Noise and artifact removal in knife-edge scanning microscopy

2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings

Volumn , Issue , 2007, Pages 556-559

  Mayerich, D ^a   McCormick, B H ^a   Keyser, J ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

Author keywords

Chatter; Knife edge microscopy; Lighting artifacts; Volumetric data capture

Indexed keywords

DIAMOND-KNIFE ULTRAMICROTOME; KNIFE-EDGE MICROSCOPY; LIGHTING ARTIFACTS; VOLUMETRIC DATA CAPTURE;

ALGORITHMS; IMAGE ACQUISITION; IMAGE QUALITY; IMAGE REGISTRATION; MEDICAL IMAGING; TISSUE;

IMAGING SYSTEMS;

EID: 36349026453     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ISBI.2007.356912     Document Type: Conference Paper

References (12)

1. J. B. Pauley, Ed., Handbook of Biological Confocal Microscopy, Plenum Press, New York, 1995.
2. Winfried Denk, James H. Strickler, and Watt W. Webb, "Two-photon laser scanning fluorescence microscopy," Science, vol. 248, no. 4951, pp. 73-76, Apr. 1990.
3. Winfried Denk and Heinz Horstmann, "Serial blockface scanning electron microscopy to reconstruct three-dimensional tissue nanostructure," PLoS Biology, vol. 2, no. 11, pp. e329, Nov. 2004.
4. P. Greenspan, E. P. Mayer, and S. D. Fowler, "Nile red: a selective fluorescent stain for intracellular lipid droplets," The Journal of Cell Biology, vol. 100, pp. 965-973, 1985.
5. M. Chalfle, Y. Tu, G. Euskirchen, W. W. Ward, and D. C. Prasher, "Green fluorescent protein as a marker for gene expression," Science, vol. 263, no. 5148, pp. 802-805, Feb. 1994.
6. Tatsuyuki Takada, Keiko Iida, Takeo Awaji, Kazumi Itoh, Riichi Takahashi, Akiko Shibui, Kenichi Yoshida, Sumio Sugano, and Gozoh Tsujimoto, "Selective production of transgenic mice using green fluorescent protein as a marker," Nature Biotechnology, vol. 15, no. 5, pp. 458, May 1997.
7. Bruce McCormick, "Knife-edge scanning microscope (kesm 1.5): Optics and cameras," Tech. Rep., Department of Computer Science, Texas A&M University, College Station, TX, Oct. 2006.
8. R. Phillips, "Diamond knife ultra microtomy of metals and the structure of microtomed sections," British Journal of Applied Physics, vol. 12, pp. 554-558, Oct. 1961.
9. Marian Wiercigroch and Erhan Budak, "Sources of non-linearities, chatter generation and suppression in metal cutting," Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, vol. 359, no. 1781, pp. 663-693, Apr. 2001.
10. B. H. McCormick, D. M. Mayerich, and M. Wiercigroch, "Nanomachining for high-resolution scanning of mammalian brain microstructure," in Proceedings, 11th International Conference on Fracture, Turin, Italy, March 2005.
11. Rafael C. Gonzalez and Richard E. Woods, Digital Image Processing, Prentice Hall, 2nd edition, 2002.
12. F. T. Kuan, A. A. Sawchuk, T. C. Strand, and P. Chavel, "Adaptive noise smoothing filter for images with signaldependent noise," IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 7, no. 2, pp. 165-177, 1985.