Reconstitution of mitochondrial ATP synthase into lipid bilayers for structural analysis

Journal of Structural Biology

Volumn 160, Issue 3, 2007, Pages 287-294

  Arechaga, Ignacio ^a   Fotiadis, Dimitrios ^b  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b Biozentrum   (Switzerland)

Author keywords

2D Crystallization; Atomic force microscopy; ATP synthase; Membrane protein; Transmission electron microscopy

Indexed keywords

ADENOSINE TRIPHOSPHATE; DETERGENT; HISTIDINE; LIPID; MITOCHONDRIAL ENZYME; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATE SYNTHASE; RECOMBINANT ENZYME;

AEROBIC METABOLISM; ARTICLE; ATOMIC FORCE MICROSCOPY; ELECTRON MICROSCOPY; ENERGY; ENZYME ACTIVE SITE; ENZYME STRUCTURE; HEART MITOCHONDRION; LIPID BILAYER; MEMBRANE STRUCTURE; MONOLAYER CULTURE; NONHUMAN; PRIORITY JOURNAL; PROTEIN LIPID INTERACTION; PROTEOLIPOSOME;

ANIMALS; CATTLE; CRYSTALLIZATION; HISTIDINE; IMAGE PROCESSING, COMPUTER-ASSISTED; LIPID BILAYERS; MICROSCOPY, ATOMIC FORCE; MICROSCOPY, ELECTRON, TRANSMISSION; MITOCHONDRIA; MITOCHONDRIA, HEART; PROTEIN CONFORMATION; PROTEIN SUBUNITS; PROTEOLIPIDS; PROTON-TRANSLOCATING ATPASES; RECOMBINANT FUSION PROTEINS; SACCHAROMYCES CEREVISIAE PROTEINS;

BACTERIA (MICROORGANISMS); BOVINAE;

EID: 36048949714     PISSN: 10478477     EISSN: 10958657     Source Type: Journal    
DOI: 10.1016/j.jsb.2007.09.007     Document Type: Article

References (43)

