-
1
-
-
9744277560
-
Nitroalkane oxidase, a carbanion-forming flavoprotein homologous to Acyl-CoA dehydrogenase
-
Fitzpatrick, P. F., Orville, A. M., Nagpal, A., and Valley, M. P. (2005) Nitroalkane oxidase, a carbanion-forming flavoprotein homologous to Acyl-CoA dehydrogenase, Arch. Biochem. Biophys. 433, 157-165.
-
(2005)
Arch. Biochem. Biophys
, vol.433
, pp. 157-165
-
-
Fitzpatrick, P.F.1
Orville, A.M.2
Nagpal, A.3
Valley, M.P.4
-
2
-
-
0038298092
-
Inactivation of nitroalkane oxidase upon mutation of the active site base and rescue with a deprotonated substrate
-
Valley, M. P., and Fitzpatrick, P. F. (2003) Inactivation of nitroalkane oxidase upon mutation of the active site base and rescue with a deprotonated substrate, J. Am. Chem. Soc. 23, 8738-8739.
-
(2003)
J. Am. Chem. Soc
, vol.23
, pp. 8738-8739
-
-
Valley, M.P.1
Fitzpatrick, P.F.2
-
3
-
-
0028935332
-
Substituted alcohols as mechanistic probes of alcohol oxidase
-
Menon, V., Hsieh, C.-T., and Fitzpatrick, P. F. (1995) Substituted alcohols as mechanistic probes of alcohol oxidase, Bioorg. Chem. 23, 42-53.
-
(1995)
Bioorg. Chem
, vol.23
, pp. 42-53
-
-
Menon, V.1
Hsieh, C.-T.2
Fitzpatrick, P.F.3
-
4
-
-
0029839452
-
2
-
2, Proc. Natl. Acad. Sci. U.S.A. 93, 7496-7501.
-
(1996)
Proc. Natl. Acad. Sci. U.S.A
, vol.93
, pp. 7496-7501
-
-
Mattevi, A.1
Vanoni, M.A.2
Todone, F.3
Rizzi, M.4
Teplyakov, A.5
Coda, A.6
Bolognesi, M.7
Curti, B.8
-
5
-
-
0034722962
-
Nitrogen isotope effects as probes of the mechanism of D-amino acid oxidase
-
Kurtz, K. A., Rishavy, M. A., Cleland, W. W., and Fitzpatrick, P. F. (2000) Nitrogen isotope effects as probes of the mechanism of D-amino acid oxidase, J. Am. Chem. Soc. 122, 12896-12897.
-
(2000)
J. Am. Chem. Soc
, vol.122
, pp. 12896-12897
-
-
Kurtz, K.A.1
Rishavy, M.A.2
Cleland, W.W.3
Fitzpatrick, P.F.4
-
6
-
-
0034860788
-
Substrate dehydrogenation by flavoproteins
-
Fitzpatrick, P. F. (2001) Substrate dehydrogenation by flavoproteins, Acc. Chem. Res. 34, 299-307.
-
(2001)
Acc. Chem. Res
, vol.34
, pp. 299-307
-
-
Fitzpatrick, P.F.1
-
7
-
-
0346963173
-
2, consistent with a hydride transfer mechanism
-
2, consistent with a hydride transfer mechanism, Biochemistry 42, 15208-15214.
-
(2003)
Biochemistry
, vol.42
, pp. 15208-15214
-
-
Sobrado, P.1
Fitzpatrick, P.F.2
-
8
-
-
1942485882
-
Carbanion versus hydride transfer mechanisms in flavoprotein-catalyzed dehydrogenations
-
Fitzpatrick, P. F. (2004) Carbanion versus hydride transfer mechanisms in flavoprotein-catalyzed dehydrogenations, Bioorg. Chem. 32, 125-139.
-
(2004)
Bioorg. Chem
, vol.32
, pp. 125-139
-
-
Fitzpatrick, P.F.1
-
10
-
-
27844574240
-
Determination of a large reorganization energy barrier for hydride abstraction by glucose oxidase
-
Brinkley, D. W., and Roth, J. P. (2005) Determination of a large reorganization energy barrier for hydride abstraction by glucose oxidase, J. Am. Chem. Soc. 127, 15720-15721.
-
(2005)
J. Am. Chem. Soc
, vol.127
, pp. 15720-15721
-
-
Brinkley, D.W.1
Roth, J.P.2
-
12
-
-
34250852848
-
Insights into the mechanism of flavoprotein-catalyzed amine oxidation from nitrogen isotope effects on the reaction of N-methyltryptophan oxidase
-
Ralph, E. C., Hirschi, J. S., Anderson, M. A., Cleland, W. W., Singleton, D. A., and Fitzpatrick, P. F. (2007) Insights into the mechanism of flavoprotein-catalyzed amine oxidation from nitrogen isotope effects on the reaction of N-methyltryptophan oxidase, Biochemistry 46, 7655-7664.
