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Volumn 210, Issue 1-2, 2008, Pages 1-14

Effects of bacterial dynamics on organic matter decomposition and nutrient release from sediments: A modeling study

Author keywords

Bacteria; Diagenesis; Model; Nutrient; Sediment

Indexed keywords

BACTERIA; BIOLOGICAL MATERIALS; BIOMASS; DECOMPOSITION; ESTUARIES; MATHEMATICAL MODELS; NUTRIENTS;

EID: 36049019571     PISSN: 03043800     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ecolmodel.2007.06.026     Document Type: Article
Times cited : (57)

References (63)
  • 1
    • 0034129843 scopus 로고    scopus 로고
    • Daisy: an open soil-crop-atmosphere system model
    • Abrahamsen P., and Hansen S. Daisy: an open soil-crop-atmosphere system model. Environ. Model. Softw. 15 (2000) 313-330
    • (2000) Environ. Model. Softw. , vol.15 , pp. 313-330
    • Abrahamsen, P.1    Hansen, S.2
  • 2
    • 0042285642 scopus 로고    scopus 로고
    • Simultaneous measurements of organic carbon mineralization and bacterial production in oxic and anoxic lake sediments
    • Bastviken D., Olsson M., and Tranvik L. Simultaneous measurements of organic carbon mineralization and bacterial production in oxic and anoxic lake sediments. Microbiol. Ecol. 46 (2003) 73-82
    • (2003) Microbiol. Ecol. , vol.46 , pp. 73-82
    • Bastviken, D.1    Olsson, M.2    Tranvik, L.3
  • 3
    • 84986850982 scopus 로고
    • Thymidine incorporation and microbial respiration in the surface sediment of a hypereutrophic lake
    • Bell R.T., and Ahlgren I. Thymidine incorporation and microbial respiration in the surface sediment of a hypereutrophic lake. Limnol. Oceanogr. 32 (1987) 476-482
    • (1987) Limnol. Oceanogr. , vol.32 , pp. 476-482
    • Bell, R.T.1    Ahlgren, I.2
  • 5
    • 0035041560 scopus 로고    scopus 로고
    • Dominance of bacterial metabolism in oligotrophic relative to eutrophic waters
    • Biddanda B., Ogdahl M., and Cotner J. Dominance of bacterial metabolism in oligotrophic relative to eutrophic waters. Limnol. Oceanogr. 46 (2001) 730-739
    • (2001) Limnol. Oceanogr. , vol.46 , pp. 730-739
    • Biddanda, B.1    Ogdahl, M.2    Cotner, J.3
  • 6
    • 0019998634 scopus 로고
    • An idealized model of nitrogen recycling in marine sediments
    • Billen G. An idealized model of nitrogen recycling in marine sediments. Am. J. Sci. 282 (1982) 512-541
    • (1982) Am. J. Sci. , vol.282 , pp. 512-541
    • Billen, G.1
  • 8
    • 0032214018 scopus 로고    scopus 로고
    • Microbial growth in soil and nitrogen turnover: a theoretical model considering the activity state of microorganisms
    • Blagodatsky S.A., and Richter O. Microbial growth in soil and nitrogen turnover: a theoretical model considering the activity state of microorganisms. Soil Biol. Biochem. 30 (1998) 1743-1755
    • (1998) Soil Biol. Biochem. , vol.30 , pp. 1743-1755
    • Blagodatsky, S.A.1    Richter, O.2
  • 9
    • 0032847656 scopus 로고    scopus 로고
    • Soil organic matter quality interpreted thermodynamically
    • Bosatta E., and Ågren G.I. Soil organic matter quality interpreted thermodynamically. Soil Biol. Biochem. 31 (1999) 1889-1891
    • (1999) Soil Biol. Biochem. , vol.31 , pp. 1889-1891
    • Bosatta, E.1    Ågren, G.I.2
  • 11
    • 0028570785 scopus 로고
    • A modelling study of discontinuous biological irrigation
