Proteins associated with the Myxococcus xanthus extracellular matrix

Journal of Bacteriology

Volumn 189, Issue 21, 2007, Pages 7634-7642

  Curtis, Patrick D ^a   Atwood III, James ^a   Orlando, Ron ^a   Shimkets, Lawrence J ^a  

^a UNIVERSITY OF GEORGIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DODECYL SULFATE SODIUM; PROTEOME; SCLEROPROTEIN;

ARTICLE; BIOFILM; EXTRACELLULAR MATRIX; FIBA GENE; GENE; GENE DISRUPTION; LIQUID CHROMATOGRAPHY; MXAN4860 GENE; MYXOCOCCUS XANTHUS; NONHUMAN; PILA GENE; PRIORITY JOURNAL; PROTEIN AGGREGATION; PROTEIN ANALYSIS; PROTEIN FUNCTION; PROTEIN PURIFICATION; PROTEIN SECRETION; SOLUBILIZATION; SPOROGENESIS; STRAIN IDENTIFICATION; TANDEM MASS SPECTROMETRY; WILD TYPE;

BACTERIAL PROTEINS; EXTRACELLULAR MATRIX; EXTRACELLULAR MATRIX PROTEINS; MYXOCOCCUS XANTHUS; SPORES, BACTERIAL;

MYXOCOCCUS XANTHUS; PILA;

EID: 35649022212     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.01007-07     Document Type: Article

References (60)

