Genetic diversity and reassortments among Akabane virus field isolates

Virus Research

Volumn 130, Issue 1-2, 2007, Pages 162-171

  Kobayashi, Takahiko ^a   Yanase, Tohru ^b   Yamakawa, Makoto ^b   Kato, Tomoko ^b   Yoshida, Kazuo ^b   Tsuda, Tomoyuki ^b  

^a KAKETSUKEN   (Japan)

^b NATIONAL INSTITUTE OF ANIMAL HEALTH   (Japan)

Author keywords

Arbovirus; Glycoprotein; Orthobunyavirus; Phylogeny; Reassortment

Indexed keywords

GLYCOPROTEIN;

AKABANE VIRUS; ARBOVIRUS; ARTICLE; CONTROLLED STUDY; GENE AMPLIFICATION; GENE SEQUENCE; GENETIC REASSORTMENT; GENETIC VARIABILITY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA ANALYSIS; VIRUS ISOLATION;

AEDES; ANIMALS; AUSTRALIA; BUNYAVIRIDAE INFECTIONS; CATTLE; CATTLE DISEASES; CERATOPOGONIDAE; CLUSTER ANALYSIS; JAPAN; KENYA; MOLECULAR SEQUENCE DATA; ORTHOBUNYAVIRUS; PHYLOGENY; REASSORTANT VIRUSES; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SEQUENCE HOMOLOGY, NUCLEIC ACID; TAIWAN; VARIATION (GENETICS);

AKABANE VIRUS; ARBOVIRUS; ORTHOBUNYAVIRUS; TINAROO VIRUS;

EID: 35748941250     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.virusres.2007.06.007     Document Type: Article

References (54)