    • Boudreau B.P., and Marinelli R.L. A modelling study of discontinuous biological irrigation. J. Mar. Res. 52 (1994) 947-968
    • (1994) J. Mar. Res. , vol.52 , pp. 947-968
    • Boudreau, B.P.1    Marinelli, R.L.2
  • 12
    • 0026300855 scopus 로고
    • The kinetics of organic matter mineralization in anoxic marine sediments
    • Burdige D.J. The kinetics of organic matter mineralization in anoxic marine sediments. J. Mar. Res. 49 (1991) 727-761
    • (1991) J. Mar. Res. , vol.49 , pp. 727-761
    • Burdige, D.J.1
  • 13
    • 0024251137 scopus 로고
    • Comparison of microbial dynamics in marine and freshwater sediments: contrasts in anaerobic carbon catabolism
    • Capone D.G., and Kiene R.P. Comparison of microbial dynamics in marine and freshwater sediments: contrasts in anaerobic carbon catabolism. Limnol. Oceanogr. 33 (1988) 725-749
    • (1988) Limnol. Oceanogr. , vol.33 , pp. 725-749
    • Capone, D.G.1    Kiene, R.P.2
  • 15
    • 0002381096 scopus 로고
    • Bacterial production in fresh and saltwater ecosystems: a cross-system overview
    • Cole J.J., Findlay S., and Pace M.L. Bacterial production in fresh and saltwater ecosystems: a cross-system overview. Mar. Ecol. Prog. Ser. 43 (1988) 1-10
    • (1988) Mar. Ecol. Prog. Ser. , vol.43 , pp. 1-10
    • Cole, J.J.1    Findlay, S.2    Pace, M.L.3
  • 16
    • 0032426261 scopus 로고    scopus 로고
    • Bacterial growth efficiency in natural aquatic systems
    • del Giorgio P.A., and Cole J.J. Bacterial growth efficiency in natural aquatic systems. Annu. Rev. Ecol. Syst. 29 (1998) 503-541
    • (1998) Annu. Rev. Ecol. Syst. , vol.29 , pp. 503-541
    • del Giorgio, P.A.1    Cole, J.J.2
  • 17
    • 0033834871 scopus 로고    scopus 로고
    • Decomposition of rice straw and microbial carbon use efficiency under different soil temperatures and moistures
    • Devevre O.C., and Horwath W.R. Decomposition of rice straw and microbial carbon use efficiency under different soil temperatures and moistures. Soil Biol. Biochem. 32 (2000) 1773-1785
    • (2000) Soil Biol. Biochem. , vol.32 , pp. 1773-1785
    • Devevre, O.C.1    Horwath, W.R.2
  • 19
  • 20
    • 0026323102 scopus 로고
    • On multiple-nutrient-limited growth of microorganisms, with special reference to dual limitation by carbon and nitrogen substrates
    • Egli T. On multiple-nutrient-limited growth of microorganisms, with special reference to dual limitation by carbon and nitrogen substrates. Antonie Van Leeuwenhoek 60 (1991) 225-234
    • (1991) Antonie Van Leeuwenhoek , vol.60 , pp. 225-234
    • Egli, T.1
  • 21
    • 0027429478 scopus 로고
    • Kinetics of microbial growth with mixtures of carbon sources
    • Egli T., Lendenmann U., and Snozzi M. Kinetics of microbial growth with mixtures of carbon sources. Antonie Van Leeuwenhoek 63 (1993) 289-298
    • (1993) Antonie Van Leeuwenhoek , vol.63 , pp. 289-298
    • Egli, T.1    Lendenmann, U.2    Snozzi, M.3
  • 23
    • 0024248020 scopus 로고
    • Contribution of bacteria to release and fixation of phosphorus in lake sediments
    • Gächter R., Meyer J.S., and Mares A. Contribution of bacteria to release and fixation of phosphorus in lake sediments. Limnol. Oceanogr. 33 (1988) 1542-1558
    • (1988) Limnol. Oceanogr. , vol.33 , pp. 1542-1558
    • Gächter, R.1    Meyer, J.S.2    Mares, A.3
  • 24