1. Arnold, J. W., and L. J. Shimkets. 1988. Cell surface properties correlated with cohesion in Myxococcus xanthus. J. Bacteriol. 170:5771-5777.
2. Arnold, J. W., and L. J. Shimkets. 1988. Inhibition of cell-cell interactions in Myxococcus xanthus by Congo red. J. Bacteriol. 170:5765-5770.
3. Behmlander, R. M., and M. Dworkin. 1994. Biochemical and structural analyses of the extracellular matrix fibrils of Myxococcus xanthus. J. Bacteriol. 176:6295-6303.
4. Behmlander, R. M., and M. Dworkin. 1991. Extracellular fibrils and contact-mediated cell interactions in Myxococcus xanthus. J. Bacteriol. 173:7810-7820.
5. Behmlander, R. M., and M. Dworkin. 1994. Integral proteins of the extracellular matrix fibrils of Myxococcus xanthus. J. Bacteriol. 176:6304-6311.
6. Bellenger, K., X. Ma, W. Shi, and Z. Yang. 2002. A CheW homologue is required for Myxococcus xanthus fruiting body development, social gliding motility, and fibril biogenesis. J. Bacteriol. 184:5654-5660.
7. Berger, W., D. van de Pol, M. Warburg, A. Gal, L. Bleeker-Wagemakers, H. de Silva, A. Meindl, T. Meitinger, F. Cremers, and H. H. Ropers. 1992. Mutations in the candidate gene for Norrie disease. Hum. Mol. Genet. 1:461-465.
8. Black, W. P., Q. Xu, and Z. Yang. 2006. Type IV pili function upstream of the Dif Chemotaxis pathway in Myxococcus xanthus EPS regulation. Mol. Microbiol. 61:447-456.
9. Black, W. P., and Z. Yang. 2004. Myxococcus xanthus chemotaxis homologs DifD and DifG negatively regulate fibril polysaccharide production. J. Bacteriol. 186:1001-1008.
10. Blom, A. B., P. L. van Lent, S. Libregts, A. E. Holthuysen, P. M. van der Kraan, N. van Rooijen, and W. B. van den Berg. 2007. Crucial role of macrophages in matrix metalloproteinase-mediated cartilage destruction during experimental osteoarthritis: involvement of matrix metalloproteinase 3. Arthritis Rheum. 56:147-157.
11. Bodet, C., F. Chandad, and D. Grenier. 2007. Inhibition of host extracellular matrix destructive enzyme production and activity by a high-molecular-weight cranberry fraction. J. Periodontal. Res. 42:159-168.
12. Bonner, P. J., W. P. Black, Z. Yang, and L. J. Shimkets. 2006. FibA and PilA act cooperatively during fruiting body formation of Myxococcus xanthus. Mol. Microbiol. 61:1283-1293.
13. Bonner, P. J., Q. Xu, W. P. Black, Z. Li, Z. Yang, and L. J. Shimkets. 2005. The Dif chemosensory pathway is directly involved in phosphatidylethanolamine sensory transduction in Myxococcus xanthus. Mol. Microbiol. 57:1499-1508.
14. Bradley, R. S., and A. M. Brown. 1990. The proto-oncogene int-1 encodes a secreted protein associated with the extracellular matrix. EMBO J. 9:1569-1575.
15. Branda, S. S., S. Vik, L. Friedman, and R. Kolter. 2005. Biofilms: the matrix revisited. Trends Microbiol. 13:20-26.
16. Campos, J. M., J. Geisselsoder, and D. R. Zusman. 1978. Isolation of bacteriophage MX4, a generalized transducing phage for Myxococcus xanthus. J. Mol. Biol. 119:167-178.
17. Chang, B. Y., and M. Dworkin. 1994. Isolated fibrils rescue cohesion and development in the Dsp mutant of Myxococcus xanthus. J. Bacteriol. 176:7190-7196.
18. Chang, B. Y., and M. Dworkin. 1996. Mutants of Myxococcus xanthus dsp defective in fibril binding. J. Bacteriol. 178:697-700.
19. Cong, F., L. Schweizer, and H. Varmus. 2004. Wnt signals across the plasma membrane to activate the beta-catenin pathway by forming oligomers containing its receptors, Frizzled and LRP. Development 131:5103-5115.
20. Curtis, P. D., R. Geyer, D. C. White, and L. J. Shimkets. 2006. Novel lipids in Myxococcus xanthus and their role in Chemotaxis. Environ. Microbiol. 8:1935-1949.
21. Davies, D. G., M. R. Parsek, J. P. Pearson, B. H. Iglewski, J. W. Costerton, and E. P. Greenberg. 1998. The involvement of cell-to-cell signals in the development of a bacterial biofilm. Science 280:295-298.
22. Domka, J., J. Lee, T. Bansal, and T. K. Wood. 2007. Temporal gene-expression in Escherichia coli K-12 biofilms. Environ. Microbiol. 9:332-346.
