A comparison framework for breathing motion estimation methods from 4D imaging

IEEE Transactions on Medical Imaging

Volumn 26, Issue 12, 2007, Pages 1636-1648

  Sarrut, David ^a,b   Delhay, Bertrand ^b   Villard, Pierre Frédéric ^c,d,e   Boldea, Vlad ^a,c,d,e   Beuve, Michael ^c,d,e   Clarysse, Patrick ^b  

^a CENTRE LÉON BÉRARD   (France)

^b UNIVERSITÉ DE LYON   (France)

^c UNIVERSITÉ DE LYON   (France)

^d UNIVERSITÉ LYON 1   (France)

^e CNRS   (France)

Author keywords

Deformable registration; Radiotherapy; Thorax; Validation

Indexed keywords

IMAGE REGISTRATION; MOTION ESTIMATION; RADIOTHERAPY; STATISTICAL TESTS; TRACKING (POSITION);

DEFORMABLE REGISTRATION; MEDICAL EXPERTS; THERAPEUTIC IRRADIATION; THORAX; VALIDATION;

RESPIRATORY MECHANICS;

ALGORITHM; ARTICLE; ARTIFACT; AUTOMATED PATTERN RECOGNITION; BIOLOGICAL MODEL; COMPUTER ASSISTED RADIOTHERAPY; COMPUTER ASSISTED TOMOGRAPHY; EXHALATION; HUMAN; LUNG; METHODOLOGY; MOVEMENT (PHYSIOLOGY); PHYSIOLOGY; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY; THREE DIMENSIONAL IMAGING; TIME;

ALGORITHMS; ARTIFACTS; EXHALATION; HUMANS; IMAGING, THREE-DIMENSIONAL; LUNG; MODELS, BIOLOGICAL; MOVEMENT; PATTERN RECOGNITION, AUTOMATED; RADIOTHERAPY PLANNING, COMPUTER-ASSISTED; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; TIME FACTORS; TOMOGRAPHY, X-RAY COMPUTED;

EID: 36549001640     PISSN: 02780062     EISSN: None     Source Type: Journal    
DOI: 10.1109/TMI.2007.901006     Document Type: Article

References (54)