-
(2007)
Biochemistry
, vol.46
, pp. 7655-7664
-
-
Ralph, E.C.1
Hirschi, J.S.2
Anderson, M.A.3
Cleland, W.W.4
Singleton, D.A.5
Fitzpatrick, P.F.6
-
13
-
-
0030570782
-
Kinetic mechanism and substrate specificity of nitroalkane oxidase
-
Heasley, C. J., and Fitzpatrick, P. F. (1996) Kinetic mechanism and substrate specificity of nitroalkane oxidase, Biochem. Biophys. Res. Commun. 225, 6-10.
-
(1996)
Biochem. Biophys. Res. Commun
, vol.225
, pp. 6-10
-
-
Heasley, C.J.1
Fitzpatrick, P.F.2
-
14
-
-
0038613012
-
Reductive half-reaction of nitroalkane oxidase: Effect of mutation of the active site aspartate to glutamate
-
Valley, M. P., and Fitzpatrick, P. F. (2003) Reductive half-reaction of nitroalkane oxidase: effect of mutation of the active site aspartate to glutamate, Biochemistry 42, 5850-5856.
-
(2003)
Biochemistry
, vol.42
, pp. 5850-5856
-
-
Valley, M.P.1
Fitzpatrick, P.F.2
-
15
-
-
0031054970
-
Identification of the naturally occurring flavin of nitroalkane oxidase from Fusarium oxysporum as a 5-nitrobutyl-FAD and conversion of the enzyme to the active FAD-containing form
-
Gadda, C., Edmondson, R. D., Russel, D. H., and Fitzpatrick, P. F. (1997) Identification of the naturally occurring flavin of nitroalkane oxidase from Fusarium oxysporum as a 5-nitrobutyl-FAD and conversion of the enzyme to the active FAD-containing form, J. Biol. Chem. 272, 5563-5570.
-
(1997)
J. Biol. Chem
, vol.272
, pp. 5563-5570
-
-
Gadda, C.1
Edmondson, R.D.2
Russel, D.H.3
Fitzpatrick, P.F.4
-
16
-
-
31544467044
-
Crystal structures of nitroalkane oxidase: Insights into the reaction mechanism from a covalent complex of the flavoenzyme trapped during turnover
-
Nagpal, A., Valley, M. P., Fitzpatrick, P. F., and Orville, A. M. (2006) Crystal structures of nitroalkane oxidase: insights into the reaction mechanism from a covalent complex of the flavoenzyme trapped during turnover, Biochemistry 45, 1138-1150.
-
(2006)
Biochemistry
, vol.45
, pp. 1138-1150
-
-
Nagpal, A.1
Valley, M.P.2
Fitzpatrick, P.F.3
Orville, A.M.4
-
17
-
-
13944254325
-
Establishing the kinetic competency of the cationic inline intermediate in nitroalkane oxidase
-
Valley, M. P., Tichy, S. E., and Fitzpatrick, P. F. (2005) Establishing the kinetic competency of the cationic inline intermediate in nitroalkane oxidase, J. Am. Chem. Soc. 127, 2062-2066.
-
(2005)
J. Am. Chem. Soc
, vol.127
, pp. 2062-2066
-
-
Valley, M.P.1
Tichy, S.E.2
Fitzpatrick, P.F.3
-
18
-
-
0028108347
-
Activation of molecular oxygen by flavins and flavoproteins
-
Massey, V. (1994) Activation of molecular oxygen by flavins and flavoproteins, J. Biol. Chem. 269, 22459-22462.
-
(1994)
J. Biol. Chem
, vol.269
, pp. 22459-22462
-
-
Massey, V.1
-
19
-
-
0033558778
-
Substrate specificity of a nitroalkane oxidizing enzyme
-
Gadda, G., and Fitzpatrick, P. F. (1999) Substrate specificity of a nitroalkane oxidizing enzyme, Arch. Biochem. Biophys. 363, 309-313.
-
(1999)
Arch. Biochem. Biophys
, vol.363
, pp. 309-313
-
-
Gadda, G.1
Fitzpatrick, P.F.2
-
20
-
-
0034306863
-
Use of pH and kinetic isotope effects to dissect the effects of substrate size on binding and catalysis by nitroalkane oxidase
-
Gadda, G., Choe, D. Y., and Fitzpatrick, P. F. (2000) Use of pH and kinetic isotope effects to dissect the effects of substrate size on binding and catalysis by nitroalkane oxidase, Arch. Biochem. Biophys. 382, 138-144.
