Quantitative evaluation of sensitivity and selectivity of multiplex nanoSPR biosensor assays

Biophysical Journal

Volumn 93, Issue 10, 2007, Pages 3684-3692

  Yu, Chenxu ^a   Irudayaraj, Joseph ^a  

^a PURDUE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

IMMUNOGLOBULIN ANTIBODY; NANOROD;

ARTICLE; BINDING AFFINITY; BIOSENSOR; MOLECULAR PROBE; QUANTITATIVE ANALYSIS;

CAPRA HIRCUS; ORYCTOLAGUS CUNICULUS;

EID: 36549048515     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1529/biophysj.107.110064     Document Type: Article

References (50)

1. Turner, A. P. F. 2000. Biosensors: sense and sensitivity. Science. 290:1315-1317.
2. Klotz, I. M. 1997. Ligand Receptor Energetics: A Guide for the Perplexed. Wiley, New York.
3. Lee, H. J., T. T. Goodrich, and R. M. Corn. 2001. SPR imaging measurements of 1-D and 2-D DNA microarrays created from micro-fluidic channels on gold thin films. Anal. Chem. 73:5525-5531.
4. Hall, D. 2001. Use of optical biosensors for the study of mechanistically concerted surface adsorption processes. Anal. Biochem. 288:109-125.
5. Wang, J., X. Cai, G. Rivas, H. Shiraishi, P. A. M. Farias, and N. Dontha. 1996. DNA electrochemical biosensor for the detection of short DNA sequences related to the Human Immunodeficiency Virus. Anal. Chem. 68:2629-2634.
6. Walterbeek, H. T., and A. J. G. M. van der Meer. 1996. A sensitive and quantitative biosensing method for the determination of γ-ray emitting radionuclides in surface water. J. Environ. Radioact. 33:237-254.
7. Thevenot, D. R., K. Toth, R. A. Durst, and G. S. Wilson. 2001. Electrochemical biosensors: recommended definitions and classification. Biosens. Bioelectron. 16:121-131.
8. Mascini, M., I. Palchetti, and G. Marrazza. 2000. DNA electrochemical biosensors. Fresenius J. Anal. Chem. 369:15-22.
9. Horacek, J., and P. Skladal. 1997. Improved direct piezoelectric biosensors operating in liquid solution for the competitive label-free immunoassay of 2,4-dichlorophenoxyacetic acid. Anal. Chim. Acta. 347:43-50.
10. Ebersole, R. C., J. A. Miller, J. R. Moran, and M. D. Ward. 1990. Spontaneously formed functionally active avidin monolayers on metal surfaces: a strategy for immobilizing biological reagents and design of piezoelectric biosensors. J. Am. Chem. Soc. 112:3239-3241.
11. Miller, M. M., P. E. Sheehan, R. L. Edelstein, C. R. Tamanaha, L. Zhong, S. Bounnak, L. J. Whitman, and R. J. Colton. 2001. A DNA array sensor utilizing magnetic microbeads and magnetoelectronic detection. J. Magn. Magn. Mater. 225:138-144.
12. Chemla, Y. R., H. L. Grossman, Y. Poon, R. McDermott, R. Stevens, M. D. Alper, and J. Clarke. 2000. Ultrasensitive magnetic biosensor for homogeneous immunoassay. Proc. Natl. Acad. Sci. USA. 97:14268-14272.
13. Raiteri, R., M. Grattarola, H.-J. Butt, and P. Skladal. 2001. Micromechanical cantilever-based biosensors. Sens. Actuators B. 79:115-126.
14. Kasemo, B. 1998. Biological surface science. Curr. Opin. Solid State Mater. Sci. 3:451-459.
15. Yu, C., A. Ganjoo, H. Jain, C. J. Pantano, and J. Irudayaraj. 2006. Mid-IR biosensor: detection and fingerprinting of pathogens on gold island functionalized chalcogenide films. Anal. Chem. 78:2500-2506.
