TAPPA: Topological analysis of pathway phenotype association

Bioinformatics

Volumn 23, Issue 22, 2007, Pages 3100-3102

  Gao, Shouguo ^a   Wang, Xujing ^a  

^a CHILDREN S HOSPITAL OF WISCONSIN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTION FACTOR;

ARTICLE; BIOINFORMATICS; COMPUTER PROGRAM; DATA EXTRACTION; GENE EXPRESSION PROFILING; GENE LOCATION; GENE TARGETING; GENETIC ASSOCIATION; MICROARRAY ANALYSIS; ONLINE SYSTEM; PHENOTYPE; PHENOTYPIC VARIATION; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS;

EID: 36448935634     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btm460     Document Type: Article

References (8)

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4. Li,H. et al. (2006) Integrative genetic analysis of transcription modules: Towards filling the gap between genetic loci and inherited traits. Hum. Mol. Genet., 15, 481-492.
5. Liu,C-.C. et al. (2006) Topology-based cancer classification and related pathway mining using microarray data. Nucleic Acids Res., 34, 4069-4080.
6. Lu,X. et al. (2007) Hubs in biological interaction networks exhibit low changes in expression in experimental asthma. Mol. Syst. Biol., 3, 98.
7. Subramanian,A. et al. (2003) Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl Acad. Sci. USA, 102, 15545-15550.
8. Tuck,D.P. et al. (2006) Characterizing disease states from topological properties of transcriptional regulatory networks. BMC Bioinformatics, 7, 236.