1. M. Goitein, "Organ and tumor motion: An overview," Seminars in Radiation Oncology, vol. 14, no. 1, pp. 2-9, Jan. 2004.
2. C. Ling, E. Yorke, H. Amols, J. Mechalakos, Y. Erdi, S. Leibel, K. Rosenzweig, and A. Jackson, "Editorial. : high-tech will improve radiotherapy of NSCLC: a hypothesis waiting to be validated," International Journal of Radiation Oncology Biology Physics, vol. 60, no. 1, pp. 3-7, 2004.
3. G. Mageras and E. Yorke, "Deep inspiration breath hold and respiratory gating strategies for reducing organ motion in radiation treatment," Seminars in Radiation Oncology, vol. 14, no. 1, pp. 65-75, Jan. 2004.
4. S. Vedam, P. Keall, V. Kini, H. Mostafavi, H. Shukla, and R. Mohan, "Acquiring a four-dimensional computed tomography dataset using an external respiratory signal," Physics in Medecine and Biology, vol. 48, no. 1, pp. 45-62, 2003.
5. P. Keall, S. Joshi, S. Vedam, J. Siebers, V. Kini, and R. Mohan, "Four-dimensional radiotherapy planning for DMLC-based respiratory motion tracking," Medical physics, vol. 32, no. 4, pp. 942-951, 2005.
6. T. Zhang, R. Jeraj, H. Keller, W. Lu, O. GH., M. TR., T. Mackie, and P. B., "Treatment plan optimization incorporating respiratory motion," Medical physics, vol. 31, no. 6, pp. 1576-86, June 2004.
7. E. Rietzel, G. Chen, N. Choi, and C. Willet, "Four-dimensional imagebased treatment planning: Target volume segmentation and dose calculation in the presence of respiratory motion," International Journal of Radiation Oncology Biology Physics, vol. 61, no. 5, pp. 1535-50, Apr. 2005.
8. K. Brock, M. DL., T. H. RK., H. SJ., L. Dawson, and J. Balter, "Inclusion of organ deformation in dose calculations," Medical physics, vol. 30, no. 3, pp. 290-5, Mar. 2003.
9. J. West, J. Fitzpatrick, M. Wang, B. Dawant, C. Maurer, R. Kessler, R. Maciunas, C. Barillot, D. Lemoine, A. Collignon, F. Maes, P. Suetens, D. Vandermeulen, P. Elsen, S. Napel, T. Sumanaweera, B. Harkness, P. Hemler, D. Hill, D. Hawkes, C. Studholme, J. Maintz, M. Viergever, G. Malandain, X. Pennec, M. Noz, G. Maguire, M. Pollack, C. Pelizzari, R. Robb, D. Hanson, and R. Woods, "Comparison and Evaluation of Retrospective Intermodality Image Registration Techniques," Journal of Computed Assisted Tomograpy, vol. 21, no. 4, pp. 554-566, 1997.
10. J. Fitzpatrick and J. West, "The distribution of target registration error in rigid-body point-based registration," IEEE Trans. Med. Imag., vol. 20, no. 9, pp. 917-927, Sept. 2001.
11. N. Pauna, P. Croisille, N. Costes, A. Reilhac, T. Makela, O. Cozar, M. Janier, and P. Clarysse, "A strategy to quantitatively evaluate MRI/PET cardiac rigid registration methods using a Monte Carlo simulator," in Springer LNCS 2674, Proceedings of FIMH'03 (Second International Workshop on functional Imaging and Modeling of the Heart), Lyon France, 2003, pp. 194-204.
12. P. Hellier, C. Barillot, I. Corouge, B. Gibaud, G. L. Goualher, D. L. Collins, A. Evans, G. Malandain, N. Ayache, G. E. Christensen, and H. J. Johnson, "Retrospective evaluation of intersubject brain registration," IEEE Trans. Med. Imag., vol. 22, no. 9, pp. 1120-1130, Sept. 2003.
13. T. Pan, T. Lee, E. Rietzel, and G. Chen, "4D-CT imaging of a volume influenced by respiratory motion on multi-slice CT," Medical physics, vol. 31, no. 2, pp. 333-340, 2004.
14. D. Sarrut, V. Boldea, M. Ayadi, J. Badel, C. Ginestet, and S. Clippe, "Non-rigid registration method to assess reproducibility of breath-holding with ABC in lung cancer," International Journal of Radiation Oncology Biology Physics, vol. 61, no. 2, pp. 594-607, 2005.
15. J. W. Tukey, "Box-and-Whisker Plots," Exploratory Data Analysis, pp. 39-43, 1977.
16. J. Bland and D. Altman, "Statistical methods for assessing agreement between two methods of clinical measurement," Lancet, vol. 1, pp. 307-310, 1986.
17. A. Lujan, L. EW, J. Balter, and R. Ten Haken, "A method for incorporating organ motion due to breathing into 3D dose calculations," Medical physics, vol. 26, no. 5, pp. 715-20, 1999.
