Change of sludge consortium in response to sequential adaptation to benzene, toluene, and o-xylene

Journal of Microbiology and Biotechnology

Volumn 17, Issue 11, 2007, Pages 1772-1781

  Park, Jae Yeon ^a   Sang, Byoung In ^a  

^a Korea Institute of Science and Technology   (South Korea)

Author keywords

BTX; Clustering analysis; DGGE; Dimensional analysis; Sequential adaptation; Sludge consortium

Indexed keywords

BENZENE; ORTHO XYLENE; TOLUENE;

ACTIVATED SLUDGE; ADAPTATION; ARTICLE; BACTERIUM CULTURE; BACTERIUM IDENTIFICATION; CLUSTER ANALYSIS; CONTROLLED STUDY; DECHLOROMONAS; FLEXIBACTER; MICROBIAL DEGRADATION; NITROSOMONAS; NONHUMAN; NUCLEOTIDE SEQUENCE; PSEUDOMONAS; THAUERA;

ADAPTATION, PHYSIOLOGICAL; BACTERIA; BENZENE; BIODEGRADATION, ENVIRONMENTAL; POLYMERASE CHAIN REACTION; SEWAGE; TOLUENE; XYLENES;

BACTERIA (MICROORGANISMS); DECHLOROMONAS; FLEXIBACTER SP.; NITROSOMONAS SP.; THAUERA;

EID: 36949026169     PISSN: 10177825     EISSN: 17388872     Source Type: Journal    
DOI: None     Document Type: Article

References (33)