16. Cao, Y. C., R. Jin, and C. A. Mirkin. 2002. Nanoparticles with Raman spectroscopic fingerprints for DNA and RNA detection. Science. 297:1536-1540.
17. Natsume, T., H. Nakayama, and T. Isobe. 2001. BIA-MS-MS: biomolecular interaction analysis for functional proteomics. Trends Biotechnol. 19:S28-S33.
18. Polla, D. L., A. G. Erdman, W. P. Robbins, D. T. Markus, J. Diaz-Diaz, R. Rizq, Y. Nam, H. T. Brickner, A. Wang, and P. Krulevitch. 2000. Microdevices in medicine. Annu. Rev. Biomed. Eng. 2:551-576.
19. Schuck, P. 1997. Use of surface plasmon resonance to probe the equilibrium and dynamic aspects of interactions between biological macromolecules. Annu. Rev. Biophys. Biomol. Struct. 26:541-566.
20. Nath, N., and A. Chilkoti. 2004. Label free colorimetric biosensing using nanoparticles. J. Fluor. 14:377-389.
21. Haes, A., and R. P. van Duyne. 2002. A nanoscale optical biosensor: sensitivity and selectivity of an approach based on the localized surface plasmon resonance spectroscopy of triangular silver nanoparticles. J. Am. Chem. Soc. 124:10596-10604.
22. Nath, N., and A. Chilkoti. 2002. A colorimetric gold nanoparticle sensor to interrogate biomolecular interactions in real time on a surface. Anal. Chem. 74:504-509.
23. Yonzon, C. R., E. Jeoung, S. Zou, G. C. Schatz, M. Mrksich, and R. P. Van Duyne. 2004. A comparative analysis of localized and propagating surface plasmon resonance sensors: the binding of concanavalin A to a monosaccharide functionalized self-assembled monolayer. J. Am. Chem. Soc. 126:12669-12676.
24. Ghosh, S. K., S. Nath, S. Kundu, K. Esumi, and T. Pal. 2004. Solvent and ligand effects on the localized surface plasmon resonance (LSPR) of gold colloids. J. Phys. Chem. B. 108:13963-13971.
25. Dahlin, A., M. Zach, T. Rindzevicius, M. Kall, D. S. Sutherland, and F. Hook. 2005. Localized surface plasmon resonance sensing of lipid-membrane- mediated biorecognition events. J. Am. Chem. Soc. 127:5043-5048.
26. Raschke, G., S. Kowarik, T. Franzl, C. Sonnichsen, T. A. Klar, J. Feldmann, A. Nichtl, and K. Kurzinger. 2003. Biomolecular recognition based on single gold nanoparticle light scattering. Nano Lett. 3:935-938.
27. Raschke, G., S. Brogl, A. S. Susha, A. L. Rogach, T. A. Klar, J. Feldmann, B. Fieres, N. Petkov, T. Bein, A. Nichtl, and K. Kurzinger. 2004. Gold nanoshells improve single nanoparticle molecular sensors. Nano Lett. 4:1853-1857.
28. Lee, S., and H. Perez-Luna. 2005. Dextran-gold nanoparticle hybrid material for biomolecule immobilization and detection. Anal. Chem. 77:7204-7211.
29. Yu, C., and J. Irudayaraj. 2007. Multiplex biosensor using gold nanorods. Anal. Chem. 79:572-579.
30. Perez-Juste, J., I. Pastoriza-Santos, L. M. Liz-Marz'an, and P. Mulvaney. 2005. Gold nanorods: synthesis, characterization and applications. Coord. Chem. Rev. 249:1870-1901.
31. Millstone, J. E., S. Park, K. Shuford, L. Qin, G. C. Schatz, and C. A. Mirkin. 2005. Observation of a quadrupole plasmon mode for a colloidal solution of gold nanoprisms. J. Am. Chem. Soc. 127:5312-5313.
32. Takahashi, H., Y. Niidome, T. Niidone, K. Kaneko, H. Kawasaki, and S. Yamada. 2006. Modification of gold nanorods using phosphatidylcholine to reduce cytotoxicity. Langmuir. 22:2-5.
33. Pierrat, S., I. Zins, A. Breivogel, and C. Sonnichsen. 2007. Self-assembly of small gold colloids with functionalized gold nanorods. Nano Lett. 7:259-263.