    • 0030745958 scopus 로고    scopus 로고
    • Microbial response of a freshwater Benthic community to a simulated diatom sedimentation event: interactive effects of Benthic Fauna
    • Goedkoop W., Gullberg K.R., Johnson R.K., and Ahlgren I. Microbial response of a freshwater Benthic community to a simulated diatom sedimentation event: interactive effects of Benthic Fauna. Microbiol. Ecol. 34 (1997) 131-143
    • (1997) Microbiol. Ecol. , vol.34 , pp. 131-143
    • Goedkoop, W.1    Gullberg, K.R.2    Johnson, R.K.3    Ahlgren, I.4
  • 25
    • 0034041020 scopus 로고    scopus 로고
    • Growth of marine bacteria in batch and continuous culture under carbon and nitrogen limitation
    • Goldman J.C., and Dennett M.R. Growth of marine bacteria in batch and continuous culture under carbon and nitrogen limitation. Limnol. Oceanogr. 45 (2000) 789-800
    • (2000) Limnol. Oceanogr. , vol.45 , pp. 789-800
    • Goldman, J.C.1    Dennett, M.R.2
  • 26
    • 0002798993 scopus 로고
    • The effect of carbon on algal growth-its relationship to eutrophication
    • Goldman J.C., Porcella D.B., Middlebrooks E.J., and Toerien D.F. The effect of carbon on algal growth-its relationship to eutrophication. Water Res. 6 (1972) 637-679
    • (1972) Water Res. , vol.6 , pp. 637-679
    • Goldman, J.C.1    Porcella, D.B.2    Middlebrooks, E.J.3    Toerien, D.F.4
  • 27
    • 0020872365 scopus 로고
    • The chemical composition of lakes in the north-central United States
    • Gorham E., Dean W.E., and Sanger J.E. The chemical composition of lakes in the north-central United States. Limnol. Oceanogr. 28 (1983) 287-301
    • (1983) Limnol. Oceanogr. , vol.28 , pp. 287-301
    • Gorham, E.1    Dean, W.E.2    Sanger, J.E.3
  • 28
    • 84983847441 scopus 로고
    • Some relationships between algal standing crop, water chemistry, and sediment chemistry in the English Lakes
    • Gorham E., Lund J.W., Sanger J.E., and Dean W.E. Some relationships between algal standing crop, water chemistry, and sediment chemistry in the English Lakes. Limnol. Oceanogr. 19 (1974) 601-617
    • (1974) Limnol. Oceanogr. , vol.19 , pp. 601-617
    • Gorham, E.1    Lund, J.W.2    Sanger, J.E.3    Dean, W.E.4
  • 29
    • 33645535439 scopus 로고    scopus 로고
    • Activated sludge modelling: past, present and future
    • Gujer W. Activated sludge modelling: past, present and future. Water Sci. Technol. 53 (2006) 111-119
    • (2006) Water Sci. Technol. , vol.53 , pp. 111-119
    • Gujer, W.1
  • 31
    • 0029516516 scopus 로고
    • Kinetics of phytoplankton decay during simulated sedimentation: changes in biochemical composition and microbial activity under oxic and anoxic conditions
    • Harvey H.R., Tuttle J.H., and Bell J.T. Kinetics of phytoplankton decay during simulated sedimentation: changes in biochemical composition and microbial activity under oxic and anoxic conditions. Geochim. Cosmochim. Acta 59 (1995) 3367-3377
    • (1995) Geochim. Cosmochim. Acta , vol.59 , pp. 3367-3377
    • Harvey, H.R.1    Tuttle, J.H.2    Bell, J.T.3
  • 32
    • 0035865344 scopus 로고    scopus 로고
    • Evidence for non-selective preservation of organic matter in sinking marine particles
    • Hedges J.I., Baldock J.A., Gelinas Y., Lee C., Peterson M., and Wakeham S.G. Evidence for non-selective preservation of organic matter in sinking marine particles. Nature 409 (2001) 801-804