-
(2000)
Arch. Biochem. Biophys
, vol.382
, pp. 138-144
-
-
Gadda, G.1
Choe, D.Y.2
Fitzpatrick, P.F.3
-
21
-
-
36849058547
-
Kinetic isotope effects in proton-transfer reactions
-
2nd ed, pp, Cornell University Press, Ithaca
-
Bell, R. P. (1973) Kinetic isotope effects in proton-transfer reactions, in The Proton in Chemistry. 2nd ed., pp 250-296, Cornell University Press, Ithaca.
-
(1973)
The Proton in Chemistry
, pp. 250-296
-
-
Bell, R.P.1
-
22
-
-
0002767827
-
The principle of nonperfect synchronization: More than a qualitative concept?
-
Bernasconi, C. F. (1992) The principle of nonperfect synchronization: More than a qualitative concept?, Acc. Chem. Res. 25, 9-16.
-
(1992)
Acc. Chem. Res
, vol.25
, pp. 9-16
-
-
Bernasconi, C.F.1
-
23
-
-
2442661476
-
Comparison of enzymatic and non-enzymatic nitroethane anion formation: Thermodynamics and contribution of tunneling
-
Valley, M. P., and Fitzpatrick, P. F. (2004) Comparison of enzymatic and non-enzymatic nitroethane anion formation: thermodynamics and contribution of tunneling, J. Am. Chem. Soc. 126, 6244-6245.
-
(2004)
J. Am. Chem. Soc
, vol.126
, pp. 6244-6245
-
-
Valley, M.P.1
Fitzpatrick, P.F.2
-
24
-
-
0037022634
-
Cloning of nitroalkane oxidase from Fusarium oxysporum identifies a new member of the acyl-CoA dehydrogenase superfamily
-
Daubner, S. C., Gadda, G., Valley, M. P., and Fitzpatrick, P. F. (2002) Cloning of nitroalkane oxidase from Fusarium oxysporum identifies a new member of the acyl-CoA dehydrogenase superfamily, Proc. Nat. Acad. Sci. U.S.A. 99, 2702-2707.
-
(2002)
Proc. Nat. Acad. Sci. U.S.A
, vol.99
, pp. 2702-2707
-
-
Daubner, S.C.1
Gadda, G.2
Valley, M.P.3
Fitzpatrick, P.F.4
-
25
-
-
0842330598
-
Acyl-CoA dehydrogenases. A mechanistic overview
-
Ghisla, S., and Thorpe, C. (2004) Acyl-CoA dehydrogenases. A mechanistic overview, Eur. J. Biochem. 271, 494-508.
-
(2004)
Eur. J. Biochem
, vol.271
, pp. 494-508
-
-
Ghisla, S.1
Thorpe, C.2
-
26
-
-
0029040665
-
Structure and mechanism of action of the Acyl-CoA dehydrogenases
-
Thorpe, C., and Kim, J. P. (1995) Structure and mechanism of action of the Acyl-CoA dehydrogenases, FASEB J. 9, 718-725.
-
(1995)
FASEB J
, vol.9
, pp. 718-725
-
-
Thorpe, C.1
Kim, J.P.2
-
27
-
-
0032574753
-
Biochemical and physical characterization of the active FAD-containing form of nitroalkane oxidase from Fusarium oxysporum
-
Gadda, G., and Fitzpatrick, P. F. (1998) Biochemical and physical characterization of the active FAD-containing form of nitroalkane oxidase from Fusarium oxysporum, Biochemistry 37, 6154-6164.
-
(1998)
Biochemistry
, vol.37
, pp. 6154-6164
-
-
Gadda, G.1
Fitzpatrick, P.F.2
-
28
-
-
9744229592
-
Crystallization and preliminary analysis of active nitroalkane oxidase in three crystal forms
-
Nagpal, A., Valley, M. P., Fitzpatrick, P. F., and Orville, A. M. (2004) Crystallization and preliminary analysis of active nitroalkane oxidase in three crystal forms, Acta. Crystallogr. Sect. D: Biol. Crystallogr. 60, 1456-1460.
-
(2004)
Acta. Crystallogr. Sect. D: Biol. Crystallogr
, vol.60
, pp. 1456-1460
-
-
Nagpal, A.1
Valley, M.P.2
Fitzpatrick, P.F.3
Orville, A.M.4
-
29
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski, Z., and Minor, W. (1997) Processing of X-ray diffraction data collected in oscillation mode, Methods Enzymol. 276, 307-326.
-
(1997)
Methods Enzymol
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
32
-
-
0034673122
-
Iso-mechanism of nitroalkane oxidase: 1. Inhibition studies and activation by imidazole
-
Gadda, G., and Fitzpatrick, P. F. (2000) Iso-mechanism of nitroalkane oxidase: 1. Inhibition studies and activation by imidazole, Biochemistry 39, 1400-1405.
