The monomeric photosystem I-complex of the diatom Phaeodactylum tricornutum binds specific fucoxanthin chlorophyll proteins (FCPs) as light-harvesting complexes

Biochimica et Biophysica Acta - Bioenergetics

Volumn 1767, Issue 12, 2007, Pages 1428-1435

  Veith, Thomas ^a   Büchel, Claudia ^a  

^a GOETHE UNIVERSITY   (Germany)

Author keywords

Diadinoxanthin; Electron microscopy; Fluorescence; Membrane protein; Photosynthesis

Indexed keywords

ANTIBODY; CHLOROPHYLL; FUCOXANTHIN; FUCOXANTHIN CHLOROPHYLL PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; CONTROLLED STUDY; DIATOM; ELECTRON MICROSCOPY; ENERGY TRANSFER; GEL FILTRATION; LIGHT HARVESTING SYSTEM; NONHUMAN; NUCLEOTIDE SEQUENCE; PHOTOSYSTEM I; PRIORITY JOURNAL; PROTEIN FUNCTION; SPECTROSCOPY;

ALGAL PROTEINS; CELL FRACTIONATION; DIATOMS; LIGHT-HARVESTING PROTEIN COMPLEXES; PHOTOSYSTEM I PROTEIN COMPLEX; PROTEIN BINDING; XANTHOPHYLLS;

BACILLARIOPHYTA; CHLOROPHYTA; CYCLOTELLA CRYPTICA; PHAEODACTYLUM TRICORNUTUM;

EID: 36549005048     PISSN: 00052728     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbabio.2007.09.004     Document Type: Article

References (42)