23. Goldman, B. S., W. C. Nierman, D. Kaiser, S. C. Slater, A. S. Durkin, J. A. Eisen, C. M. Ronning, W. B. Barbazuk, M. Blanchard, C. Field, C. Halling, G. Hinkle, O. Iartchuk, H. S. Kim, C. Mackenzie, R. Madupu, N. Miller, A. Shvartsbeyn, S. A. Sullivan, M. Vaudin, R. Wiegand, and H. B. Kaplan. 2006. Evolution of sensory complexity recorded in a myxobacterial genome. Proc. Natl. Acad. Sci. USA 103:15200-15205.
24. Gollop, R., M. Inouye, and S. Inouye. 1991. Protein U, a late-developmental spore coat protein of Myxococcus xanthus, is a secretory protein. J. Bacteriol. 173:3597-3600.
25. Grabellus, F., K. Worm, and K. W. Schmid. 2007. Induction of the matrix metalloproteinase-2 activation system in arteries by tensile stress. Involvement of the p38 MAP-kinase pathway. Pathol. Res. Pract. 203:135-143.
26. Juncker, A. S., H. Willenbrock, G. Von Heijne, S. Brunak, H. Nielsen, and A. Krogh. 2003. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Protein Sci. 12:1652-1662.
27. Kaiser, D. 1979. Social gliding is correlated with the presence of pili in Myxococcus xanthus. Proc. Natl. Acad. Sci. USA 76:5952-5956.
28. Kashefi, K., and P. L. Hartzell. 1995. Genetic suppression and phenotypic masking of a Myxococcus xanthus frzF - defect. Mol. Microbiol. 15:483-494.
29. Kearns, D. B., P. J. Bonner, D. R. Smith, and L. J. Shimkets. 2002. An extracellular matrix-associated zinc metalloprotease is required for dilauroyl phosphatidylethanolamine chemotactic excitation in Myxococcus xanthus. J. Bacteriol. 184:1678-1684.
30. Kearns, D. B., B. D. Campbell, and L. J. Shimkets. 2000. Myxococcus xanthus fibril appendages are essential for excitation by a phospholipid attractant. Proc. Natl. Acad. Sci. USA 97:11505-11510.
31. Kearns, D. B., A. Venot, P. J. Bonner, B. Stevens, G.-J. Boons, and L. J. Shimkets. 2001. Identification of a developmental chemoattractant in Myxococcus xanthus through metabolic engineering. Proc. Natl. Acad. Sci. USA 98:13990-13994.
32. Kurayoshi, M., H. Yamamoto, S. Izumi, and A. Kikuchi. 2007. Post-translational palmitoylation and glycosylation of Wnt-5a are necessary for its signalling. Biochem. J. 402:515-523.
33. Li, D. Q., and S. C. Pflugfelder. 2005. Matrix metalloproteinases in corneal inflammation. Ocul. Surf. 3:S198-S202.
34. Li, Y., R. Lux, A. E. Pelling, J. K. Gimzewski, and W. Shi. 2005. Analysis of type IV pilus and its associated motility in Myxococcus xanthus using an antibody reactive with native pilin and pili. Microbiology 151:353-360.
35. Li, Y., H. Sun, X. Ma, A. Lu, R. Lux, D. Zusman, and W. Shi. 2003. Extracellular polysaccharides mediate pilus retraction during social motility of Myxococcus xanthus. Proc. Natl. Acad. Sci. USA 100:5443-5448.
36. Lu, A., K. Cho, W. P. Black, X. Y. Duan, R. Lux, Z. Yang, H. B. Kaplan, D. R. Zusman, and W. Shi. 2005. Exopolysaccharide biosynthesis genes required for social motility in Myxococcus xanthus. Mol. Microbiol. 55:206-220.
37. Lund, L. R., J. Romer, T. H. Bugge, B. S. Nielsen, T. L. Frandsen, J. L. Degen, R. W. Stephens, and K. Dano. 1999. Functional overlap between two classes of matrix-degrading proteases in wound healing. EMBO J. 18:4645-4656.
38. Malik, M. T., and S. S. Kakar. 2006. Regulation of angiogenesis and invasion by human Pituitary tumor transforming gene (PTTG) through increased expression and secretion of matrix metalloproteinase-2 (MMP-2). Mol. Cancer 5:61.
39. Overall, C. M. 2002. Molecular determinants of metalloproteinase substrate specificity: matrix metalloproteinase substrate binding domains, modules, and exosites. Mol. Biotechnol. 22:51-86.
40. Pedrioli, P. G., J. K. Eng, R. Hubley, M. Vogelzang, E. W. Deutsch, B. Raught, B. Pratt, E. Nilsson, R. H. Angeletti, R. Apweiler, K. Cheung, C. E. Costello, H. Hermjakob, S. Huang, R. K. Julian, E. Kapp, M. E. McComb, S. G. Oliver, G. Omenn, N. W. Paton, R. Simpson, R. Smith, C. F. Taylor, W. Zhu, and R. Aebersold. 2004. A common open representation of mass spectrometry data and its application to proteomics research. Nat. Biotechnol. 22:1459-1466.