18. R. George, S. Vedam, T. Chung, V. Ramakrishnan, and P. J. Keall, "The application of the sinusoidal model to lung cancer patient respiratory motion," Medical physics, vol. 32, no. 9, pp. 2850-2861, Sept. 2005.
19. W. Crum, T. Hartkens, and D. Hill, "Non-rigid image registration: theory and practice," Br J Radiol., vol. 77, no. 2, pp. 140-153, 2004.
20. B. Zitova and J. Flusser, "Image registration methods: a survey," Image and Vision Computing, vol. 21, pp. 977-1000, 2003.
21. C. Maurer and J. Fitzpatrick, "A review of medical image registration," In Interactive ImageGuided Neurosurgery, R. J. Maciunas, Ed. American Association of Neurological Surgeons, Park Ridge, IL, pp. 17-44, 1993.
22. L. Fan, C. Chen, J. Reinhardt, and E. Hoffman, "Evaluation and application of 3D lung warping and registration model using HRCT images," in SPIE Medical Imaging, vol. 4321, San Diego, CA, 2001, pp. 234-243.
23. B. Li, G. Christensen, E. Hoffman, G. McLennan, and J. Reinhardt, "Establishing a normative atlas of the human lung: intersubject warping and registration of volumetric CT images," Acad. Radiol., vol. 10, no. 3, pp. 255-265, 2003.
24. D. Yan, D. Jaffray, and J. Wong, "A model to accumulate fractionated dose in a deforming organ," International Journal of Radiation Oncology Biology Physics, vol. 44, no. 3, pp. 665-75, June 1999.
25. B. Schaly, J. Kempe, G. Bauman, J. Battista, and J. Van Dyk, "Tracking the dose distribution in radiation therapy by accounting for variable anatomy," Physics in Medecine and Biology, vol. 49, no. 5, pp. 791-805, Mar. 2004.
26. W Lu, M. Chen, G. Olivera, K. Ruchala, and T. Mackie, "Fast free-form deformable registration via calculus of variations," Physics in Medecine and Biology, vol. 49, no. 14, pp. 3067-3087, 2004.
27. T. Sundaram and J. Gee, "Towards a model of lung biomechanics: pulmonary kinematics via registration of serial lung images," Medical Image Analysis, vol. 9, no. 6, pp. 254-37, Dec. 2005.
28. M. Birkner, D. Yan, M. Alber, J. Liang, and F. Nusslin, "Adapting inverse planning to patient and organ geometrical variation: algorithm and implementation." Medical physics, vol. 30, no. 10, pp. 2822-31, Oct. 2003.
29. J. Lian, L. Xing, S. Hunjan, C. Dumoulin, J. Levin, A. Lo, R. Watkins, K. Rohling, R. Giaquinto, D. Kim, D. Spielman, and B. Daniel, "Mapping of the prostate in endorectal coil-based MRI/MRSI and CT: a deformable registration and validation study," Medical physics, vol. 31, no. 11, pp. 3087-3094, July 2003.
30. T. Zhang, N. Orton, T. Mackie, and B. Paliwal, "Technical note: A novel boundary condition using contact elements for finite element based deformable image registration," Medical physics, vol. 31, no. 9, pp. 2412-5, Sept. 2004.
31. B. Delhay, "Estimation, spatio-temporelle de mouvement et suivi de structures déformables. Application l'imagerie dynamique du coeur et du thorax," Ph.D. dissertation, Institut National des Sciences appliques de Lyon, 2006.
32. B. Delhay, P. Clarysse, C. Pera, and I. E. Magnin, "A spatio-temporal deformation model for dense motion estimation in periodic cardiac image sequences," in Workshop MICCAI 2006 : From Statistical Atlases to Personalized Models : Understanding Complex Diseases in Populations and Individuals., Copenhage Denmark, 2006, pp. 87-90.
33. T. W. Sederberg and S. R. Parry, "Free-Form Deformation of solid geometric models," Proceedings of SIGGRAPH 86, Computer Graphics 20, vol. 4, pp. 151-159, August 1986.
34. D. Rueckert, L. I. Sonoda, C. Hayes, D. L. Hill, M. O. Leach, and D. J. Hawkes, "Nonrigid registration using Free-Form Deformations: application to breast MR images." IEEE Trans. Med. Imag., vol. 18, no. 8, pp. 712-721, August 1999.
35. M. J. Ledesma-Carbayo, J. Kybic, M. Deseo, A. Santos, M. Shuling, and P. H. ans M. Unser, "Spatio-temporal nonrigid registration for ultrasound cardiac motion estimation," IEEE Trans. Med. Imag., vol. 24, no. 9, pp. 1113-1126, Sept 2005.
