Ycf12 is a core subunit in the photosystem II complex

Biochimica et Biophysica Acta - Bioenergetics

Volumn 1767, Issue 11, 2007, Pages 1269-1275

  Kashino, Yasuhiro ^a   Takahashi, Takeshi ^a   Inoue Kashino, Natsuko ^a,b   Ban, Akiko ^a   Ikeda, Yohei ^a   Satoh, Kazuhiko ^a   Sugiura, Miwa ^c  

^a UNIVERSITY OF HYOGO   (Japan)

^b OKAYAMA UNIVERSITY   (Japan)

^c Osaka Prefecture University   (Japan)

Author keywords

Low molecular weight polypeptide; Photosystem II; Psb30; Thermosynechococcus elongatus; ycf12

Indexed keywords

MEMBRANE PROTEIN; POLYPEPTIDE; PROTEIN; PROTEIN YCF12; UNCLASSIFIED DRUG;

AMINO TERMINAL SEQUENCE; ARTICLE; CHLOROPLAST; CONTROLLED STUDY; CRYSTALLOGRAPHY; CYANOBACTERIUM; ELECTROPHORESIS; FRAMESHIFT MUTATION; HYDROPHOBICITY; MOLECULAR MODEL; MOLECULAR WEIGHT; NONHUMAN; PHOTOSYSTEM II; PRIORITY JOURNAL; PROTEIN ANALYSIS; THERMOSYNECHOCOCCUS ELONGATUS;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; CRYSTALLIZATION; CYANOBACTERIA; ELECTROPHORESIS; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; PHOTOSYSTEM II PROTEIN COMPLEX; PROTEIN CONFORMATION; PROTEIN SUBUNITS; SEQUENCE HOMOLOGY, AMINO ACID;

CYANOBACTERIA; THERMOSYNECHOCOCCUS ELONGATUS;

EID: 35549004488     PISSN: 00052728     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbabio.2007.08.008     Document Type: Article

References (31)