    • (2001) Nature , vol.409 , pp. 801-804
    • Hedges, J.I.1    Baldock, J.A.2    Gelinas, Y.3    Lee, C.4    Peterson, M.5    Wakeham, S.G.6
  • 34
    • 0032144374 scopus 로고    scopus 로고
    • Kinetic modeling of microbially-driven redox chemistry of subsurface environments: coupling transport, microbial metabolism and geochemistry
    • Hunter K.S., Wang Y., and Van Cappellen P. Kinetic modeling of microbially-driven redox chemistry of subsurface environments: coupling transport, microbial metabolism and geochemistry. J. Hydrol. 209 (1998) 53-80
    • (1998) J. Hydrol. , vol.209 , pp. 53-80
    • Hunter, K.S.1    Wang, Y.2    Van Cappellen, P.3
  • 35
    • 0033545359 scopus 로고    scopus 로고
    • Calibration of an early diagenesis model for high nitrate, low reactive sediments in a temperate latitude estuary (Great Ouse UK)
    • Kelly-Gerreyn B.A., Hydes D.J., Trimmer M., and Nedwell D.B. Calibration of an early diagenesis model for high nitrate, low reactive sediments in a temperate latitude estuary (Great Ouse UK). Mar. Ecol. Prog. Ser. 177 (1999) 37-50
    • (1999) Mar. Ecol. Prog. Ser. , vol.177 , pp. 37-50
    • Kelly-Gerreyn, B.A.1    Hydes, D.J.2    Trimmer, M.3    Nedwell, D.B.4
  • 36
    • 0032714705 scopus 로고    scopus 로고
    • Benthic bacterial secondary production measured via simultaneous 3H-thymidine and 14C-leucine incorporation, and its implication for the carbon cycle of a shallow macrophyte-dominated backwater system
    • Kirschner A.K.T., and Velimirov B. Benthic bacterial secondary production measured via simultaneous 3H-thymidine and 14C-leucine incorporation, and its implication for the carbon cycle of a shallow macrophyte-dominated backwater system. Limnol. Oceanogr. 44 (1999) 1871-1881
    • (1999) Limnol. Oceanogr. , vol.44 , pp. 1871-1881
    • Kirschner, A.K.T.1    Velimirov, B.2
  • 37
    • 0024825402 scopus 로고
    • The seasonality of nutrient regeneration in an organic-rich coastal sediment: kinetic modeling of changing pore-water nutrient and sulfate distributions
    • Klump J.V., and Martens C.S. The seasonality of nutrient regeneration in an organic-rich coastal sediment: kinetic modeling of changing pore-water nutrient and sulfate distributions. Limnol. Oceanogr. 34 (1989) 559-577
    • (1989) Limnol. Oceanogr. , vol.34 , pp. 559-577
    • Klump, J.V.1    Martens, C.S.2
  • 38
    • 84986753331 scopus 로고
    • Summer internal phosphorus supplies in Shagawa Lake, Minnesota
    • Larsen D.P., Schults D.W., and Malereg K.W. Summer internal phosphorus supplies in Shagawa Lake, Minnesota. Limnol. Oceanogr. 26 (1981) 740-753
    • (1981) Limnol. Oceanogr. , vol.26 , pp. 740-753
    • Larsen, D.P.1    Schults, D.W.2    Malereg, K.W.3
  • 40
    • 0027789792 scopus 로고
    • Lacustrine organic geochemistry-an overview of indicators of organic matter sources and diagenesis in lake sediments
    • Meyers P.A., and Ishiwatari R. Lacustrine organic geochemistry-an overview of indicators of organic matter sources and diagenesis in lake sediments. Org. Geochem. 20 (1993) 867-900
    • (1993) Org. Geochem. , vol.20 , pp. 867-900
    • Meyers, P.A.1    Ishiwatari, R.2
  • 41
    • 0032770513 scopus 로고    scopus 로고
    • A numerical model to estimate sediment oxygen levels and demand
    • (1217 pp.)
