Isolation and characterization of Arthrobacter sp. strain MCM B-436, an atrazine-degrading bacterium, from rhizospheric soil

International Biodeterioration and Biodegradation

Volumn 60, Issue 4, 2007, Pages 273-278

  Vaishampayan, Parag A ^a   Kanekar, Pradnya P ^a   Dhakephalkar, Prashant K ^a  

^a AGHARKAR RESEARCH INSTITUTE   (India)

Author keywords

Arthrobacter sp.; Atrazine; Biodegradation; Enzyme chlorohydrolase; trzN

Indexed keywords

BACTERIA; BIODEGRADATION; BIODIVERSITY; PLANTS (BOTANY); SOILS; TOXICITY;

ARTHROBACTER SP.; ATRAZINE-RESISTANT PLANTS; ENZYME CHLOROHYDROLASE; RHIZOSPHERE;

HERBICIDES;

ATRAZINE; BIODEGRADATION; BIOREMEDIATION; GENETIC STRUCTURE; MICROBIAL COMMUNITY; RHIZOBACTERIUM; RHIZOSPHERE; SOIL POLLUTION;

ASIA; EURASIA; INDIA; SOUTH ASIA;

ARTHROBACTER; ARTHROBACTER SP.; BACTERIA (MICROORGANISMS); NOCARDIOIDES SP.;

EID: 36049047111     PISSN: 09648305     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ibiod.2007.05.001     Document Type: Article

References (29)

