Cloning, expression, purification, and characterization of AmphiTip30, a member of short-chain dehydrogenases/reductases family from the amphioxus Branchiostoma belcheri tsingtauense

Protein Expression and Purification

Volumn 57, Issue 1, 2008, Pages 63-71

  Wang, Shaohui ^a   Zhao, Bosheng ^a   Zhang, Shicui ^b   Ji, Hongfang ^a  

^a SHANDONG UNIVERSITY OF TECHNOLOGY   (China)

^b OCEAN UNIVERSITY OF CHINA   (China)

Author keywords

Amphioxus Branchiostoma belcheri; Characterization; Cloning; Dehydrogenases reductases activity; Expression; TIP30

Indexed keywords

MERCAPTOETHANOL; NICOTINAMIDE ADENINE DINUCLEOTIDE; OXIDOREDUCTASE; RECOMBINANT PROTEIN; SIGNAL PEPTIDE;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CHEMISTRY; ESCHERICHIA COLI; FEMALE; GENE EXPRESSION; GENETICS; IMMUNOHISTOCHEMISTRY; INVERTEBRATE CHORDATA; ISOLATION AND PURIFICATION; METABOLISM; MOLECULAR CLONING; MOLECULAR GENETICS; MOLECULAR WEIGHT; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; OVARY; PHYLOGENY; PROMOTER REGION; PROTEIN BINDING; PROTEIN TERTIARY STRUCTURE;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CHORDATA, NONVERTEBRATE; CLONING, MOLECULAR; ESCHERICHIA COLI; FEMALE; GENE EXPRESSION; IMMUNOHISTOCHEMISTRY; MERCAPTOETHANOL; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; NAD; OPEN READING FRAMES; OVARY; OXIDOREDUCTASES; PHYLOGENY; PROMOTER REGIONS (GENETICS); PROTEIN BINDING; PROTEIN SORTING SIGNALS; PROTEIN STRUCTURE, TERTIARY; RECOMBINANT PROTEINS;

BRANCHIOSTOMA BELCHERI; BRANCHIOSTOMA LANCEOLATUM; ESCHERICHIA COLI; VERTEBRATA;

EID: 36248962613     PISSN: 10465928     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pep.2007.08.014     Document Type: Article

References (32)