    • Park S.S., and Jaffé P.R. A numerical model to estimate sediment oxygen levels and demand. J. Environ. Qual. 28 (1999) 1219 (1217 pp.)
    • (1999) J. Environ. Qual. , vol.28 , pp. 1219
    • Park, S.S.1    Jaffé, P.R.2
  • 42
    • 43149122965 scopus 로고
    • Model for decomposition of organic material by microorganisms
    • Parnas H. Model for decomposition of organic material by microorganisms. Soil Biol. Biochem. 7 (1975) 161-169
    • (1975) Soil Biol. Biochem. , vol.7 , pp. 161-169
    • Parnas, H.1
  • 43
    • 0000786980 scopus 로고
    • mineralization and immobilization of soil nitrogen by microorganisms
    • Clark F.E., and Rosswall T. (Eds), Swedish Natural Science Research Council, Stockholm
    • Paul E.A., and Juma N.G. mineralization and immobilization of soil nitrogen by microorganisms. In: Clark F.E., and Rosswall T. (Eds). Terrestrial Nitrogen Cycles. Processes, Ecosystem Strategies and Management Impacts (1981), Swedish Natural Science Research Council, Stockholm 179-195
    • (1981) Terrestrial Nitrogen Cycles. Processes, Ecosystem Strategies and Management Impacts , pp. 179-195
    • Paul, E.A.1    Juma, N.G.2
  • 44
    • 0026158373 scopus 로고
    • Delay in lake recovery caused by internal loading
    • Rossi G., and Premazzi G. Delay in lake recovery caused by internal loading. Water Res. 25 (1991) 567-575
    • (1991) Water Res. , vol.25 , pp. 567-575
    • Rossi, G.1    Premazzi, G.2
  • 46
    • 0027451166 scopus 로고
    • The ecology of sediment bacteria in lakes and comparisons with other aquatic ecosystems
    • Schallenberg M., and Kalff J. The ecology of sediment bacteria in lakes and comparisons with other aquatic ecosystems. Ecology 74 (1993) 919-934
    • (1993) Ecology , vol.74 , pp. 919-934
    • Schallenberg, M.1    Kalff, J.2
  • 47
    • 0024506815 scopus 로고
    • Solutions to problems in enumerating sediment bacteria by direct counts
    • Schallenberg M., Kalff J., and Rasmussen J.B. Solutions to problems in enumerating sediment bacteria by direct counts. Appl. Environ. Microbiol. 55 (1989) 1214-1219
    • (1989) Appl. Environ. Microbiol. , vol.55 , pp. 1214-1219
    • Schallenberg, M.1    Kalff, J.2    Rasmussen, J.B.3
  • 49
    • 36049021612 scopus 로고    scopus 로고
    • Schultz, P., 2002. Incorporation of microbial biomass into a model of early diagenesis. Master's Thesis. Michigan Technological University, Houghton, MI.
  • 52
    • 0001670730 scopus 로고    scopus 로고
    • Dynamic response of deep-sea sediments to seasonal variations: a model
    • (1618 pp.)
    • Soetaert K., Herman P.M.J., and Middelburg J.J. Dynamic response of deep-sea sediments to seasonal variations: a model. Limnol. Oceanogr. 41 (1996) 1651 (1618 pp.)
