Topological correction of volumetric binary brain segmentation using a multiscale algorithm

2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings

Volumn , Issue , 2007, Pages 1308-1311

  Lin, Chen ^a   Wagenknecht, Gudrun ^a  

^a FORSCHUNGSZENTRUM JÜLICH   (Germany)

Author keywords

Brain regions; Morphological operations; Surface reconstruction; Topology

Indexed keywords

GRAPH THEORY; IMAGE SEGMENTATION; MEDICAL IMAGING; MORPHOLOGY; NEUROLOGY;

ANATOMICAL STRUCTURES; MULTISCALE ALGORITHM; TOPOLOGICAL CORRECTNESS;

BRAIN;

EID: 36348959003     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ISBI.2007.357100     Document Type: Conference Paper

References (9)

1. N. Kriegeskorte and R. Goebel, "An efficient algorithm for topologically correct segmentation of the cortical sheet in anatomical mr volumes," NeuroImage, vol. 14, pp. 329-346, 2001.
2. A. M. Dale, B. Fischl, and M. I. Sereno, "Cortical surface-based analysis i: Segmentation and surface reconstruction," NeuroImage, vol. 9, pp. 179-194, 1999.
3. B. Fischl, A. Liu, and M. Dale, "Automated mainfold surgery: Constructing geometrically accurate and topologically correct methods of the human cerebral cortex.," IEEE Trans. Med. Imag., vol. 20, pp. 70-80, 2001.
4. D. Shattuck and M. Leahy, "Automated graph-based analysis and correction of cortical volume topology," IEEE Trans. Med. Imag., vol. 20, no. 11, pp. 1167-1177, 2001.
5. X. Han, C. Xu, U. Neto, and J.L. Prince, "Topology correction in brain cortex segmentation using a multiscale, graph-based algorithm," IEEE Trans. Med. Imag., vol. 21, no. 2, pp. 109-121, 2002.
6. Lin Chen and Gudrun Wagenknecht, "Automated topology correction for human brain segmentation," Proc. Int'I Conf. Medical Image Computing and Computer Assisted Interventions (MICCAI'2006), vol. 2, pp. 316-323, 2006.
7. Z. Wood, H. Hoppe, M. Desbrun, and P. schroeder, "Removing excess topology from isosurfaces," ACM Transactions on graphics, vol. 23, pp. 190-208, 2004.
8. G. Bertrand, "Simple points, topological numbers and geodesic neighborhoods in cubic grids," Pattern Recognition Letters, vol. 15, pp. 1028-1032, 1994.
9. Lin Chen and Gudrun Wagenknecht, "Topology correction in brain segmentation using a multiscale algorithm," Advances in Medical Engineering, in Proceedings in Physics, Springer-Verlag, 2006, in press.