1. Xiao H., Tao Y., Greenblatt J., and Roeder R.G. A cofactor, TIP30, specifically enhances HIV-1 Tat-activated transcription. Proc. Natl. Acad. Sci. USA 95 (1998) 2146-2151
2. Xiao H., Palhan V., Yang Y., and Roeder R.G. TIP30 has an intrinsic kinase activity required for up-regulation of a subset of apoptotic genes. EMBO J. 19 (2000) 956-963
3. Ito M., Jiang C., Krumm K., Zhang X., Pecha J., Zhao J., et al. TIP30 deficiency increases susceptibility to tumorigenesis. Cancer Res. 63 (2003) 8763-8767
4. NicAmhlaoibh R., and Shtivelman E. Metastasis suppressor CC3 inhibits angiogenic properties of tumor cells in vitro. Oncogene 20 (2001) 270-275
5. Shi M., Zhang X., Wang P., Zhang H.W., Zhang B.H., and Wu M.C. TIP30 regulates apoptosis-related genes in its apoptotic signal transduction pathway. World J. Gastroenterol. 11 (2005) 221-227
6. Shtivelman E. A link between metastasis and resistance to apoptosis of variant small cell lung carcinoma. Oncogene 14 (1997) 2167-2173
7. Zhao J., Zhang X., Shi M., Xu H., Jin J., Ni H., et al. TIP30 inhibits growth of HCC cell lines and inhibits HCC Xenografts in mice in combination with 5-FU. Hepatology 44 (2006) 205-215
8. Frank W.K., and Shtivelman E. Inhibition of nuclear import by the proapoptotic protein CC3. Mol. Cell. Biol. 24 (2004) 7091-7101
9. Jiang C., Ito M., Piening V., Bruck K., Robert G.R., and Xiao H. TIP30 interacts with an estrogen receptor α-interacting coactivator CIA and regulates c-myc transcription. J. Biol. Chem. 279 (2004) 27781-27789
10. Omari K.E., Bird L.E., Nichols C.E., Ren J.S., and Stammers D.K. Crystal structure of CC3(TIP30). J. Biol. Chem. 280 (2005) 18229-18236
11. Holland L.Z., Laudet V., and Schubert M. The chordate amphioxus: an emerging model organism for developmental biology. Cell. Mol. Life Sci. 61 (2004) 2290-2308
12. Strokes M.D., and Holland N.D. The lancelet: also known as 'amphioxus' this curious creature has returned to the limelight as a player in the phylogenetic history of the vertebrates. Am. Sci. 86 (1998) 552-560
13. Chan S.J., Cao Q., and Steiner D.F. Evolution of the insulin superfamily: cloning of a hybrid insulin/insulin-like growth factor cDNA from amphioxus. Proc. Natl. Acad. Sci. USA 87 (1990) 9319-9323
14. Garcia-Fernandez J., and Holland P.W. Amphioxus Hox genes: insights into evolution and development. Int. J. Dev. Biol. Suppl.1 (1996) 71S-72S
15. Holland L.Z., and Holland N.D. Chordate origins of the vertebrate central nervous system. Curr. Opin. Neurobiol. 9 (1999) 596-602
16. Holland L.Z., Holland P.W.H., and Holland N.D. Revealing homologies between body parts of distantly related animals by in situ hybridization to developmental genes: amphioxus versus vertebrates. In: Ferraris J.D. (Ed). Molecular Zoology: Advances, Strategies, and Protocols (1996), Wiley-Liss, New York 267-282
17. Wada H., and Satoh N. Details of the evolutionary history from invertebrates to vertebrates, as deduced from the sequences of 18S rDNA. Proc. Natl. Acad. Sci. USA 91 (1994) 1801-1804
18. Yuan J., Zhang S., Liu Z., Luan Z., and Hu G. Cloning and phylogenetic analysis of an amphioxus myogenic bHLH gene AmphiMDF. Biochem. Biophys. Res. Commun. 301 (2003) 960-967
19. Rehm B.H. Bioinformatic tools for DNA/protein sequence analysis, functional assignment of genes and protein classification. Appl. Microbiol. Biotechnol. 57 (2001) 579-592
20. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids. Res. 25 (1997) 3389-3402
21. Burland T.G. DNASTAR's Lasergene sequence analysis software. Methods Mol. Biol. 132 (2000) 71-91
22. J. Felsenstein, PHYLIP (Phylogeny Interference Package), version 3.5c, Department of Genetics. Seattle, University of Washington, Washington, USA, 1993.
23. Fan C., Zhang S., Liu Z., and Li L. Identification and expression of a novel class of glutathione-S-transferase from amphioxus Branchiostoma belcheri with implications to the origin of vertebrate liver. Int. J. Biochem. Cell Biol. 39 (2007) 450-461
24. Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227 (1970) 680-685
25. Liang Y., Zhang S., Lun L., and Han L. Presence and localization of antithrombin and its regulation after acute lipopolysaccharide exposure in amphioxus, with implications for the origin of vertebrate liver. Cell Tissue Res. 323 (2006) 537-541
26. Kozak M. An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs. Nucleic Acids Res. 15 (1987) 8125-8148
27. Letunic I., Goodstadt L., Dickens N.J., Doerks T., Schultz J., Mott R., et al. Recent improvements to the SMART domain-based sequence annotation resource. Nucleic Acids Res. 30 (2002) 242-244
28. Nielsen H., Engelbrecht J., Brunak S., and Von Heijne G. Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng. 10 (1997) 1-6
29. Xu J., and Wang Z. Fluorimetry. third ed. (2006), Science press, Beijing pp. 65-69
30. Baker M.E., Yan L., and Pear M.R. Three-dimensional model of human TIP30, a coactivator for HIV-1 Tat-activated transcription, and CC3, a protein associated with metastasis suppression. Cell. Mol. Life Sci. 57 (2000) 851-858
31. Yvonne K., Udo O., Hans J., and Bengt P. Short-chain dehydrogenases/reductases (SDRs) coenzyme-based functional assignments in completed genomes. Eur. J. Biochem. 269 (2002) 4409-4417
32. Baker M.E. TIP30, A cofactor for HIV-1 Tat-activated transcription, is homologous to short-chain dehydrogenases/reductases. Curr. Biol. 9 (1999) R471