Conformation and interaction of a D,L-alternating peptide with a bilayer membrane: X-ray reflectivity, CD, and FTIR spectroscopy

ChemPhysChem

Volumn 8, Issue 16, 2007, Pages 2336-2343

  Küsel, Andrea ^a   Khattari, Ziad ^a   Schneggenburger, Philipp E ^a   Banerjee, Arnab ^a   Salditt, Tim ^a,b   Diederichsen, Ulf ^a,b  

^a UNIVERSITY OF GÖTTINGEN   (Germany)

^b HASHEMITE UNIVERSITY   (Jordan)

Author keywords

Bilayers; Helical structures; Lipids; Membranes; Peptides

Indexed keywords

DICHROISM; IODINE; LIPIDS; MEMBRANES; PEPTIDES; REFLECTION; SPECTROSCOPIC ANALYSIS; X RAYS;

BI-LAYER; CONFORMATIONAL STATE; FOURIER TRANSFORM INFRARED; HELICAL STRUCTURES; SECONDARY STRUCTURES; SPECTROSCOPIC STUDIES; SYNTHETIC ANALOGUES; X-RAY REFLECTIVITY MEASUREMENTS;

FOURIER TRANSFORM INFRARED SPECTROSCOPY;

EID: 36549063893     PISSN: 14394235     EISSN: 14397641     Source Type: Journal    
DOI: 10.1002/cphc.200700477     Document Type: Article

References (55)

