Derivation of the shrinkage estimates of quantitative trait locus effects

Genetics

Volumn 177, Issue 2, 2007, Pages 1255-1258

  Xu, Shizhong ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BAYES THEOREM; GENE MAPPING; GENETIC ANALYSIS; PHENOTYPE; PRIORITY JOURNAL; QUANTITATIVE TRAIT LOCUS; UNIVARIATE ANALYSIS;

BAYES THEOREM; MODELS, THEORETICAL; NORMAL DISTRIBUTION; QUANTITATIVE TRAIT LOCI;

EID: 35549004413     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.107.077487     Document Type: Article

References (14)

1. BOX, G. E. P., and G. C. TIAO, 1973 Bayesian Inference in Statistical Analysis. Wiley & Sons, New York.
2. GELMAN, A., 2005 Analysis of variance-why it is more important than ever. Ann. Stat. 33: 1-53.
3. GELMAN, A., 2006 Prior distribution for variance parameters in hierarchical models. Bayesian Anal. 1: 515-533.
4. GEORGE, E. I., and R. E. MCMULLOCH, 1993 Variable selection via Gibbs sampling. J. Am. Stat. Assoc. 91: 883-904.
5. GIRI, N. C., 1996 Multivariate Statistical Analysis. Marcel Dekker, New York.
6. ISHWARAN, H., and J. S. RAO, 2005 Spike and slab variable selection: frequentist and Bayesian strategies. Ann. Stat. 33: 730-773.
7. LINDLEY, D. V., and A. F. M. SMITH, 1972 Bayes estimates for the linear model. J. R. Stat. Soc. Ser. B 34: 1-41.
8. ROBINSON, G. K., 1991 That BLUP is a good thing: the estimation of random effects. Stat. Sci. 6: 15-32.
9. TIBSHIRANI, R., 1996 Regression shrinkage and selection via the lasso. J. R. Stat. Soc. B 58: 267-288.
10. WANG, H., Y. M. ZHANG, X. LI, G. L. MASINDE, S. MOHAN et al., 2005 Bayesian shrinkage estimation of quantitative trait loci parameters. Genetics 170: 465-480.
11. XU, S., 2003 Estimating polygenic effects using markers of the entire genome. Genetics 163: 789-801.
12. XU, S., 2007 An empirical Bayes method for estimating epistatic effects of quantitative trait loci. Biometrics 63: 513-521.
13. YANG, R., and S. XU, 2007 Bayesian shrinkage analysis of quantitative trait loci for dynamic traits. Genetics 176: 1169-1185.
14. YI, N., V. GEORGE and D. B. ALLISON, 2003 Stochastic search variable selection for identifying quantitative trait loci. Genetics 164: 1129-1138.