1. Kamiya N., and Shen J.-R. Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-Å resolution. Proc. Natl. Acad. Sci. U. S. A. 100 (2003) 98-103
2. Ferreira K.N., Iverson T.M., Maghlaoui K., Barber J., and Iwata S. Architecture of the photosynthetic oxygen-evolving center. Science 303 (2004) 1831-1838
3. Loll B., Kern J., Saenger W., Zouni A., and Biesiadka J. Towards complete cofactor arrangement in the 3.0 Å resolution structure of photosystem II. Nature 438 (2005) 1040-1044
4. Kashino Y., Lauber W.M., Carroll J.A., Wang Q., Whitmarsh J., Satoh K., and Pakrasi H.B. Proteomic analysis of a highly active photosystem II preparation from the cyanobacterium Synechocystis sp. PCC 6803 reveals the presence of novel polypeptides. Biochemistry 41 (2002) 8004-8012
5. Thornton L.E., Roose J.L., and Pakrasi H.B. The low molecular weight proteins of photosystem II. In: Wydrzynski T.J., and Satoh K. (Eds). Photosystem II: The Light-Driven Water/Plastoquinone Oxidoreductase (2005), Kluwer Academic Publishers, Dordrecht, The Netherlands 121-138
6. Ikeuchi M., Eggers B., Shen G.Z., Webber A., Yu J.J., Hirano A., Inoue Y., and Vermaas W. Cloning of the psbK gene from Synechocystis sp. PCC 6803 and characterization of photosystem II in mutants lacking PSII-K. J. Biol. Chem. 266 (1991) 11111-11115
7. Ikeuchi M., Shukla V.K., Pakrasi H.B., and Inoue Y. Directed inactivation of the psbI gene does not affect photosystem II in the cyanobacterium Synechocystis sp. PCC 6803. Mol. Gen. Genet. 249 (1995) 622-628
8. Meetam M., Keren N., Ohad I., and Pakrasi H.B. The PsbY protein is not essential for oxygenic photosynthesis in the cyanobacterium Synechocystis sp. PCC 6803. Plant Physiol. 121 (1999) 1267-1272
9. Iwai M., Katoh H., Katayama M., and Ikeuchi M. PSII-Tc protein plays an important role in dimerization of photosystem II. Plant Cell Physiol. 45 (2004) 1809-1816
10. Neufeld S., Zinchenko V., Stephan D.P., Bader K.P., and Pistorius E.K. On the functional significance of the polypeptide PsbY for photosynthetic water oxidation in the cyanobacterium Synechocystis sp. strain PCC 6803. Mol. Genet. Genomics 271 (2004) 458-467
11. Funk C. Functional analysis of the PsbX protein by deletion of the corresponding gene in Synechocystis sp. PCC 6803. Plant Mol. Biol. 44 (2000) 815-827
12. Katoh H., and Ikeuchi M. Targeted disruption of psbX and biochemical characterization of photosystem II complex in the thermophilic cyanobacterium Synechococcus elongatus. Plant Cell Physiol. 42 (2001) 179-188
13. Schwenkert S., Umate P., Dal Bosco C., Volz S., Mlcochova L., Zoryan M., Eichacker L.A., Ohad I., Herrmann R.G., and Meurer J. PsbI affects the stability, function, and phosphorylation patterns of photosystem II assemblies in tobacco. J. Biol. Chem. 281 (2006) 34227-34238
14. Ohad I., Dal Bosco C., Herrmann R.G., and Meurer J. Photosystem II proteins PsbL and PsbJ regulate electron flow to the plastoquinone pool. Biochemistry 43 (2004) 2297-2308
15. Kashino Y., Koike H., Yoshio M., Egashira H., Ikeuchi M., Pakrasi H.B., and Satoh K. Low-molecular-mass polypeptide components of a photosystem II preparation from the thermophilic cyanobacterium Thermosynechococcus vulcanus. Plant Cell Physiol. 43 (2002) 1366-1373
16. Sugiura M., and Inoue Y. Highly purified thermo-stable oxygen-evolving photosystem II core complex from the thermophilic cyanobacterium Synechococcus elongatus having His-tagged CP43. Plant Cell Physiol. 40 (1999) 1219-1231
17. Kashino Y., Koike H., and Satoh K. An improved sodium dodecyl sulfate-polyacrylamide gel electrophoresis system for the analysis of membrane protein complexes. Electrophoresis 22 (2001) 1004-1007
18. Porra R.J., Thompson W.A., and Kriedemann P.E. Determination of accurate extinction coefficients and simultaneous equations for assaying chlorophylls a and b extracted with four different solvents: verification of the concentration of chlorophyll standards by atomic absorption spectroscopy. Biochim. Biophys. Acta 975 (1989) 384-394
19. Nakamura Y., Kaneko T., Sato S., Ikeuchi M., Katoh H., Sasamoto S., Watanabe A., Iriguchi M., Kawashima K., Kimura T., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Nakazaki N., Shinpo S., Sugimoto M., Takeuchi C., Yamada M., and T.S. Complete genome structure of the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1. DNA Res. 9 (2002) 123-130
20. Kashino Y. Separation methods in the analysis of protein membrane complexes. J. Chromatogr., B 797 (2003) 191-216
21. Seidler A. The extrinsic polypeptides of photosystem II. Biochim. Biophys. Acta 1277 (1996) 35-60
22. Jordan P., Fromme P., Witt H.T., Klukas O., Saenger W., and Krauss N. Three-dimensional structure of cyanobacterial photosystem I at 2.5 Å resolution. Nature 411 (2001) 909-917
23. 6f complex of oxygenic photosynthesis: tuning the cavity. Science 302 (2003) 1009-1014
24. Ke B. Photosynthesis: Photobiochemistry and Photobiophysics (2001), Kluwer, Dordrecht, The Netherland
25. Borodovsky M., and McIninch J. GeneMark: parallel gene recognition for both DNA strands. Comput. Chem. 17 (1993) 123-133
26. Swiatek M., Kuras R., Sokolenko A., Higgs D., Olive J., Cinque G., Muller B., Eichacker L.A., Stern D.B., Bassi R., Herrmann R.G., and Wollman F.A. The chloroplast gene ycf9 encodes a photosystem II (PSII) core subunit, PsbZ, that participates in PSII supramolecular architecture. Plant Cell 13 (2001) 1347-1367
27. Kyte J., and Doolittle R.F. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 157 (1982) 105-132
28. Goremykin V.V., Hirsch-Ernst K.I., Wolfl S., and Hellwig F.H. Analysis of the Amborella trichopoda chloroplast genome sequence suggests that Amborella is not a basal angiosperm. Mol. Biol. Evol. 20 (2003) 1499-1505
29. Berthold D.A., Babcock G.T., and Yocum C.F. A highly resolved, oxygen-evolving photosystem II preparation from spinach thylakoid membranes: EPR and electron-transport properties. FEBS Lett. 134 (1981) 231-234
30. B site. In: Murata N. (Ed). Research in Photosynthesis vol. II (1992), Kluwer, Dortrecht, the Netherlands 163-166
31. Hirokawa T., Boon-Chieng S., and Mitaku S. SOSUI: classification and secondary structure prediction system for membrane proteins. Bioinformatics 14 (1998) 378-379