Microbial activity and accumulation of organic matter in the burrow of the mud shrimp, Upogebia major (Crustacea: Thalassinidea)

Marine Biology

Volumn 153, Issue 3, 2008, Pages 277-283

  Kinoshita, K ^a   Wada, M ^b   Kogure, K ^b   Furota, T ^c  

^a PREFECTURAL UNIVERSITY OF KUMAMOTO   (Japan)

^b UNIVERSITY OF TOKYO   (Japan)

^c TOHO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ABUNDANCE; BIOACCUMULATION; BURROW; CHLOROPHYLL A; CRUSTACEAN; MICROBIAL ACTIVITY; MICROBIAL COMMUNITY; NUTRIENT ENRICHMENT; ORGANIC MATTER; TIDAL FLAT;

ASIA; EURASIA; FAR EAST; HONSHU; JAPAN; KANTO; TOKYO BAY;

BACTERIA (MICROORGANISMS); CRUSTACEA; DECAPODA (CRUSTACEA); THALASSINIDEA; UPOGEBIA MAJOR; UPOGEBIIDAE;

EID: 36849029108     PISSN: 00253162     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00227-007-0802-1     Document Type: Article

References (32)

1. Allanson BR, Skinner D, Imberger J (1992) Flow in prawn burrows. Estuar Coast Shelf Sci 35:253-266. doi: 10.1016/S0272-7714(05)80047-2
2. Aller RC, Yingst YJ, Ullman WJ (1983) Comparative biogeochemistry of water in intertidal Onuphis (polychaeta) and Upogebia (crustacea) burrows: temporal patterns and causes. J Mar Res 41:571-604
3. Astall CM, Taylor AC, Atkinson RJA (1997) Behavioural and physiological implication of a burrow-dwelling lifestyle for two species of upogebiid mud-shrimp (Crustacea: Thalassinidea). Estuar Coast Shelf Sci 44:155-168. doi: 10.1006/ecss.1996.0207
4. Bird FL, Boon PI, Nichols PD (2000) Physicochemical and microbial properties of burrows of the deposit-feeding thalassinidean ghost shrimp Biffarius arenosus (Decapoda: Callianassidae). Estuar Coast Shelf Sci 51:279-291. doi: 10.1006/ecss.2000.0676
5. Broberg A (1985) A modified method for studies of electron transport system activity in freshwater sediments. Hydrobiologia 120:181-187. doi: 10.1007/BF00032140
6. Cadée GC (2001) Sediment dynamics by bioturbating organisms. In: Reise K (ed) Ecological comparisons of sedimentary shores, ecological studies, vol 151. Springer, Berlin, pp 127-148
7. Candisani LC, Sumida PYG, Pires-Vanin AMS (2001) Burrow morphology and mating behavior of the thalassinidean shrimp Upogebia noronhensis. J Mar Biol Ass UK 81:799-803. doi: 10.1017/S0025315401004611
8. Coelho VR, Cooper RA, Rodrigues SA (2000) Burrow morphology and behavior of the mud shrimp Upogebia omissa (Decapoda: Thalassinidea: Upogebiidae). Mar Ecol Prog Ser 200:229-240
9. Dobbs FC, Guckert JB (1988) Callianassa trilobata (Crustacea: Thalassinidea) influences abundance of meiofauna and biomass, composition, and physiologic state of microbial communities within its burrow. Mar Ecol Prog Ser 45:69-79
10. Dworschak PC (1981) The pumping rates of the burrowing shrimp Upogebia pusilla (Petagna) (Decapoda: Thalassinidea). J Exp Mar Biol Ecol 52:25-35. doi: 10.1016/0022-0981(81)90168-4
11. Dworschak PC (1983) The biology of Upogebia pusilla (Petagna) (Decapoda, Thalassinidea): I. The burrows. PSZNI Mar Ecol 4:19-43
12. Felder DL, Griffis RB (1994) Dominant infaunal communities at risk in shoreline habitats: burrowing thalassinid Crustacea. (OCS Study # MMS 94-0007). US Department of the Interior, Minerals Management Service, Gulf of Mexico OCS Regional Office. New Orleans, Louisiana, pp 87
13. Griffen BD, DeWitt TH, Langdon C (2004) Particle removal rates by the mud shrimp Upogebia pugettensis, its burrow, and a commensal clam: effects on estuarine phytoplankton abundance. Mar Ecol Prog Ser 269:223-236
14. Griffis RB, Suchanek TH (1991) A model of burrow architecture and trophic modes in thalassinidean shrimp (Decapoda: Thalassinidea). Mar Ecol Prog Ser 79:171-183