1. Ahn, J. H., M. S. Kim, M. C. Kim, J. S. Lim, G. T. Lee, J. K. Yun, T. S. Kim, T. S. Kim, and J. O. Ka. 2006. Analysis of bacterial diversity and community structure in forest soils contaminated with fuel hydrocarbon. J. Microbiol. Biotechnol. 16: 704-715.
2. Ahn, J. H., M. C. Kim, H. C. Shin, M. K. Choi, S. S. Yoon, T. S. Kim, H. G. Song, G. H. Lee, and J. O. Ka. 2006. Improvement of PCR amplication bias for community structure analysis of soil bacteria by denaturing gradient gel electrophoresis, J. Microbiol. Biotechnol. 16: 1561-1569.
3. Alvarez, P. J. J. and T. M. Vogel. 1991. Substrate interactions of benzene, and para-xylene during microbial degradation by pure cultures and mixed culture aquifer slurries. Appl. Environ. Microbiol. 57: 2981-2985.
4. Boon, N., W. De Windt, W. Verstraete, and E. M. Top. 2002. Evaluation of nested PCR-DGGE (denaturing gradient gel electrophoresis) with group-specific 16S rRNA primers for the analysis of bacterial communities from different wastewater treatment plants. FEMS Microbiol. Ecol. 39: 101-112.
5. Casamayor, E. O., R. Massana, S. Benlloch, L. Øvreås, B. Díez, V. J. Goddard, J. M. Gasol, I. Joint, F. R. Valera, and C. P. Alió. 2002. Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern. Environ. Microbiol. 4: 338-348.
6. Cavalca, L., E. D. Amico, and V. Andreoni. 2004. Intrinsic bioremediability of an aromatic hydrocarbon-polluted groundwater: Diversity of bacterial population and toluene monooxygenase genes. Appl. Microbiol. Biotechnol. 64: 576-587.
7. Cho, W. S., E. H. Lee, E. H. Shim, J. S. Kim, H. W. Ryu, and K. S. Cho. 2005. Bacterial communities of biofilms sampled from seepage groundwater contaminated with petroleum oil. J. Microbiol. Biotechnol. 15: 952-964.
8. Deeb, R. A. and L. A. Cohen. 2000. Aerobic biotransformation of gasoline aromatics in multicomponent mixtures. Biorem. J. 4: 171-179.
9. Deeb, R. A., H. Y. Hu, J. R. Hanson, K. M. Scow, and L. A. Cohen. 2001. Substrate interactions in BTEX and MTBE mixtures by an MTBE-degrading isolate. Environ. Sci. Technol. 35: 312-317.
10. Deeb, R. A., H. Y. Hu, J. R. Hanson, K. M. Scow, and L. A. Cohen. 2001. Substrate interactions in BTEX and MTBE mixtures by an MTBE-degrading isolate. Environ. Sci. Technol. 35: 312-317.
11. EPA. Remedial Investigation Report for the Tennessee Products Site Chattanooga, Tennessee; EPA 7740-064-RT-BTWP; U.S. Environmental Protection Agency, Washington, DC, March 1999.
12. Evans, W. C. and G. Fuchs. 1988. Anaerobic degradation of aromatic compounds. Annu. Rev. Microbiol. 42: 289-317.
13. Feris, K. P., K. Hristova, B. Gebreyesus, D. Mackay, and K. M. Scow 2004. A shallow BTEX and MTBE contaminated aquifer supports a diverse microbial community. Microb. Ecol. 48: 589-600.
14. François, A., H. Mathis, D. Godefroy, P. Piveteau, F. Fayolle, and F. Monot. 2002. Biodegradation of methyl tert-butyl ether and other fuel oxygenates by a new strain, Mycobacterium austroafricanum IFP 2012. Appl. Environ. Microbiol. 68: 2754-2762.
15. Goudar, C. T. and K. A. Strevett. 1998. Comparison of relative rates of BTEX biodegradation using respirometry. J. Ind. Microbiol. Biotechnol. 21: 11-18.
16. Häne, B. G., K. Jäger, and H. Drexler. 1993. The Pearson product-moment correlation coefficient is better suited for identification of DNA fingerprint profiles than band matching algorithms. Electrophoresis 14: 967-972.
17. Koizumi, Y., J. J. Kelly, T. Nakagawa, H. Urakawa, S. E. Fantroussi, S. A. Muzani, M. Fukui, Y. Urushigawa, and D. A. Stahl. 2002. Parallel characterization of anaerobic toluene- and ethylbenzene-degrading microbial consortia by PCR-denaturing gradient gel electrophoresis, RNA-DNA membrane hybridization, and DNA microarray technology. Appl. Microbiol. Biotechnol. 68: 3215-3225.
18. Lin, B., M. Braster, B. M. van Breukelen, H. W. van Verseveld, H. V. Westerhoff, and W. F. M. Röling. 2005. Geobacteraceae community composition is related to hydrochemistry and biodegradation in an iron-reducing aquifer polluted by a neighboring landfill. Appl. Environ. Microbiol. 71: 5983-5991.
19. Lovley, D. R., J. D. Coates, J. C. Woodward, and E. J. P. Phillips. 1995. Benzene oxidation coupled to sulfate reduction. Appl. Environ. Microbiol. 61: 953-958.
20. Martine, W. R., E. K. Hamann, and S. Hartmans. 1997. Biofiltration of air containing low concentrations of propene using a membrane bioreactor. Biotechnol. Prog. 13: 380-386.
21. McLellan, S. L., A. D. Daniels, and A. K. Salmore. 2003. Genetic characterization of Escherichia coli populations from host sources of fecal pollution by using DNA fingerprinting. Appl. Environ. Microbiol. 69: 2587-2594.
22. Muller, R. 1992. Bacterial degradation of xenobiotics, pp. 35-57. In J. C. Fry, G. M. Gadd, R. A. Herbert, C. W. Jones, and I. A. Watson-Craik (eds.), Microbial Control of Pollution. Cambridge University Press, Cambridge.
23. Prenafeta-Boldú, F. X., J. Vervoort, J. T. C. Grotenhuis, and J. W. van Groenestijn. 2002. Substrate interactions during the biodegradation of benzene, toluene, ethylbenzene, and xylene (BTEX) hydrocarbons by the fungus Cladophialophoro sp. strain T1. Appl. Environ. Microbiol. 68: 2660-2665.
24. Ralebitso, T. K., W. F. M. Röling, M. Braster, E. Senior, and H. W. van Verseveld. 2000. 16S rRNA-based characterization of BTX-catabolizing microbial associations isolated from a South African sandy soil. Biodegradation 11: 351-357.
25. Rooney-Varga, J., R. Anderson, J. L. Fraga, D. Ringelberg, and D. R. Lovley. 1999. Microbial communities associated with anaerobic benzene degradation in a petroleum-contaminated aquifer. Appl. Microbiol. Biotechnol. 65: 3056-3063.
26. Schneegurt, M. A. and C. F. Kulpa Jr. 1998. The application of molecular techniques in environmental biotechnology for monitoring microbial systems. Biotechnol. Appl. Biochem. 27: 73-79.
27. Sigler, W. V., C. Miniaci, and J. Zeyer. 2004. Electrophoresis time impacts the denaturing gradient gel electrophoresis-based assessment of bacterial community structure. J. Microbiol. Methods 57: 17-22.
28. Smalla, K., U. Wachtendorf, H. Heuer, W. T. Liu, and L. J. Forney. 1998. Analysis of Biolog-GN substrate utilization patterns by microbial communities. Appl. Microbiol. Biotechnol. 64: 1220-1225.
29. Smets, B. F. and P. H. Pritchard. 2003. Elucidating the microbial component of natural attenuation. Curr. Opin. Biotechnol. 14: 283-288.
30. Solano-Serena, F., R. Marchal, M. Ropars, J. M. Lebeault, and J. P. Vandecasteele. 1999. Biodegradation of gasoline: Kinetics, mass balance and fate of individual hydrocarbons. J. Appl. Microbiol. 86: 1008-1016.
31. Song, B. K., L. Y. Young, and N. J. Palleroni. 1998. identification of denitrifier strain T1 as Thauera aromatica and proposal for emendation of the genus Thauera definition. Int. J. Syst. Bacteriol. 48: 889-894.
32. Strauss, J. M., K. J. Riedel, and C. A. du Plessis. 2004. Mesophilic and thermophilic BTEX substrate interactions for a toluene-acclimatized biofilter. Appl. Microbiol. Biotechnol. 64: 855-861.
33. Vanbroekhoven, K., A. Ryugaert, P. Wattiau, R. De Mot, and D. Springael. 2004. Acinetobacter diversity in environmental samples assessed by 16S rRNA gene PCR-DGGE fingerprinting. FEMS Microbiol. Ecol. 50: 37-50.