1. Falciatore A., and Bowler C. Revealing the molecular secrets of marine diatoms. Annu. Rev. Plant Biol. 53 (2002) 109-130
2. Pyszniak A.M., and Gibbs S. Immunocytochemical localization of photosystem I and the fucoxanthin-chlorophyll a/c light-harvesting complex in the diatom Phaeodactylum tricornutum. Protoplasma 166 (1992) 208-217
3. Bhaya D., and Grossman A.R. Characterization of gene clusters encoding the fucoxanthin chlorophyll proteins of the diatom Phaeodactylum tricornutum. Nucleic Acids Res. 21 (1993) 4458-4466
4. Eppard M., and Rhiel E. The genes encoding light-harvesting subunits of Cyclotella cryptica (Bacillariophyceae) constitute a complex and heterogenous family. Mol. Gen. Genet. 260 (1998) 335-345
5. Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D., Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A., Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C., Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M., Jenkins B.D., Jurka J., Kapitonov V.V., Kröger N., Lau W.W.Y., Lane T.W., Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M., Schnitzler Parker M., Palenik B., Pazour G.J., Richardso P.M., Rynearson T.A., Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A., Wilkerson F.P., and Rokhsar D.S. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Science 306 (2004) 79-86
6. Büchel C. Fucoxanthin-chlorophyll proteins in diatoms: 18 and 19 kDa subunits assemble into different oligomeric states. Biochemistry 42 (2003) 13027-13034
7. Beer A., Gundermann K., Beckmann J., and Büchel C. Subunit composition and pigmentation of fucoxanthin-chlorophyll proteins in diatoms: evidence for a subunit involved in diadinoxanthin and diatoxanthin binding. Biochemistry 45 (2006) 13046-13053
8. Maheswari U., Montsant A., Goll J., Krishnasamy S., Rajyashri K.R., Patell V.M., and Bowler C. The diatom EST database. Nucleic Acids Res. 33 (2005) 344-347
9. Pancic P.G., Strotmann H., and Kowallik K.V. Chloroplast ATPase genes in the diatom Odontella sinensis reflect cyanobacterial characters in structure and arrangement. J. Mol. Biol. 224 (1991) 529-536
10. Owens T.G., and Wold E.R. Light-harvesting function in the diatom Phaeodactylum tricornutum. I. Isolation and characterization of pigment-protein complexes. Plant Physiol. 80 (1986) 732-738
11. Caron L., and Brown J. Chlorophyll-carotenoid protein complexes from the diatom, Phaeodactylum tricornutum: spectrophotometric, pigment and polypeptide analysis. Plant Cell Physiol. 28 (1987) 775-785
12. Boczar B.A., and Prezelin B. Organization and comparison of chlorophyll-protein complexes from two fucoxanthin-containing algae: Nitzschia closterium (Bacillariophyceae) and Isochrysis galbana (Prymnesiophyceae). Plant Cell Physiol. 30 (1989) 1047-1056
13. Berkaloff C., Caron L., and Rousseau B. Subunit organization of PSI particles from brown algae and diatoms: polypeptide and pigment analysis. Photosynth. Res. 23 (1990) 181-193
14. Brakemann T., Schlörmann W., Marquardt J., Nolte M., and Rhiel E. Association of fucoxanthin chlorophyll a/c-binding polypeptides with photosystems and phosphorylation in the centric diatom Cyclotella cryptica. Protist 157 (2006) 463-475
15. Lichtlé C., Duval J.C., and Lemoine J. Comparative biochemical, functional and ultrastructural studies of photosystem particles from a cryptophyceae, Cryptomonas rufescens; isolation of an active phycoerythrin particle. Biochim. Biophys. Acta 894 (1987) 76-90
16. Büchel C., and Wilhelm C. Isolation and characterization of a photosystem I-associated antenna (LHC I) and a photosystem I-core complex from the chlorophyll c-containing alga Pleurochloris meiringensis. J. Photochem. Photobiol. 20 (1993) 87-93
17. Ben-Shem A., Frolow F., and Nelson N. Crystal structure of plant photosystem I. Nature 426 (2003) 630-635
18. Amunts A., Drory O., and Nelson N. The structure of a plant photosystem I supercomplex at 3.4 Å resolution. Nature 447 (2007) 58-63
19. Boekema E.J., Hifney A., Yakushevska Ä., Piotrowlski M., Keegstra W., Berry S., Michel K.P., Pistorius E.K., and Kruip J. A giant chlorophyll-protein complex induced by iron deficiency in cyanobacteria. Nature 412 (2001) 745-748
20. Provasoli L., McLaughlin J.J.A., and Droop M.R. The development of artificial media for marine algae. Arch. Mikrobiol. 25 (1957) 392-428
21. Jeffrey S.W., and Humphrey G.F. New spectrometric equations for determining chlorophyll a, b, c1 and c2 in higher plants, algae and natural phytoplankton. Biochem. Physiol. Pflanzen 167 (1975) 191-194
22. Kühlbrandt W., Thaler T., and Wherli E. The structure of membrane crystals of the light-harvesting chlorophyll a/b protein complex. J. Cell Biol. 96 (1983) 1414-1424
23. Arnon D.I. Copper enzymes in isolated chloroplasts. Polyphenoloxidase In Beta Vulgaris. Plant Physiol. 24 (1949) 1-14
24. Rippka R., Deruelles J., Waterbury J.B., Herdman M., and Stanier R.Y. Generic assignments, strain histories, and properties of pure cultures of cyanobacteria. J. Gen. Microbiol. 111 (1979) 1-61
25. 6 From Plants, Green Algae, and Cyanobacteria. In: Carpentier R. (Ed). Photosynthesis Research Protocols. Methods in Mol. Biol. vol. 274 (2004) 79-92
26. Vavilin D.V. Isolation of Functional Photosystem II Core particles From the Cyanobacterium Synechocystis sp. PCC 6803. In: Carpentier R. (Ed). Photosynthesis Research Protocols. Methods in Mol. Biol. vol. 274 (2004) 37-47
27. Schägger H., and von Jagow G. Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Anal. Biochem. 166 (1987) 368-379
28. Schägger H., and von Jagow G. Blue native electrophoresis for isolation of membrane protein complexes in enzymatically active form. Anal. Biochem. 199 (1991) 223-231
29. Cline K., and Mori H. Thylakoid ΔpH-dependent precursor proteins bind to a cpTatC-Hcf106 complex before Tha4-dependent transport. J. Cell Biol. 154 (2001) 719-729
30. Papagiannakis E., van Stokkum I., Fey H., Büchel C., and van Grondelle R. Spectroscopic characterization of the excitation energy transfer in the fucoxanthin-chlorophyll protein of diatoms. Photosynth. Res. 86 (2005) 241-250
31. Hiyama T., and Ke B. Difference spectra and extinction coefficients of P700. Biochim. Biophys. Acta 267 (1972) 160-171
32. Amunts A., Ben-Shem A., and Nelson N. Solving the structure of plant photosystem I-biochemistry is vital. Photochem. Photobiol. Sci. 4 (2005) 1011-1015
33. Jordan P., Fromme P., Witt H.T., Klukas O., Saenger W., and Krauß N. Three-dimensional structure of cyanobacterial photosystem I at 2.5 Å resolution. Nature 411 (2001) 909-917
34. Guglielmi G., Lavaud J., Rousseau B., Etienne A.L., Houmard J., and Ruban A.V. The light-harvesting antenna of the diatom Phaeodactylum tricornutum. FEBS J. 272 (2005) 4339-4348
35. Kügler M., Jänsch L., Kruft V., Schmitz U.K., and Braun H.P. Analysis of the chloroplast protein complexes by blue-native polyacrylamide gel electrophoresis (BN-PAGE). Photosynth. Res. 53 (1997) 35-44
36. Danielsson R., Suorsa M., Paakkarinen V., Albertsson P.A., Styring S., Aro E.M., and Mamedov F. Dimeric and monomeric organization of photosystem II. J. Biol. Chem. 281 (2006) 14241-14249
37. Kargul J., Nieldt J., and Barber J. Three-dimensional reconstruction of a light-harvesting complex I-photosystem I (LHCI-PSI) supercomplex from the green alga Chlamydomonas reinhardtii. J. Biol. Chem. 278 (2003) 16135-16141
38. Germano M., Yakushevska A.E., Keegstra W., van Gorkom H.J., Dekker J.P., and Boekema E.J. Supramolecular organization of photosystem I and light-harvesting complex I in Chlamydomonas reinhardtii. FEBS Lett. 525 (2002) 121-125
39. Garczarek L., van der Staay G.W.M., Thomas J.C., and Partensky F. Isolation and characterization of Photosystem I from two strains of the marine oxychlorobacterium Prochlorococcus. Photosynth. Res. 56 (1998) 131-141
40. Jolley C., Ben-Shem A., Nelson N., and Fromme P. Structure of plant photosystem I revealed by theoretical modeling. J. Biol. Chem. 280 (2005) 33627-33636
41. Wilhelm C., Büchel C., Fisahn J., Gossa R., Jakob T., LaRoche J., Lavaud J., Lohr M., Riebesell U., Stehfest K., Valentin K., and Kroth P.G. The regulation of carbon and nutrient assimilation in diatoms is significantly different from green algae. Protist 157 (2006) 91-124
42. Melkozernov A.N., Barber J., and Blankenship R.E. Light harvesting in photosystem I supercomplexes. Biochemistry 45 (2006) 331-345