메뉴 건너뛰기




Volumn 13, Issue 11, 2007, Pages 1940-1947

Saturation mutagenesis of a +1 programmed frameshift-inducing mRNA sequence derived from a yeast retrotransposon

Author keywords

Programmed frameshifting; Ribosome structure; Saccharomyces cerevisiae

Indexed keywords

MESSENGER RNA; RIBOSOME RNA; RNA 18S;

EID: 35548941390     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.735107     Document Type: Article
Times cited : (13)

References (71)
  • 1
    • 0020603594 scopus 로고
    • Ram ribosomes are defective proofreaders
    • Andersson, D.I. and Kurland, C.G. 1983. Ram ribosomes are defective proofreaders. Mol. Gen. Genet. 191: 378-381.
    • (1983) Mol. Gen. Genet , vol.191 , pp. 378-381
    • Andersson, D.I.1    Kurland, C.G.2
  • 2
    • 0025303605 scopus 로고
    • Ribosomal frameshifting in the yeast retrotransposon Ty: TRNAs induce slippage on a 7 nucleotide minimal site
    • Belcourt, M.F. and Farabaugh, P.J. 1990. Ribosomal frameshifting in the yeast retrotransposon Ty: tRNAs induce slippage on a 7 nucleotide minimal site. Cell 62: 339-352.
    • (1990) Cell , vol.62 , pp. 339-352
    • Belcourt, M.F.1    Farabaugh, P.J.2
  • 3
    • 0014912167 scopus 로고
    • Reversion of a streptomycin-dependent strain of Escherichia coli
    • Birge, E.A. and Kurland, C.G. 1970. Reversion of a streptomycin-dependent strain of Escherichia coli. Mol. Gen. Genet. 109: 356-369.
    • (1970) Mol. Gen. Genet , vol.109 , pp. 356-369
    • Birge, E.A.1    Kurland, C.G.2
  • 4
    • 0023748145 scopus 로고
    • Use of tRNA suppressors to probe regulation of Escherichia coli release factor 2
    • Curran, J. and Yarus, M. 1988. Use of tRNA suppressors to probe regulation of Escherichia coli release factor 2. J. Mol. Biol. 203: 75-83.
    • (1988) J. Mol. Biol , vol.203 , pp. 75-83
    • Curran, J.1    Yarus, M.2
  • 5
    • 0014915113 scopus 로고
    • Ribosomal proteins. XVI. Altered S4 proteins in Escherichia coli revertants from streptomycin dependence to independence
    • Deusser, E., Stoffler, G., and Wittmann, H.G. 1970. Ribosomal proteins. XVI. Altered S4 proteins in Escherichia coli revertants from streptomycin dependence to independence. Mol. Gen. Genet. 109: 298-302.
    • (1970) Mol. Gen. Genet , vol.109 , pp. 298-302
    • Deusser, E.1    Stoffler, G.2    Wittmann, H.G.3
  • 6
    • 0026681280 scopus 로고
    • Three widely separated positions in the 16S RNA lie in or close to the ribosomal decoding region: A site-directed cross-linking study with mRNA analogues
    • Dontsova, O., Dokudovskaya, S., Kopylov, A., Bogdanov, A., Rinke-Appel, J., Junke, N., and Brimacombe, R. 1992. Three widely separated positions in the 16S RNA lie in or close to the ribosomal decoding region: A site-directed cross-linking study with mRNA analogues. EMBO J. 11: 3105-3116.
    • (1992) EMBO J , vol.11 , pp. 3105-3116
    • Dontsova, O.1    Dokudovskaya, S.2    Kopylov, A.3    Bogdanov, A.4    Rinke-Appel, J.5    Junke, N.6    Brimacombe, R.7
  • 8
    • 0024325455 scopus 로고
    • Enhancer and silencerlike sites within the transcribed portion of a Ty2 transposable element of Saccharomyces cerevisiae
