; 98: 15149-54.
-
(2001)
Proceedings of the National Academy of Sciences
, vol.98
, pp. 15149-15154
-
-
Ramaswamy, S.1
Tamayo, P.2
Rifkin, R.3
Mukherjee, S.4
Yeang, C.H.5
Angelo, M.6
Ladd, C.7
Reich, M.8
Latulippe, E.9
Mesirov, J.P.10
Poggio, T.11
Gerald, W.12
Loda, M.13
Lander, E.S.14
Golub, T.R.15
-
30
-
-
0037339466
-
An information theoretic approach for analyzing temporal patterns of gene expression
-
Kasturi J, Acharya R, Ramanathan M. An information theoretic approach for analyzing temporal patterns of gene expression. Bioinformatics 2003; 19: 449-58.
-
(2003)
Bioinformatics
, vol.19
, pp. 449-458
-
-
Kasturi, J.1
Acharya, R.2
Ramanathan, M.3
-
31
-
-
36949020065
-
-
Yeung KY, Ruzzo WL. An empirical study on principal component analysis for clustering gene expression data. Technical Report 2000 UW-CSE-00-11-01, Department of Computer Science and Engineering, University of Washington.
-
Yeung KY, Ruzzo WL. An empirical study on principal component analysis for clustering gene expression data. Technical Report 2000 UW-CSE-00-11-01, Department of Computer Science and Engineering, University of Washington.
-
-
-
|