16 Y chromosomal STR haplotypes in Japanese

Forensic Science International

Volumn 174, Issue 1, 2008, Pages 71-76

  Mizuno, Natsuko ^a   Nakahara, Hiroaki ^a   Sekiguchi, Kazumasa ^a   Yoshida, Kanako ^a   Nakano, Minoru ^b   Kasai, Kentaro ^a  

^a NATIONAL RESEARCH INSTITUTE OF POLICE SCIENCE   (Japan)

^b CHIBA UNIVERSITY   (Japan)

Author keywords

DNA; Japanese; Population; STR; Y chromosome

Indexed keywords

16 Y CHROMOSOMAL SHORT TANDEM REPEAT; ARTICLE; CHROMOSOME ANALYSIS; CHROMOSOME MARKER; CONTROLLED STUDY; DNA EXTRACTION; DNA FINGERPRINTING; ELECTROPHORESIS; FEMALE; GENE AMPLIFICATION; GENE FREQUENCY; GENETIC MARKER; GENETIC VARIABILITY; HAPLOTYPE; HUMAN; INDIVIDUALITY; MALE; NORMAL HUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SEQUENCE ANALYSIS; SHORT TANDEM REPEAT;

EID: 36749054119     PISSN: 03790738     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.forsciint.2007.01.032     Document Type: Article

References (25)