    • Farabaugh, P., Liao, X.-B., Belcourt, M., Zhao, H., Kapakos, J., and Clare, J. 1989. Enhancer and silencerlike sites within the transcribed portion of a Ty2 transposable element of Saccharomyces cerevisiae. Mol. Cell. Biol. 9: 4824-4834.
    • (1989) Mol. Cell. Biol , vol.9 , pp. 4824-4834
    • Farabaugh, P.1    Liao, X.-B.2    Belcourt, M.3    Zhao, H.4    Kapakos, J.5    Clare, J.6
  • 9
    • 0029870925 scopus 로고    scopus 로고
    • Programmed translational frameshifting
    • Farabaugh, P.J. 1996. Programmed translational frameshifting. Microbiol. Rev. 60: 103-134.
    • (1996) Microbiol. Rev , vol.60 , pp. 103-134
    • Farabaugh, P.J.1
  • 10
    • 0027250247 scopus 로고
    • A novel programed frameshift expresses the POL3 gene of retrotransposon Ty3 of yeast: Frameshifting without tRNA slippage
    • Farabaugh, P.J., Zhao, H., and Vimaladithan, A. 1993. A novel programed frameshift expresses the POL3 gene of retrotransposon Ty3 of yeast: Frameshifting without tRNA slippage. Cell 74: 93-103.
    • (1993) Cell , vol.74 , pp. 93-103
    • Farabaugh, P.J.1    Zhao, H.2    Vimaladithan, A.3
  • 11
    • 0030814332 scopus 로고    scopus 로고
    • Inferring the conformation of RNA base pairs and triples from patterns of sequence variation
    • doi: 10.1093/nar/25.8.1559
    • Gautheret, D. and Gutell, R.R. 1997. Inferring the conformation of RNA base pairs and triples from patterns of sequence variation. Nucleic Acids Res. 25: 1559-1564. doi: 10.1093/nar/25.8.1559.
    • (1997) Nucleic Acids Res , vol.25 , pp. 1559-1564
    • Gautheret, D.1    Gutell, R.R.2
  • 12
    • 0026667889 scopus 로고
    • Recoding: Reprogrammed genetic decoding
    • Gesteland, R., Weiss, R., and Atkins, J. 1992. Recoding: Reprogrammed genetic decoding. Science 257: 1640-1641.
    • (1992) Science , vol.257 , pp. 1640-1641
    • Gesteland, R.1    Weiss, R.2    Atkins, J.3
  • 14
    • 0026000339 scopus 로고
    • Mutations in 16S rRNA that affect UGA (stop codon)-directed translation termination
    • Goringer, H.U., Hijazi, K.A., Murgola, E.J., and Dahlberg, A.E. 1991. Mutations in 16S rRNA that affect UGA (stop codon)-directed translation termination. Proc. Natl. Acad. Sci. 88: 6603-6607.
    • (1991) Proc. Natl. Acad. Sci , vol.88 , pp. 6603-6607
    • Goringer, H.U.1    Hijazi, K.A.2    Murgola, E.J.3    Dahlberg, A.E.4
  • 15
    • 0002599277 scopus 로고
    • Streptomycin and misreading of the genetic code
    • eds. M. Nomura, et al, pp, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y
    • Gorini, L. 1974. Streptomycin and misreading of the genetic code. In Ribosomes. (eds. M. Nomura, et al.), pp. 791-803. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
    • (1974) Ribosomes , pp. 791-803
    • Gorini, L.1
  • 16
    • 0030970289 scopus 로고    scopus 로고
    • Ribosomes and translation
    • Green, R. and Noller, H.F. 1997. Ribosomes and translation. Annu. Rev. Biochem. 66: 679-716.
    • (1997) Annu. Rev. Biochem , vol.66 , pp. 679-716
    • Green, R.1    Noller, H.F.2
  • 17
    • 0842267211 scopus 로고    scopus 로고
    • Kinetic determinants of high-fidelity tRNA discrimination on the ribosome