34. Nikoobakht, B., and M. A. El-Sayed. 2003. Preparation and growth mechanism of gold nanorods (NRs) using seed-mediated growth method. Chem. Mater. 15:1957-1962.
35. Lee, K., and M. A. El-Sayed. 2005. Dependence of the enhanced optical scattering efficiency relative to that of absorption for gold metal nanorods on aspect ratio, size, end-cap shape, and medium refractive index. J. Phys. Chem. B. 109:20331-20338.
36. Chang, J., H. Wu, H. Chen, Y. Ling, and W. Tan. 2005. Oriented assembly of Au nanorods using biorecognition system. Chem. Commun. 8:1092-1094.
37. Caswell, K. K., J. N. Wilson, U. H. F. Bunz, and C. Murphy. 2003. Preferential end-to-end assembly of gold nanorods by biotin-streptavidin connectors. J. Am. Chem. Soc. 125:13914-13915.
38. Thomas, K. G., S. Barazzouk, B. I. Ipe, J. S. T. Shibu, and P. V. Kamat. 2004. Uniaxial plasmon coupling through longitudinal self-assembly of gold nanorods. J. Phys. Chem. B. 108:13066-13068.
39. Murphy, C. J., T. K. Sau, A. M. Gole, C. J. Orendorff, J. Gao, L. Gou, S. E. Hunyadi, and T. Li. 2005. Anisotropic metal nanoparticles: synthesis, assembly, and optical applications. J. Phys. Chem. B. 109:13857-13870.
40. Lee, K., and M. A. El-Sayed. 2006. Gold and silver nanoparticles in sensing and imaging: sensitivity of plasmon response to size, shape, and metal composition. J. Phys. Chem. B. 110:19220-19225.
41. Kekicheff, P., and O. Spalla. 1994. Refractive index of thin aqueous films confined between two hydrophobic surfaces. Langmuir. 10:1584-1591.
42. Kandimalla, V. B., N. S. Neeta, N. G. Karanth, M. S. Thakur, K. R. Roshini, B. E. Rani, A. Pasha, and N. G. Karanth. 2004. Regeneration of ethyl parathion antibodies for repeated use in immunosensor: a study on dissociation of antigens from antibodies. Biosens. Bioelectron. 20:903-906.
43. Jun, L. S., C. T. Campbell, T. M. Chinowsky, M. N. Mar, and S. S. Yee. 1998. Quantitative interpretation of the response of surface plasmon resonance sensors to adsorbed films. Langmuir. 14:5636-5648.
44. Jensen, T. R., K. L. Kelly, A. Lazarides, and J. C. Schatz. 1999. Electrodynamics of noble metal nanoparticles and nanoparticle clusters. J. Cluster Sci. 10:295-317.
45. Walczak, M. M., C. Chung, S. M. Stole, C. A. Widrig, and M. D. Porter. 1991. Structure and interfacial properties of spontaneously adsorbed n-alkanethiolate monolayers on evaporated silver surfaces. J. Am. Chem. Soc. 113:2370-2378.
46. Vörös, J. 2004. The density and refractive index of adsorbing protein layers. Biophys. J. 87:553-561.
47. Murphy, R. M., H. Slayter, P. Schurtenberger, R. A. Chamberlin, C. K. Colton, and M. L. Yarmush. 1988. Size and structure of antigen-antibody complexes. Electron microscopy and light scattering studies. Biophys. J. 54:45-56.
48. Chevrier, M. C., I. Chateauneuf, M. Guerin, and R. Lemjeux. 2004. Sensitive detection of human IgG in ELISA using a monoclonal anti-IgG-peroxidase conjugate. Hybrid. Hybridomics. 23:362-367.
49. 2 autoantibody. Proc. Natl. Acad. Sci. USA. 94:1902-1907.
50. Schwille, P., F. J. Meyer-Almes, and R. Rigler. 1997. Dual-color fluorescence cross-correlation spectroscopy for multicomponent diffusional analysis in solution. Biophys. J. 72:1878-1881.