36. V. Noblet, C. Heinrich, F. Heitz, and J. Armspach, "3-D deformable image registration: a topology preservation scheme based on hierarchical deformation models and interval analysis optimization," IEEE Trans. Image Processing, vol. 14, no. 5, pp. 553-566, May 2005.
37. T. Rohlfing, C. Maurer, D. Bluemke, and M. Jacobs, "Volume- preserving non-rigid registration of MR breast images using free-form deformation with an incompressibility constraint," IEEE Trans. Med. Imag., vol. 22, no. 6, pp. 730-741, June 2003.
38. S. Lee, G. Wolberg, and S. Y. Shin, "Scattered data interpolation, with multilevel B-Splines," IEEE Trans. Visual. Comput. Graphics, vol. 3, no. 3, pp. 228-244, 1997.
39. D. Sarrut, V. Boldea, S. Miguet, and C. Ginestet, "Simulation of 4D CT images from deformable registration between inhale and exhale breath-hold CT scans," Medical physics, 2006, to appear.
40. V. Boldea, D. Sarrut, and S. Clippe, "Lung deformation estimation with non-rigid registration for radiotherapy treatment," in Medical Image Computing and Computer-Assisted Intervention MICCAI'2003, vol. 2878. Springer Verlag, Lecture Notes in Computer Science, 2003, pp. 770-7.
41. V. Boldea, D. Sarrut, and C. Carrie, "Comparison of 3D dense deformable registration methods for breath-hold reproducibility study in radiotherapy," in SPIE Medical Imaging: Visualization, Image-Guided Procedures, and Display, vol. 5747, 2005, pp. 222-230.
42. J. Thirion, "Image matching as a diffusion process: an analogy with Maxwell's demons," Medical Image Analysis, vol. 2, no. 3, pp. 243-260, 1998.
43. X. Pennec, P. Cachier, and N. Ayache, "Understanding the demon's algorithm: 3D non rigid registration by gradient descent," in Medical Image Computing and Computer-Assisted Intervention MICCAI'99, C. Taylor and A. Colschester, Eds., vol. 1679. Cambridge, UK: Springer Verlag, Lecture Notes in Computer Science, 1999, pp. 597-605.
44. P. Cachier and N. Ayache, "Isotropic energies, filters and splines for vectorial regularizaron," J. of Math. Imaging and Vision, vol. 20, no. 3, pp. 251-265, May 2004.
45. R. Deriche, "Recursively implementing the gaussian and its derivatives," INRIA, Tech. Rep. 1893, Apr. 1993, http://www.inria.fr/rrrt/ rr-1893.html.
46. Q. Grimal, A. Watzky, and S. Naili, "Nonpenetrating impact on the thorax : a study of the wave propagation," Comptes Rendus de l'Academie des Sciences, vol. IIb, no. 329, pp. 655-662, 2001.
47. K. Brock, M. Sharpe, L. Dawson, S. Kim, and D. Jaffray, "Accuracy of finite element model-based multi-organ deformable image registration," Medical physics, vol. 32, no. 6, pp. 1647-59, June 2005.
48. P. Villard, M. Beuve, B. Shariat, V. Baudet, and F. Jaillet, "Simulation of lung behaviour with finite elements: Influence of bio-mechanical parameters," in MEDIVIS '05: Proceedings of the Third International Conference on Medical Information Visuullsatlon-BloMedical Visualisation. Washington, DC, USA: IEEE Computer Society, 2005, pp. 9-14.
49. W. Lorensen and H. Cline, "Marching cubes: a high resolution 3D surface reconstruction algorithm," Computer Graphics, vol. 21, pp. 163-169, 1987.
50. P. Villard, M. Beuve, B. Shariat, V. Baudet, and F. Jaillet, "Lung mesh, generation to simulate breathing motion with a finite element method," in Information Visualisation. London, GB: IEEE Computer Society, 2004, pp. 194-199.
51. M. L. Moy and S. H. Loring, "Compliance," Seminar in respiratory and critical care médecine, vol. 19, no. 4, pp. 349-359, 1998.
52. J. Humphrey, "A possible role of the pleura in lung mechanics," J Biomech, vol. 20, no. 8, pp. 773-777, 1987.
53. O. C. Zienkiewicz and R. L. Taylor, The finite element method, 5th ed. Butterworth-Heinemann, 2000.
54. J. Simo and C. Miehe, "Associative coupled thermoplasticity at finite strains: formulation, numerical analysis and implementation," Comp. Meth. Appl. Mech. Eng., vol. 98, pp. 41-104, 1992.