1. Aislabie J., Bej A.K., Ryburn J., Lloyd N., and Wilkins A. Characterization of Arthrobacter nicotinovorans HIM, an atrazine-degrading bacterium, from agricultural soil New Zealand. FEMS Microbiology Ecology 52 (2005) 279-286
2. Alvey S., and Crowley D.E. Influence of organic amendments on biodegradation of atrazine as a nitrogen source. Journal of Environmental Quality 246 (1995) 1156-1162
3. Alvey S., and Crowley D.E. Survival and activity of an atrazine-mineralizing bacterial consortium in rhizospheric soil. Environmental Science and Technology 30 (1996) 1596-1603
4. Anderson T.A., and Coats J.R. Screening rhizospheric soil samples for the ability to mineralize elevated concentrations of atrazine and metolachlor. Journal of Environmental Science and Health B 304 (1995) 473-484
5. Behki R., Topp E., Dick W., and Germon P. Metabolism of the herbicide atrazine by Rhodococcus strains. Applied Environmental Microbiology 59 6 (1993) 1955-1959
6. Brenner D.J. In: Holt J.G. (Ed). Bergey's Manual of Systematic Bacteriology vol. 1 (1989), Williams and Wilkins, Baltimore, USA
7. Cai B., Han Y., Liu B., Ren Y., and Jiang S. Isolation and characterization of an atrazine-degrading bacterium from industrial wastewater in China. Letters in Applied Microbiology 36 (2003) 272-276
8. Costa R.M., Camper N.D., and Riley M.B. Atrazine degradation in a containerized rhizosphere system. Journal of Environmental Science and Health B 35 6 (2000) 677-687
9. Cull, R., Hunter, H., Hunter, M., Truong, P., 2000. Application of vetiver grass technology in off-site pollution control. Tolerance to herbicides under selected wetland conditions. In: Proceedings of the Second International Vetiver Conference, Thailand.
10. de Souza M.L., Sadowsky M.J., and Wackett L.P. Atrazine chlorohydrolase from Pseudomonas sp. strain ADP: gene sequence, enzyme purification and protein characterization. J. Bacteriol. 178 16 (1996) 4894-4900
11. de Souza M.N., Seffernick J., Martinez B., Sadowsky M.J., and Wackett L.P. The atrazine catabolism genes atzABC are widespread and highly conserved. The Journal of Bacteriology 1807 (1998) 1951-1954
12. Fruchey I., Shapir N., Sadowsky M.J., and Wackett L.P. On the origin of cyanuric acid hydrolase: purification substrate, and prevalence of AtzD from Pseudomonas sp. strain ADP. Applied Environmental Microbiology 69 6 (2003) 3653-3657
13. García-González V., Govantes F., Shaw L.J., Burns R.G., and Santero E. Nitrogen control of atrazine utilization in Pseudomonas sp. strain ADP. Applied Environmental Microbiology 69 12 (2003) 6987-6993
14. Gebendinger N., and Radosevich M. Inhibition of atrazine degradation by cyanizine and exogenous nitrogen in bacterial isolate M91-3. Applied Microbiology and Biotechnology 51 (1999) 375-381
15. Jin R., and Ke J. Impact of atrazine disposal on the water resources of the Yang river in Zhangjiakou area in China. Bull. Environ. Contam. Toxicol. 68 (2002) 893-900
16. Laemmli U.K. Cleavage of structural protein during the assembly of the head of the bacteriophage T4. Nature London 227 (1970) 680-685
17. Lowry O.H., Rosenbrough N.J., Farr A.L., and Randall R.J. Protein measurement with the Folin Phenol reagent. Journal of Biological Chemistry 193 (1951) 265-275
18. Mandelbaum R.T., Allan D.L., and Wackett L.P. Isolation and characterization of a Pseudomonas sp. that mineralizes the s-triazine herbicide atrazine. Applied Environmental Microbiology 614 (1995) 1451-1457
19. Mulbry W.W., Zhu H., Nour S.M., and Topp E. The triazine hydrolase gene trzN from Nocardioides sp strain C190: cloning and construction of gene specific primers. FEMS Microbiology Letters 206 (2002) 75-79
20. Piutti S., Semon E., Landry D., Hartmann A., Dousset S., Lichtfouse E., Topp E., Soulas G., and Martin-Laurent F. Isolation and characterisation of Nocardioides sp. SP12, an atrazine-degrading bacterial strain possessing the gene trzN from bulk- and maize rhizosphere soil. FEMS Microbiology Letters 221 (2003) 111-117
21. Radosevich M., Traina S.J., Hao Y.-H., and Tuovinen O.H. Degradation and mineralization of atrazine by a soil bacterial isolate. Applied Environmental Microbiology 61 (1995) 297-302
22. Rousseaux S., Hartmann A., and Soulas G. Isolation and characterization of new gram-negative and gram-positive atrazine degrading bacteria from different French soils. FEMS Microbiology Ecology 36 (2001) 211-222
23. Rousseaux S., Soulas G., and Hartmann A. Plasmid localisation of atrazine-degrading genes in newly described Chelatobacter and Arthrobacter strains. FEMS Microbiology Ecology 41 (2002) 69-75
24. Sajjaphan K., Shapir N., Wackett L.P., Palmer M., Blackmon B., Tomkins J., and Sadowsky M.J. Arthrobacter aurescens TC1 atrazine catabolism genes trzN, atzB, and atzC Are linked on a 160-kilobase region and are functional in Escherichia coli. Applied and Environmental Microbiology 707 (2004) 4402-4407
25. Sambrook J., Fritsch E.F., and Maniatis T. Molecular Cloning: A Laboratory Manual. second ed. (1998), Cold Spring Harbour Laboratory Press, Cold Spring Harbor, NY
26. Seffernick J.L., Shapir N., Schoeb M., Johnson G., Sadowsky M.J., and Wackett L.P. Enzymatic degradation of chlorodiamino-s-triazine. Applied Environmental Microbiology 689 (2002) 4672-4675
27. Strong L.C., Rosendahl C., Johnson G., Sadowsky M.J., and Wackett L.P. Arthrobacter auresens TC1 metabolizes diverse s-triazine ring compounds. Applied Environmental Microbiology 68 12 (2002) 5973-5980
28. Struthers J.K., Jayachandran K., and Moorman T.B. Biodegradation of atrazine by Agrobacterium radiobacter J14a and use of this strain in bioremediation of contaminated soil. Applied Environmental Microbiology 649 (1998) 3368-3375
29. Wackett L.P., Sadowsky M.J., Martinez B., and Shapir N. Biodegradation of atrazine and related s-triazines compounds: from enzymes to field studies. Applied Microbiology and Biotechnology 58 (2002) 39-45