-
(2000)
Biochemistry
, vol.39
, pp. 1400-1405
-
-
Gadda, G.1
Fitzpatrick, P.F.2
-
33
-
-
28444447058
-
Solvent polarization and kinetic isotope effects in nitroethane deprotonation and implications to the nitroalkane oxidase reactionep
-
Major, D. T., York, D. M., and Gao, J. (2005) Solvent polarization and kinetic isotope effects in nitroethane deprotonation and implications to the nitroalkane oxidase reactionep J. Am. Chem. Soc. 127, 16374-16375.
-
(2005)
J. Am. Chem. Soc
, vol.127
, pp. 16374-16375
-
-
Major, D.T.1
York, D.M.2
Gao, J.3
-
34
-
-
33750052269
-
Controlling electron transfer in Acyl-CoA oxidases and dehydrogenases: A structural view
-
Mackenzie, J., Pedersen, L., Arent, S., and Henriksen, A. (2006) Controlling electron transfer in Acyl-CoA oxidases and dehydrogenases: a structural view, J. Biol. Chem. 281, 31012-31020.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 31012-31020
-
-
Mackenzie, J.1
Pedersen, L.2
Arent, S.3
Henriksen, A.4
-
36
-
-
33745713811
-
On the contribution of the positively charged headgroup of choline to substrate binding and catalysis in the reaction catalyzed by choline oxidase
-
Gadda, G., Fan, F., and Hoang, J. V. (2006) On the contribution of the positively charged headgroup of choline to substrate binding and catalysis in the reaction catalyzed by choline oxidase, Arch. Biochem. Biophys. 451, 182-187.
-
(2006)
Arch. Biochem. Biophys
, vol.451
, pp. 182-187
-
-
Gadda, G.1
Fan, F.2
Hoang, J.V.3
-
37
-
-
0021093567
-
The chemistry of a 1,5-diblocked flavin. 2. Proton and electron transfer steps in the reaction of dihydroflavins with oxygen
-
Eberlein, G., and Bruice, T. C. (1983) The chemistry of a 1,5-diblocked flavin. 2. Proton and electron transfer steps in the reaction of dihydroflavins with oxygen, J. Am. Chem. Soc. 105, 6685-6697.
-
(1983)
J. Am. Chem. Soc
, vol.105
, pp. 6685-6697
-
-
Eberlein, G.1
Bruice, T.C.2
-
38
-
-
0014670386
-
The reactivity of flavoproteins with sulfite possible relevance to the problem of oxygen reactivity
-
Massey, V., Müller, F., Feldberg, R., Schuman, M., Sullivan, P. A., Howell, L. G., Mayhew, S. G., Matthews, R. G., and Foust, G. P. (1969) The reactivity of flavoproteins with sulfite possible relevance to the problem of oxygen reactivity, J. Biol. Chem. 244, 3999-4006.
-
(1969)
J. Biol. Chem
, vol.244
, pp. 3999-4006
-
-
Massey, V.1
Müller, F.2
Feldberg, R.3
Schuman, M.4
Sullivan, P.A.5
Howell, L.G.6
Mayhew, S.G.7
Matthews, R.G.8
Foust, G.P.9
-
39
-
-
0025819901
-
Reactivity of medium-chain acyl-CoA dehydrogenase toward molecular oxygen
-
Wang, R., and Thorpe, C. (1991) Reactivity of medium-chain acyl-CoA dehydrogenase toward molecular oxygen, Biochemistry 30, 7895-7901.
-
(1991)
Biochemistry
, vol.30
, pp. 7895-7901
-
-
Wang, R.1
Thorpe, C.2
-
40
-
-
0033614811
-
Nature of oxygen activation in glucose oxidase from Aspergillus niger: The importance of electrostatic stabilization in superoxide formation
-
Su, Q., and Klinman, J. P. (1999) Nature of oxygen activation in glucose oxidase from Aspergillus niger: The importance of electrostatic stabilization in superoxide formation, Biochemistry 38, 8572-8581.
-
(1999)
Biochemistry
, vol.38
, pp. 8572-8581
-
-
Su, Q.1
Klinman, J.P.2
-
41
-
-
9444274813
-
2 probed using chemically modified flavins bound to glucose oxidase
-
2 probed using chemically modified flavins bound to glucose oxidase, J. Am. Chem. Soc. 126, 15120-15131.
-
(2004)
J. Am. Chem. Soc
, vol.126
, pp. 15120-15131
-
-
Roth, J.P.1
Wincek, R.2
Nodet, G.3
Edmondson, D.E.4
McIntire, W.S.5
Klinman, J.P.6
|