1. E. Alexopoulos, A. Küsel, G. M. Sheldrick, U. Diederichsen, I. Usón, Acta Crystallogr. 2004, D60, 1971-1980.
2. B. Di Blasio, E. Benedetti, V. Pavone, C. Pedone, C. Gerber, G. P. Lorenzi, Biopolymers 1989, 28, 203-214.
3. B. Di Blasio, E. Benedetti, V. Pavone, C. Pedone, O. Spiniello, G. P. Lorenzi, Biopolymers 1989, 28, 193-201.
4. E. Navarro, E. Fenude, B. Celda, Biopolymers 2004, 73, 229-241.
5. a) U. Diederichsen, Angew. Chem. 1997, 109, 1966-1969;
6. Angew. Chem. Int. Ed. 1997, 36, 1886-1889;
7. b) U. Diederichsen, D. Weicherding, N. J. Diezemann, Org. Biomol. Chem. 2005, 3, 1058-1066.
8. a) H. S. Kim, J. D. Hartgerink, M. R. Ghadiri, J. Am. Chem. Soc. 1998, 120, 4417-4424;
9. b) M. R. Ghadiri, J. R. Granja, L. K. Buehler, Nature 1994, 369, 301-304.
10. D. A. Doyle, B. A. Wallace, Biophys. J. 1998, 75, 635-640.
11. B. M. Burkhart, N. Li, D. A. Langs, W. A. Pangborn, W. L. Duax, Proc. Natl. Acad. Sci. USA 1998, 95, 12 950-12 955.
12. F. Lipmann, R. D. Hotchkiss, R. J. Dubos, J. Biol. Chem. 1941, 141, 163-169.
13. R. Sarges, B. Witkop, J. Am. Chem. Soc. 1965, 87, 2011-2020.
14. D. W. Urry, Proc. Natl. Acad. Sci. USA 1971, 68, 672-676.
15. W. R. Veatch, E. T. Fossel, E. R. Blout, Biochemistry 1974, 13, 5249-5256.
16. N. Mobashery, C. Nielsen, O. S. Andersen, FEBS Lett. 1997, 412, 15-20.
17. D. V. Greathouse, J. F. Hinton, K. S. Kim, R. E. Koeppe II, Biochemistry 1994, 33, 4291-4299.
18. W.-P. Ulrich, H. Vogel, Biophys. J. 1999, 76, 1639-1647.
19. M. Zein, R. Winter, Phys. Chem. Chem. Phys. 2000, 2, 4545-4551.
20. B. A. Wallace, W. R. Veatch, E. R. Blout, Biochemistry 1981, 20, 5754-5760.
21. Y. Chen, B. A. Wallace, Eur. Biophys. J. 1997, 26, 299-306.
22. D. A. Langs, Biopolymers 1989, 28, 259-266.
23. G. V. Miloshevsky, P. C. Jordan, Biophys. J. 2004, 86, 92-104.
24. H. D. Arndt, D. Bockelmann, A. Knoll, S. Lamberth, C. Griesinger, U. Koert, Angew. Chem. 2002, 114, 4234-4238;
25. Angew. Chem. Int. Ed. 2002, 41, 4062-4065.
26. J. M. Sanderson, Org. Biomol. Chem. 2005, 3, 201-212.
27. A. G. Lee, Biochim. Biophys. Acta 2003, 1612, 1-40.
28. T. Salditt, Curr. Opin. Struct. Biol. 2003, 13, 467-478.
29. C. Li, D. Constantin, T. Salditt, J. Phys. Condens. Matter 2004, 16, S2439-S2453.
30. E. Arbely, Z. Khattari, G. Brotons, M. Akkawi, T. Salditt, I. T. Arkin, J. Mol. Biol. 2004, 341, 769-779.
31. Z. Khattari, G. Brotons, E. Arbely, I. T. Arkin, T. H. Metzger, T. Salditt, Physi ca B 2005, 357, 34-38.
32. Z. Khattari, G. Brotons, M. Akkawi, E. Arbely, I. T. Arkin, T. Salditt, Biophys. J. 2006, 90, 2038-2050.
33. Z. Khattari, I. T. Arkin, T. Salditt, Eur. Biophys. J. 2006, 36, 45-55.
34. E. Navarro, E. Fenude, B. Celda, Biopolymers 2002, 64, 198-209.
35. a) M. R. R. de Planque, B. B. Bonev, J. A. A. Demmers, D. V. Greathouse, R. E. Koeppe II, F. Separovic, A. Watts, J. A. Killian, Biochemistry 2003, 42, 5341-5348;
36. b) J. A. Killian, I. Salemink, M. R. R. de Planque, G. Lindblom, R. E. Koeppe II, D. V. Greathouse, Biochemistry 1996, 35, 1037-1045.
37. a) E. Strandberg, S. Morein, D. T. S. Rijkers, R. M. J. Liskamp, P. C. A. van der Wel, J. A. Killian, Biochemistry 2002, 41, 7190-7198;
38. b) M. R. R. de Planque, J.-W. P. Boots, D. T. S. Rijkers, R. M. J. Liskamp, D. V. Greathouse, J. A. Killian, Biochemistry 2002, 41, 8396-8404.
39. a) T. A. Harroun, W. T. Heller, T. M. Weiss, L. Yang, H. W. Huang, Biophys. J. 1999, 76, 937-945;
40. b) T. A. Harroun, W. T. Heller, T. M. Weiss, L. Yang, H. W. Huang, Biophys. J. 1999, 76, 3176-3185.
41. B. A. Wallace, J. Struct. Biol. 1998, 121, 123-141.
42. S. V. Sychev, N. A. Nevskaya, St. Jordanov, E. N. Shepel, A. I. Miroshnikov, V. T. Ivanov, Bioorg. Chem. 1980, 9, 121-151.
43. a) V. M. Naik, S. Krimm, Biophys. J. 1986, 49, 1131-1145;
44. b) V. M. Naik, S. Krimm, Biophys. J. 1986, 49, 1147-1154.
45. E. Nabedryk, M. P. Gingold, J. Breton, Biophys. J. 1982, 38, 243-249.
46. Z. Kóta, T Páli, D. Marsh, Biophys. J. 2004, 86, 1521-1531.
47. T. M. Weiss, P. C. A. van der Wel, J. A. Killian, R. E. Koeppe II, H. W. Huang, Biophys. J. 2003, 84, 379-385.
48. W. C. Chan, P. D. White, Fmoc Solid-Phase Synthesis: A Practical Approach, Oxford University Press, New York, 2001.
49. M. Seul, M. J. Sammon, Thin Solid Films 1990, 185, 287-305.
50. T. Salditt, C. Munster, J. Lu, M. Vogel, W. Fenzl, A. Souvorov, Phys. Rev. E 1999, 60, 7285-7289.
51. J. L. Rigaud, M. T. Paternostre, A. Bluzat, Biochemistry 1988, 27, 2677-2688.
52. a) C. Münster, J. Lu, S. Schinzel, B. Bechinger, T. Salditt, Eur. Biophys. J. 2000, 28, 683-688;
53. b) A. Spaar, C. Münster, T. Salditt, Biophys. J. 2004, 87, 396-407.
54. a) C. R. Cantor, P. R. Schimmel, Biophysical Chemistry, Part II: Techniques for the Study of Biological Structure and Function, Freeman, New York, 1980;
55. b) Y. Wu, K. He, S. J. Ludtke, H. W. Huang, Biophys. J. 1995, 68, 2361-2369.