1. Akashi H., Kaku Y., Kong X., and Pang H. Antigenic and genetic comparisons of Japanese and Australian Simbu serogroup viruses: evidence for the recovery of natural virus reassortants. Virus Res. 50 (1997) 205-213
2. Akashi H., Kaku Y., Kong X.G., and Pang H. Sequence determination and phylogenetic analysis of the Akabane bunyavirus S RNA genome segment. J. Gen. Virol. 78 (1997) 2847-2851
3. Akashi H., Onuma S., Nagano H., Ohta M., and Fukutomi T. Detection and differentiation of Aino and Akabane Simbu serogroup bunyaviruses by nested polymerase chain reaction. Arch. Virol. 144 (1999) 2101-2109
4. Al-Busaidy S.M., and Mellor P.S. Isolation and identification of arboviruses from the Sultanate of Oman. Epidemiol. Infect. 106 (1991) 403-413
5. Al-Busaidy S.M., Mellor P.S., and Taylor W.P. Prevalence of neutralising antibodies to Akabane virus in the Arabian peninsula. Vet. Microbiol. 17 (1988) 141-149
6. Aquino V.H., Moreli M.L., and Moraes Figueiredo L.T. Analysis of oropouche virus L protein amino acid sequence showed the presence of an additional conserved region that could harbour an important role for the polymerase activity. Arch. Virol. 148 (2003) 19-28
7. Barnard B.J. Antibodies against some viruses of domestic animals in southern African wild animals. Onderstepoort. J. Vet. Res. 64 (1997) 95-110
8. Brenner J., Tsuda T., Yadin H., and Kato T. Serological evidence of akabane virus infection in northern Israel in 2001. J. Vet. Med. Sci. 66 (2004) 441-443
9. Briese T., Bird B., Kapoor V., Nichol S.T., and Lipkin W.L. Batai and Ngari viruses: M segment reassortment and association with severe febrile disease outbreaks in East Africa. J. Virol. 80 (2006) 5627-5630
10. Bryant J.E., Crabtree M.B., Nam V.S., Yen N.T., Duc H.I.M., and Miller B.R. Isolation of arboviruses from mosquitoes collected in northern Vietnam. Am. J. Trop. Med. Hyg. 73 (2005) 470-473
11. Calisher C.H. History, classification, and taxonomy of viruses in the family Bunyaviridae. In: Elliott R.M. (Ed). The Bunyaviridae (1996), Plenum Press, New York 1-17
12. Cybinski D.H. Douglas and Tinaroo viruses: two Simbu group arboviruses infecting Culicoides brevitarsis and livestock in Australia. Aust. J. Biol. Sci. 37 (1974) 91-97
13. Cybinski D.H., St George T.D., and Paull N.I. Antibodies to Akabane virus in Australia. Aust. Vet. J. 54 (1978) 1-3
14. Davies F.G., and Jessett D.M. A study of the host range and distribution of antibody to Akabane virus (genus bunyavirus, family Bunyaviridae) in Kenya. J. Hyg. (Lond.) 95 (1985) 191-196
15. Drummond A.J., Ho S.Y., Phillips M.J., and Rambaut A. Relaxed phylogenetics and dating with confidence. PLoS. Biol. 4 (2006) e88
16. Drummond, A.J., Rambaut, A., 2006. BEAST v1.4. Available from http://beast.bio.ed.ac.uk/.html.
17. Fulhorst C.F., Bowen M.D., Hardy J.L., Eldridge B.F., Chiles R.E., Jackson A.O., and Reeves W.C. Geographic distribution and serologic and genomic characterization of Morro Bay virus, a newly recognized bunyavirus. Am. J. Trop. Med. Hyg. 54 (1996) 563-569
18. Gerrard S.R., Li L., Barrett A.D., and Nichol S.T. Ngari virus is a Bunyamwera virus reassortant that can be associated with large outbreaks of hemorrhagic fever in Africa. J. Virol. 78 (2004) 8922-8926
19. Haughey K.G., Hartley W.J., Della-Porta A.J., and Murray M.D. Akabane disease in sheep. Aust. Vet. J. 65 (1993) 136-140
20. Jagoe S., Kirkland P.D., and Harper P.A. An outbreak of Akabane virus-induced abnormalities in calves after agistment in an endemic region. Aust. Vet. J. 70 (1993) 56-58
21. Jennings M., and Mellor P.S. Culicoides: biological vectors of Akabane virus. Vet. Microbiol. 21 (1989) 125-131
22. Kurogi H., Akiba K., Inaba Y., and Matsumoto M. Isolation of Akabane virus from the biting midge Culicoides oxystoma in Japan. Vet. Microbiol. 15 (1987) 243-248
23. Kurogi H., Inaba Y., Goto Y., Miura Y., and Takahashi H. Serologic evidence for etiologic role of Akabane virus in epizootic abortion-arthrogryposis-hydranencephaly in cattle in Japan, 1972-1974. Arch. Virol. 47 (1975) 71-83
24. Kurogi H., Inaba Y., Takahashi E., Sato K., Akashi H., Satoda K., and Omori T. An attenuated strain of Akabane virus: a candidate for live virus vaccine. Natl. Inst. Anim. Health Q. (Tokyo) 19 (1979) 12-22
25. Kurogi H., Inaba Y., Takahashi E., Sato K., and Goto Y. Experimental infection of pregnant goats with Akabane virus. Natl. Inst. Anim. Health. Q. (Tokyo) 17 (1977) 1-9
26. Kurogi H., Inaba Y., Takahashi E., Sato K., Goto Y., Satoda K., Omori T., and Hatakeyama H. Development of inactivated vaccine for Akabane disease. Natl. Inst. Anim. Health Q. (Tokyo) 18 (1978) 97-108