    • (1996) Limnol. Oceanogr. , vol.41 , pp. 1651
    • Soetaert, K.1    Herman, P.M.J.2    Middelburg, J.J.3
  • 53
    • 0030921205 scopus 로고    scopus 로고
    • Trophic status and lake sedimentation fluxes
    • Tartari G., and Biasci G. Trophic status and lake sedimentation fluxes. Water Air Soil Pollut. 99 (1997) 523-531
    • (1997) Water Air Soil Pollut. , vol.99 , pp. 523-531
    • Tartari, G.1    Biasci, G.2
  • 54
    • 0025088150 scopus 로고
    • Bacterial regeneration of ammonium and phosphate as affected by the carbon:nitrogen:phosphorus ratio of organic substrates
    • Tezuka Y. Bacterial regeneration of ammonium and phosphate as affected by the carbon:nitrogen:phosphorus ratio of organic substrates. Microbiol. Ecol. 19 (1990) 227-238
    • (1990) Microbiol. Ecol. , vol.19 , pp. 227-238
    • Tezuka, Y.1
  • 56
    • 0029472982 scopus 로고
    • Benthic microbial response to a sedimentation event at low temperature in sediments of a eutrophic lake
    • Törnblom E., and Boström B. Benthic microbial response to a sedimentation event at low temperature in sediments of a eutrophic lake. Mar. Freshwater Res. 46 (1995) 33-43
    • (1995) Mar. Freshwater Res. , vol.46 , pp. 33-43
    • Törnblom, E.1    Boström, B.2
  • 57
    • 0025525723 scopus 로고
    • Amino acid and ammonium utilization by heterotrophic marine bacteria grown in enriched seawater
    • Tupas L., and Koike I. Amino acid and ammonium utilization by heterotrophic marine bacteria grown in enriched seawater. Limnol. Oceanogr. 35 (1990) 1145-1155
    • (1990) Limnol. Oceanogr. , vol.35 , pp. 1145-1155
    • Tupas, L.1    Koike, I.2
  • 58
    • 0000507377 scopus 로고
    • Simultaneous uptake and regeneration of ammonium by mixed assemblages of heterotrophic marine bacteria
    • Tupas L., and Koike I. Simultaneous uptake and regeneration of ammonium by mixed assemblages of heterotrophic marine bacteria. Mar. Ecol. Prog. Ser. 70 (1991) 273
    • (1991) Mar. Ecol. Prog. Ser. , vol.70 , pp. 273
    • Tupas, L.1    Koike, I.2
  • 59
    • 0030618787 scopus 로고    scopus 로고
    • Solute transfer across the sediment surface of a eutrophic lake. I. Porewater profiles from dialysis samplers
    • Urban N.R., Dinkel C., and Wehrli B. Solute transfer across the sediment surface of a eutrophic lake. I. Porewater profiles from dialysis samplers. Aquat. Sci. 59 (1997) 1-25
    • (1997) Aquat. Sci. , vol.59 , pp. 1-25
    • Urban, N.R.1    Dinkel, C.2    Wehrli, B.3
  • 60
    • 0029749173 scopus 로고    scopus 로고
    • Cycling of iron and manganese in surface sediments: a general theory for the coupled transport and reaction of carbon, oxygen, nitrogen, sulfur, iron, and manganese
    • Van Cappellen P., and Wang Y. Cycling of iron and manganese in surface sediments: a general theory for the coupled transport and reaction of carbon, oxygen, nitrogen, sulfur, iron, and manganese. Am. J. Sci. 296 (1996) 197-243
    • (1996) Am. J. Sci. , vol.296 , pp. 197-243
    • Van Cappellen, P.1    Wang, Y.2
  • 62
    • 0022608261 scopus 로고
    • Declining lake sediment phosphorus release and oxygen deficit following wastewater diversion
    • Welch E.B., Spyridakis D.E., Shuster J.I., and Horner R.R. Declining lake sediment phosphorus release and oxygen deficit following wastewater diversion. J. Water Pollut. Control Fed. 58 (1986) 92-96
    • (1986) J. Water Pollut. Control Fed. , vol.58 , pp. 92-96
    • Welch, E.B.1    Spyridakis, D.E.2    Shuster, J.I.3    Horner, R.R.4
  • 63
    • 0021554323 scopus 로고
    • The role of sedimentary organic matter in bacterial sulfate reduction: the G model tested
    • Westrich J.T., and Berner R.A. The role of sedimentary organic matter in bacterial sulfate reduction: the G model tested. Limnol. Oceanogr. 29 (1984) 236-249
    • (1984) Limnol. Oceanogr. , vol.29 , pp. 236-249
    • Westrich, J.T.1    Berner, R.A.2


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