1. Abrahams J.P., Leslie A.G., Lutter R., and Walker J.E. Structure at 2.8 Å resolution of F1-ATPase from bovine heart mitochondria. Nature 370 (1994) 621-628
2. Arechaga I., and Jones P.C. The rotor in the membrane of the ATP synthase and relatives. FEBS Lett. 494 (2001) 1-5
3. + ATP synthase from chloroplasts and its subcomplexes as revealed by electron microscopy. Biochim. Biophys. Acta 1458 (2000) 404-416
4. Boyer P.D. The ATP synthase--a splendid molecular machine. Annu. Rev. Biochem. 66 (1997) 717-749
5. Brisson A., Olofsson A., Ringler P., Schmutz M., and Stoylova S. Two-dimensional crystallization of proteins on planar lipid films and structure determination by electron crystallography. Biol. Cell 80 (1994) 221-228
6. Buchanan S.K., and Walker J.E. Large-scale chromatographic purification of F1F0-ATPase and complex I from bovine heart mitochondria. Biochem. J. 318 (1996) 343-349
7. Chiu W., Avila-Sakar A.J., and Schmid M.F. Electron crystallography of macromolecular periodic arrays on phospholipid monolayers. Adv. Biophys. 34 (1997) 161-172
8. Dickson V.K., Silvester J.A., Fearnley I.M., Leslie A.G., and Walker J.E. On the structure of the stator of the mitochondrial ATP synthase. EMBO J. 25 (2006) 2911-2918
9. Dimroth P.E., Wang H., Grabe M., and Oster G. Energy transduction in the sodium F-ATPase of Propionigenium modestum. Proc. Natl. Acad. Sci. USA 96 (1999) 4924-4929
10. Dubachev G.E., Lunev A.V., Barnakov A.N., Belogrudov G.I., Grinkevich V.A., and Demin V.V. Electron microscopy of two-dimensional crystals of mitochondrial ATP synthase. FEBS Lett. 336 (1993) 181-183
11. Elston T., Wang H., and Oster G. Energy transduction in ATP synthase. Nature 391 (1998) 510-513
12. Fillingame R.H. Identification of the dicyclohexylcarbodiimide-reactive protein component of the adenosine 5'-triphosphate energy-transducing system of Escherichia coli. J. Bacteriol. 124 (1975) 870-883
13. Gibbons C., Montgomery M.G., Leslie A.G., and Walker J.E. The structure of the central stalk in bovine F(1)-ATPase at 2.4 A resolution. Nat. Struct. Biol. 7 (2000) 1055-1061
14. Groth G., and Walker J.E. ATP synthase from bovine heart mitochondria: reconstitution into unilamellar phospholipid vesicles of the pure enzyme in a functional state. Biochem. J. 318 (1996) 351-357
15. Hutcheon M.L., Duncan T.M., Ngai H., and Cross R.L. Energy-driven subunit rotation at the interface between subunit a and the c oligomer in the Fo sector of Escherichia coli ATP synthase. Proc. Natl. Acad. Sci. USA 98 (2001) 8519-8524
16. Itoh H., Takahashi A., Adachi K., Noji H., Yasuda R., Yoshida M., and Kinosita Jr. K. Mechanically driven ATP synthesis by F1-ATPase. Nature 427 (2004) 465-468
17. Kaim G., Prummer M., Sick B., Zumofen G., Renn A., Wild U.P., and Dimroth P. Coupled rotation within single F0F1 enzyme complexes during ATP synthesis or hydrolysis. FEBS Lett. 525 (2002) 156-163
18. Jap B.K., Zulauf M., Scheybani T., Hefti A., Baumeister W., Aebi W., and Engel A. 2D crystallization: from art to science. Ultramicroscopy 46 (1992) 45-84
19. Junge W., Lille H., and Engelbrecht E. ATP synthase: an electrochemical transducer with rotary mechanics. Trends Biol. Sci. 22 (1997) 420-423
20. Kabaleesewaran V., Puri N., Walker J.E., Leslie A.G., and Mueller D.M. Novel features of the rotary catalytic mechanism revealed in the structure of yeast F1 ATPase. EMBO J. 25 (2006) 5433-5442
21. Karrasch S., and Walker J.E. Novel features in the structure of bovine ATP synthase. J. Mol. Biol. 290 (1999) 379-384
22. Kuhlbrandt W. Two-dimensional crystallization of membrane proteins. Q. Rev. Biophys 25 (1992) 1-49
23. Levy D., Mosser G., Lambert O., Moeck G.S., Bald D., and Rigaud J.L. Two-dimensional crystallization on lipid layer: A successful approach for membrane proteins. J. Struct. Biol. 127 (1999) 44-52
24. Levy D., Chami M., and Rigaud J.L. Two-dimensional crystallization of membrane proteins: the lipid layer strategy. FEBS Lett. 504 (2001) 187-193
25. Mueller D.M., Puri N., Kabaleeswaran V., Terry C., Leslie A.G., and Walker J.E. Ni-chelate-affinity purification and crystallization of the yeast mitochondrial F1-ATPase. Protein Expr. Purif. 37 (2004) 479-485
26. Muller D.J., Sapra K.T., Scheuring S., Kedrov A., Frederix P.L., Fotiadis D., and Engel A. Single-molecule studies of membrane proteins. Curr. Opin. Struct. Biol. 16 (2006) 489-495
27. Noji H., Yasuda R., Yoshida M., and Kinosita Jr. K. Direct observation of the rotation of F1-ATPase. Nature 386 (1997) 217-219
28. 1. FEBS Lett. 472 (2000) 34-38
29. Rastogi V.K., and Girvin M.E. Structural changes linked to proton translocation by subunit c of the ATP synthase. Nature 402 (1999) 263-268
30. Rigaud J.L., Mosser G., Lacapere J.J., Olofsson A., Levy D., and Ranck J.L. Bio-Beads: an efficient strategy for two-dimensional crystallization of membrane proteins. J. Struct. Biol. 118 (1997) 226-235
31. Rubinstein J.L., Walker J.E., and Henderson R. Structure of the mitochondrial ATP synthase by electron cryomicroscopy. EMBO J. 22 (2003) 6182-6192
32. 1): Direct Observation. Science 286 (1999) 1722-1724
33. Saxton W.O. Semper: Distortion Compensation, Selective Averaging, 3-D Reconstruction, and Transfer Function Correction in a Highly Programmable System. J. Struct. Biol. 116 (1996) 230-236
34. Stahlberg H., Fotiadis D., Scheuring S., Remigy H., Braun T., Mitsuoka K., Fujiyoshi Y., and Engel A. Two-dimensional crystals: a powerful approach to assess structure, function and dynamics of membrane proteins. FEBS Lett. 504 (2001) 166-172
35. Stock D., Gibbons C., Arechaga I., Leslie A.G., and Walker J.E. The rotary mechanism of ATP synthase. Curr. Opin. Struct. Biol. 10 (2000) 672-679
36. Stock D., Leslie A.G., and Walker J.E. Molecular architecture of the rotary motor in ATP synthase. Science 286 (1999) 1700-1705
37. Tsunoda S.P., Aggeler R., Yoshida M., and Capaldi R.A. Rotation of the c subunit oligomer in fully functional F1Fo ATP synthase. Proc. Natl. Acad. Sci. USA 98 (2001) 898-902
38. Ueno H., Suzuki T., Kinosita Jr. K., and Yoshida M. ATP-driven stepwise rotation of FoF1-ATP synthase. Proc. Natl. Acad. Sci. USA 102 (2005) 1333-1338
39. Yasuda R., Noji H., Kinosita Jr. K., and Yoshida M. F1-ATPase is a highly efficient molecular motor that rotates with discrete 120 degree steps. Cell 93 (1998) 1117-1124
40. Yasuda R., Noji H., Yoshida M., Kinosita Jr. K., and Itoh H. Resolution of distinct rotational substeps by submillisecond kinetic analysis of F1-ATPase. Nature 410 (2001) 898-904
41. Walker J.E. ATP synthesis by rotary catalysis (Nobel Lecture). Angew Chem. Int. Ed. Engl. 37 (1998) 2309-2319
42. Walker J.E., and Dickson V.K. The peripheral stalk of the mitochondrial ATP synthase. Biochim. Biophys. Acta 1757 (2006) 286-296
43. Walz T., Smith B.L., Zeidel M.L., Engel A., and Agre P. Biologically active two-dimensional crystals of aquaporin CHIP. J. Biol. Chem. 269 (1994) 1583-1586