27. Kurogi H., Inaba Y., Takahashi E., Sato K., Omori T., Miura Y., Goto Y., Fujiwara Y., Hatano Y., Kodama K., Fukuyama S., Sasaki N., and Matumoto M. Epizootic congenital arthrogryposis-hydranencephaly syndrome in cattle: isolation of Akabane virus from affected fetuses. Arch. Virol. 51 (1976) 67-74
28. Kurogi H., Inaba Y., Takahashi E., Sato K., and Satoda K. Congenital abnormalities in newborn calves after inoculation of pregnant cows with Akabane virus. Infect. Immun. 17 (1977) 338-343
29. Lee J.K., Park J.S., Choi J.H., Park B.K., Lee B.C., Hwang W.S., Kim J.H., Jean Y.H., Haritani M., Yoo H.S., and Kim D.Y. Encephalomyelitis associated with Akabane virus infection in adult cows. Vet. Pathol. 39 (2002) 269-273
30. Liao Y.K., Lu Y.S., Goto Y., and Inaba Y. The isolation of Akabane virus (Iriki strain) from calves in Taiwan. J. Basic Microbiol. 36 (1996) 33-39
31. Martin D.P., Williamson C., and Posada D. RDP2: recombination detection and analysis from sequence alignments. Bioinformatics 21 (2005) 260-262
32. Metselaar D., and Robin Y. Akabane virus isolated in Kenya. Vet. Rec. 99 (1976) 86
33. Miura Y., Inaba Y., Tsuda T., Tokuhisa S., Sato K., Akashi H., and Matumoto M. A survey of antibodies to arthropod-borne viruses in Indonesian cattle. Nippon Juigaku Zasshi 44 (1982) 857-863
34. Mohamed M.E., Mellor P.S., and Taylor W.P. Akabane virus: serological survey of antibodies in livestock in the Sudan. Rev. Elev. Med. Vet. Pays. Trop. 49 (1996) 285-288
35. Nichol S.T., Beaty B.J., Elliott R.M., Goldbach R., Plyusnin A., Schmaljohn C.S., and Tesh R.B. Family Bunyaviridae. In: Frauguet C.M., Mayo M.A., Maniloff J., Desselberger U., and Ball L.A. (Eds). Virus Taxonomy, Eighth report of International Committee on the Taxonomy of Viruses (2005), Elsevier Academic Press, San Diego 695-716
36. Oya A., Okuno T., Ogata T., Kobayashi I., and Matsuyama T. Akabane, a new arbor virus isolated in Japan. Jpn. J. Med. Sci. Biol. 14 (1961) 101-108
37. Page R.D.M. TreeView: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12 (1996) 357-358
38. Parsonson I.M., Della-Porta A.J., and McPhee D.A. Pathogenesis and virulence of Australian Simbu serogroup Bunyaviruses. In: McKenizie J.S. (Ed). Viral Diseases in South-East Asia and the Western Pacific (1982), Academic Press, Sydney 644-647
39. Parsonson I.M., Della-Porta A.J., and Snowdon W.A. Congenital abnormalities in newborn lambs after infection of pregnant sheep with Akabane virus. Infect. Immun. 15 (1977) 254-262
40. Pringle C.M. Genetic and genome segment reassortment. In: Elliott R.M. (Ed). The Bunyaviridae (1996), Plenum Press, New York 189-226
41. Purse B.V., Mellor P.S., Rogers D.J., Samuel A.R., Mertens P.P., and Baylis M. Climate change and the recent emergence of bluetongue in Europe. Nat. Rev. Microbiol. 3 (2005) 171-181
42. Rambaut, A., Drummond, A.J., 2004. Tracer v1.3. Available from http://evolve.zoo.ox.ac.uk/software.html.
43. Saeed M.F., Li L., Wang H., Weaver S.C., and Barrett A.D. Phylogeny of the Simbu serogroup of the genus Bunyavirus. J. Gen. Virol. 82 (2001) 2173-2181
44. Saitou N., and Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4 (1987) 406-425
45. Schneebeli M., Inoue S., and Madarame H. Hydranencephaly in newborn calves in Zambia. J. Vet. Med. Sci. 55 (1993) 515-517
46. Sellers R.F., and Pedgley D.E. Possible windborne spread to western Turkey of bluetongue virus in 1977 and of Akabane virus in 1979. J. Hyg. (Lond.) 95 (1985) 149-158
47. Shapiro B., Rambaut A., and Drummond A.J. Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences. Mol. Biol. Evol. 23 (2006) 7-9
48. Taylor W.P., and Mellor P.S. The distribution of Akabane virus in the Middle East. Epidemiol. Infect. 113 (1994) 175-185
49. Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22 (1994) 4673-4680
50. Tsuda T., Yoshida K., Yanase T., Ohashi S., and Yamakawa M. Competitive enzyme-linked immunosorbent assay for the detection of the antibodies specific to akabane virus. J. Vet. Diagn. Invest. 16 (2004) 571-576
51. Yamakawa M., Yanase T., Kato T., and Tsuda T. Chronological and geographical variations in the small RNA segment of the teratogenic Akabane virus. Virus Res. 121 (2006) 84-92
52. Yanase T., Kato T., Kubo T., Yoshida K., Ohashi S., Yamakawa M., Miura Y., and Tsuda T. Isolation of bovine arboviruses from Culicoides biting midges (Diptera: Ceratopogonidae) in southern Japan: 1985-2002. J. Med. Entomol. 42 (2005) 63-67
53. Yanase T., Yoshida K., Ohashi S., Kato T., and Tsuda T. Sequence analysis of the medium RNA segment of three Simbu serogroup viruses, Akabane, Aino, and Peaton viruses. Virus Res. 93 (2003) 63-69
54. Yoshida K., and Tsuda T. Rapid detection of antigenic diversity of Akabane virus isolates by dot immunobinding assay using neutralizing monoclonal antibodies. Clin. Diagn. Lab. Immunol. 5 (1998) 192-198