15. Kenner RA, Ahmed SI (1975) Measurements of electron transport activities in marine phytoplankton. Mar Biol 33:119-127. doi: 10.1007/BF00390716
16. Kinoshita K (2002) Burrow structure of the mud shrimp Upogebia major (Decapoda: Thalassinidea: Upogebiidae). J Crust Biol 22:474-480
17. Kinoshita K, Itani G (2005) Interspecific differences in the burrow morphology between the sympatric mud shrimps, Austinogebia narutensis and Upogebia issaeffi (Crustacea: Thalassinidea: Upogebiidae). J Mar Biol Ass UK 85:943-947. doi: 10.1017/S0025315405011902
18. Kinoshita K, Wada M, Kogure K, Furota T (2003a) Mud shrimp burrows as dynamic traps and processors of tidal-flat materials. Mar Ecol Prog Ser 247:159-164
19. Kinoshita K, Nakayama S, Furota T (2003b) Life cycle characteristics of the deep-burrowing mud shrimp Upogebia major (Thalassinidea: Upogebiidae) on a tidal flat along the northern coast of Tokyo Bay. J Crust Biol 23:318-327
20. Koike I, Mukai H (1983) Oxygen and inorganic nitrogen contents and fluxes in burrows of the shrimps Callianassa japonica and Upogebia major. Mar Ecol Prog Ser 12:185-190
21. Kristensen E, Jensen MH, Aller RC (1991) Direct measurement of dissolved inorganic nitrogen exchange and denitrification in individual polychaete (Nereis virens) burrows. J Mar Res 49:355-377
22. Meysman FJR, Middelburga JJ, Heip CHR (2006) Bioturbation: a fresh look at Darwin's last idea. Trends Ecol Evol 21:688-695
23. Middelburg JJ, Klaver G, Nieuwenhuize J, Wielemaker A, de Haas W, Vlug T, van der Nat JFWA (1996) Organic matter mineralization in intertidal sediments along an estuarine gradient. Mar Ecol Prog Ser 132:157-168
24. Nickell LA, Atkinson RJA (1995) Functional morphology of burrows and trophic modes of three thalassinidean shrimp species, and a new approach to the classification of thalassinidean burrow morphology. Mar Ecol Prog Ser 128:181-197
25. Packard TT (1985) Measurement of electron transport activity of microplankton. In: Jannasch HW, Williams PJL (eds) Advances in aquatic microbiology, vol 3. Academic, London, pp 207-261
26. Papaspyrou S, Gregersen T, Cox R, Thessalou-Legaki M, Kristensen E (2005) Sediment properties and bacterial community in burrows of the ghost shrimp Pestarella tyrrhena (decapoda: Thalassinidea). Aquat Microb Ecol 38:181-190
27. Papaspyrou S, Gregersen T, Kristensen E, Christensen B, Cox RP (2006) Microbial reaction rates and bacterial communities in sediment surrounding burrows of two nereidid polychaetes (Nereis diversicolor and N. virens). Mar Biol 148:541-550. doi: 10.1007/s00227-005-0105-3
28. Porra RJ, Thompson WA, Kriedemann PE (1989) Determination of accurate extinction coefficients and simultaneous equations for assaying chlorophylls a and b extracted with four different solvents: verification of the concentration of chlorophyll standards by atomic absorption spectroscopy. Biochim Biophys Acta 975:384-394
29. Posey MH, Dumbauld BR, Armstrong DA (1991) Effects of a burrowing mud shrimp, Upogebia pugettensis (Dana), on abundances of macro-Infauna. J Exp Mar Biol Ecol 148:283-294. doi: 10.1016/0022-0981(91)90088-E
30. Vaugelas Jd, Buscail R (1990) Organic matter distribution in burrow of the thalassinia crustacean Callichirus laurae, Gulf of Aqaba (Red Sea). Hydrobiologia 207:269-277. doi: 10.1007/BF00041465
31. Vogel S, Bretz WL (1971) Interfical organisms: passive ventilation in the velocity gradients near surfaces. Science 175:210-211. doi: 10.1126/science.175.4018.210
32. Westrich JT, Berner RA (1984) The role of sedimentary organic matter in bacterial sulfate reduction: the G-model tested. Limnol Oceanogr 29:236-249