41. Poza, M., M. Prieto-Alcedo, C. Sieiro, and T. G. Villa. 2004. Cloning and expression of clt genes encoding milk-clotting proteases from Myxococcus xanthus 422. Appl. Environ. Microbiol. 70:6337-6341.
42. Quillet, L., L. Bensmail, S. Barray, and J. Guespin-Michel. 1997. Cloning and sequencing of two genes, prtA and prtB, from Myxococcus xanthus, encoding PrtA and PrtB proteases, both of which are required for the protease activity. Gene 198:135-140.
43. Reichsman, F., L. Smith, and S. Cumberledge. 1996. Glycosaminoglycans can modulate extracellular localization of the wingless protein and promote signal transduction. J. Cell Biol. 135:819-827.
44. Seydel, A., P. Gounon, and A. P. Pugsley. 1999. Testing the '+2 rule' for lipoprotein sorting in the Escherichia coli cell envelope with a new genetic selection. Mol. Microbiol. 34:810-821.
45. Shankavaram, U. T., W. C. Lai, S. Netzel-Arnett, P. R. Mangan, J. A. Ardans, N. Caterina, W. G. Stetler-Stevenson, H. Birkedal-Hansen, and L. M. Wahl. 2001. Monocyte membrane type 1-matrix metalloproteinase. Prostaglandin-dependent regulation and role in metalloproteinase-2 activation. J. Biol. Chem. 276:19027-19032.
46. Simunovic, V., F. C. Gherardini, and L. J. Shimkets. 2003. Membrane localization of motility, signaling, and polyketide synthetase proteins in Myxococcus xanthus. J. Bacteriol. 185:5066-5075.
47. Stanley, N. R., R. A. Britton, A. D. Grossman, and B. A. Lazazzera. 2003. Identification of catabolite repression as a physiological regulator of biofilm formation by Bacillus subtilis by use of DNA microarrays. J. Bacteriol. 185:1951-1957.
48. Sternlicht, M. D., and Z. Werb. 2001. How matrix metalloproteinases regulate cell behavior. Annu. Rev. Cell Dev. Biol. 17:463-516.
49. Sun, H., D. R. Zusman, and W. Shi. 2000. Type IV pilus of Myxococcus xanthus is a motility apparatus controlled by the frz chemosensory system. Curr. Biol. 10:1143-1146.
50. Sutherland, I. W. 2001. The biofilm matrix - an immobilized but dynamic microbial environment. Trends Microbiol. 9:222-227.
51. Tjaderhane, L., T. Hotakainen, S. Kinnunen, M. Ahonen, and T. Salo. 2007. The effect of chemical inhibition of matrix metalloproteinases on the size of experimentally induced apical periodontitis. Int. Endod. J. 40:282-289.
52. Vlamakis, H. C., J. R. Kirby, and D. R. Zusman. 2004. The Che4 pathway of Myxococcus xanthus regulates type IV pilus-mediated motility. Mol. Microbiol. 52:1799-1811.
53. Weatherly, D. B., J. A. Atwood, T. A. Minning, C. Cavola, R. L. Tarleton, and R. Orlando. 2005. A heuristic method for assigning a false-discovery rate for protein identifications from mascot database search results. Mol. Cell. Proteomics 4:762-772.
54. Whitchurch, C. B., T. Tolker-Nielsen, P. C. Ragas, and J. S. Mattick. 2002. Extracellular DNA required for bacterial biofilm formation. Science 295:1487.
55. Whiteley, M., M. G. Bangera, R. E. Bumgarner, M. R. Parsek, G. M. Teitzel, S. Lory, and E. P. Greenberg. 2001. Gene expression in Pseudomonas aeruginosa biofilms. Nature 413:860-864.
56. Wodarz, A., and R. Nusse. 1998. Mechanisms of Wnt signaling in development. Annu. Rev. Cell Dev. Biol. 14:59-88.
57. Wu, S. S., and D. Kaiser. 1996. Markerless deletions of pil genes in Myxococcus xanthus generated by counterselection with the Bacillus subtilis sacB gene. J. Bacteriol. 178:5817-5821.
58. Wu, S. S., J. Wu, and D. Kaiser. 1997. The Myxococcus xanthus pilT locus is required for social gliding motility although pili are still produced. Mol. Microbiol. 23:109-121.
59. Yang, Z., X. Ma, L. Tong, H. B. Kaplan, L. J. Shimkets, and W. Shi. 2000. Myxococcus xanthus dif genes are required for biogenesis of cell surface fibrils essential for social gliding motility. J. Bacteriol. 182:5793-5798.
60. Zaragoza, R., A. Gimeno, V. J. Miralles, E. R. Garcia-Trevijano, R. Carmena, C. Garcia, M. Mata, I. R. Puertes, L. Torres, and J. R. Vina. 2007. Retinoids induce MMP-9 expression through RARα during mammary gland remodeling. Am. J. Physiol. Endocrinol. Metab. 292:E1140-E1148.