1. Mulero J.J., Chang C.W., Calandro L.M., Green R.L., Li Y., Johnson C.L., and Hennessy L.K. Development and validation of the AmpFlSTR Yfiler PCR amplification kit: a male specific, single amplification 17 Y-STR multiplex system. J. Forensic Sci. 51 (2006) 64-75
2. Nei M. Molecular Evolutionary Genetics (1987), Columbia University Press, New York pp. 176-179
3. Excoffier L., Laval G., and Schneider S. Arlequin Ver. 3.0: An integrated software package for population genetics data analysis. Evol. Bioinform. Online 1 (2005) 47-50
4. Slatkin M. A measure of population subdivision based on microsatellite allele frequencies. Genetics 139 (1995) 457-462
5. Gusmao L., Butler J.M., Carracedo A., Gill P., Kayser M., Mayr W.R., Morling N., Prinz M., Roewer L., Tyler-Smith C., and Schneider P.M. DNA Commission of the International Society of Forensic Genetics (ISFG): an update of the recommendations on the use of Y-STRs in forensic analysis. Int. J. Legal Med. 120 (2006) 191-200
6. Kittler R., Erler A., Brauer S., Stoneking M., and Kayser M. Apparent intrachromosomal exchange on the human Y chromosome explained by population history. Eur. J. Hum. Genet. 11 (2003) 304-314
7. Ago K., Yuasa I., Umetsu K., Ago M., and Ogata M. Y-chromosomal STR haplotyping in a Japanese population. Leg. Med. (Tokyo) 2 (2000) 163-165
8. Mizuno N., Calafell F., Lu R., Kasai K., and Sato H. Y-specific polymorphisms in the Japanese and Taiwanese populations. Jpn. J. Sci. Tech. Iden. 5 (2000) 61-65
9. Koyama H., Iwasa M., Maeno Y., Tsuchimochi T., Isobe I., Yoshimi S.N., Jun M.O., Matsumoto T., Horii T., and Nagao M. Y-chromosomal STR haplotype in the Japanese population. Forensic Sci. Int. 124 (2001) 221-223
10. Uchihi R., Yamamoto T., Usuda K., Yoshimoto T., Tanaka M., Tokunaga S., Kurihara R., Tokunaga K., and Katsumata Y. Haplotype analysis with 14 Y-STR loci using two multiplex amplification and typing systems in two regional populations in Japan. Int. J. Legal Med. 117 (2003) 34-38
11. Yoshida Y., Kubo S., and Fujita Y. Population study of Y-chromosome STR haplotypes in Japanese from the Tokushima. Int. J. Legal Med. 119 (2005) 172-176
12. Hashiyada M., Nagashima T., Itakura Y., Sakai J., Kanawaku Y., Kanetake J., Nata M., and Funayama M. 12 Y-chromosomal STR haplotypes in Japanese. Forensic Sci. Int. 158 (2006) 204-212
13. Sinha S.K., Budowle B., Arcot S.S., Richey S.L., Chakrabor R., Jones M.D., Wojtkiewicz P.W., Schoenbauer D.A., Gross A.M., Sinha S.K., and Shewale J.G. Development and validation of a multiplexed Y-chromosome STR genotyping system, Y-PLEX 6, for forensic casework. J. Forensic Sci. 48 (2003) 93-103
14. Krenke B.E., Viculis L., Richard M.L., Prinz M., Milne S.C., Ladd C., Gross A.M., Gornall T., Frappier J.R., Eisenberg A.J., Barna C., Aranda X.G., Adamowicz M.S., and Budowle B. Validation of male-specific, 12-locus fluorescent short tandem repeat (STR) multiplex. Forensic Sci. Int. 151 (2005) 111-124
15. Butler J.M., Schoske R., Vallone P.M., Kline M.C., Redd A.J., and Hammer M.F. A novel multiplex for simultaneous amplification of 20 Y chromosome STR markers. Forensic Sci. Int. 129 (2002) 10-24
16. Butler J.M., Shen Y., and McCord B.R. The development of reduced size STR amplicons as tools for analysis of degraded DNA. J. Forensic Sci. 48 (2003) 1054-1064
17. Mizuno N., Senju H., Sekiguchi K., Yoshida K., Kasai K., and Sato H. A standard of AmpliType PM typing from aged evidentiary samples. J. Forensic Sci. 46 (2001) 677-680
18. Chang Y.M., Perumal R., Keat P.Y., and Kuehn D.L. Haplotype diversity of 16 Y-chromosomal STRs in three main ethnic populations (Malays, Chinese and Indians) in Malaysia. Forensic Sci. Int. (2006) 10.1016/j.forsciint.2006.1001.1002
19. Li K.L., Kai L., and Yuming M. Y chromosome STR haplotypes of Tibetan Living Tibet Lassa. Forensic Sci. Int. (2006) 10.1016/j.forsciint.2006.1008.1010
20. Zhang Q., Yan J., Tang H., Jiao Z., and Liu Y. Genetic polymorphisms of 17 Y-STRs haplotypes in Tibetan ethnic minority group of China. Leg. Med. (Tokyo) (2006) 10.1016/j.legalmed.2006.1007.1001
21. Lessig R., Willuweit S., Krawczak M., Wu F.C., Pu C.E., Kim W., Henke L., Henke J., Miranda J., Hidding M., Benecke M., Schmitt C., Magno M., Calacal G., Delfin F.C., de Ungria M.C., Elias S., Augustin C., Tun Z., Honda K., Kayser M., Gusmao L., Amorim A., Alves C., Hou Y., Keyser C., Ludes B., Klintschar M., Immel U.D., Reichenpfader B., Zaharova B., and Roewer L. Asian online Y-STR Haplotype Reference Database. Leg. Med. (Tokyo) 5 Suppl. 1 (2003) S160-S163
22. Roewer L., Krawczak M., Willuweit S., Nagy M., Alves C., Amorim A., Anslinger K., Augustin C., Betz A., Bosch E., Caglia A., Carracedo A., Corach D., Dekairelle A.F., Dobosz T., Dupuy B.M., Furedi S., Gehrig C., Gusmao L., Henke J., Henke L., Hidding M., Hohoff C., Hoste B., Jobling M.A., Kargel H.J., de Knijff P., Lessig R., Liebeherr E., Lorente M., Martinez-Jarreta B., Nievas P., Nowak M., Parson W., Pascali V.L., Penacino G., Ploski R., Rolf B., Sala A., Schmidt U., Schmitt C., Schneider P.M., Szibor R., Teifel-Greding J., and Kayser M. Online reference database of European Y-chromosomal short tandem repeat (STR) haplotypes. Forensic Sci. Int. 118 (2001) 106-113
23. Park M.J., Lee H.Y., Yoo J.E., Chung U., Lee S.Y., and Shin K.J. Forensic evaluation and haplotypes of 19 Y-chromosomal STR loci in Koreans. Forensic Sci. Int. 152 (2005) 133-147
24. Hammer M.F., Karafet T.M., Park H., Omoto K., Harihara S., Stoneking M., and Horai S. Dual origins of the Japanese: common ground for hunter-gatherer and farmer Y chromosomes. J. Hum. Genet. 51 (2006) 47-58
25. Lincoln P., and Carracedo A. Publication of population data of human polymorphisms. Forensic Sci. Int. 110 (2000) 3-5