    • Gromadski, K.B. and Rodnina, M.V. 2004. Kinetic determinants of high-fidelity tRNA discrimination on the ribosome. Mol. Cell 13: 191-200.
    • (2004) Mol. Cell , vol.13 , pp. 191-200
    • Gromadski, K.B.1    Rodnina, M.V.2
  • 18
    • 35548971503 scopus 로고    scopus 로고
    • Gutell, R.R. 1996. Comparative sequence analysis and the structure of 16S and 23S rRNA. In Structure, evolution, processing and function in protein biosynthesis. (eds. A.E. Dahlberg and R.A. Zimmermann), pp. 111-128. Ribosomal RNA, CRC Press, Boca Raton, FL.
    • Gutell, R.R. 1996. Comparative sequence analysis and the structure of 16S and 23S rRNA. In Structure, evolution, processing and function in protein biosynthesis. (eds. A.E. Dahlberg and R.A. Zimmermann), pp. 111-128. Ribosomal RNA, CRC Press, Boca Raton, FL.
  • 19
    • 0020959710 scopus 로고
    • Studies on transformation of Escherichia coli with plasmids
    • Hanahan, D. 1983. Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 166: 557-580.
    • (1983) J. Mol. Biol , vol.166 , pp. 557-580
    • Hanahan, D.1
  • 20
    • 0024039669 scopus 로고
    • Evolution of the secondary structures and compensatory mutations of the ribosomal RNAs of Drosophila melanogaster
    • Hancock, J.M., Tautz, D., and Dover, G.A. 1988. Evolution of the secondary structures and compensatory mutations of the ribosomal RNAs of Drosophila melanogaster. Mol. Biol. Evol. 5: 393-414.
    • (1988) Mol. Biol. Evol , vol.5 , pp. 393-414
    • Hancock, J.M.1    Tautz, D.2    Dover, G.A.3
  • 21
    • 0035107140 scopus 로고    scopus 로고
    • Yeast frameshift suppressor mutations in the genes coding for transcription factor Mbf1p and ribosomal protein S3: Evidence for autoregulation of S3 synthesis
    • Hendrick, J.L., Wilson, P.G., Edelman, I.I., Sandbaken, M.G., Ursic, D., and Culbertson, M.R. 2001. Yeast frameshift suppressor mutations in the genes coding for transcription factor Mbf1p and ribosomal protein S3: Evidence for autoregulation of S3 synthesis. Genetics 157: 1141-1158.
    • (2001) Genetics , vol.157 , pp. 1141-1158
    • Hendrick, J.L.1    Wilson, P.G.2    Edelman, I.I.3    Sandbaken, M.G.4    Ursic, D.5    Culbertson, M.R.6
  • 22
    • 0000359208 scopus 로고
    • Kinetic proofreading: A new mechanism for reducing errors in biosynthetic processes requiring high specificity
    • Hopfield, J. 1974. Kinetic proofreading: A new mechanism for reducing errors in biosynthetic processes requiring high specificity. Proc. Natl. Acad. Sci. 71: 4135-4139.
    • (1974) Proc. Natl. Acad. Sci , vol.71 , pp. 4135-4139
    • Hopfield, J.1
  • 24
    • 0020529962 scopus 로고
    • Transformation of intact yeast cells treated with alkali cations
    • Ito, H., Fukuda, Y., Murata, K., and Kimura, A. 1983. Transformation of intact yeast cells treated with alkali cations. J. Bacteriol. 153: 163-168.
    • (1983) J. Bacteriol , vol.153 , pp. 163-168
    • Ito, H.1    Fukuda, Y.2    Murata, K.3    Kimura, A.4
  • 25
    • 0029040550 scopus 로고
    • A second putative mRNA binding site on the Escherichia coli ribosome
    • Ivanov, I.G., Alexandrova, R.A., Dragulev, B.P., and AbouHaidar, M.G. 1995. A second putative mRNA binding site on the Escherichia coli ribosome. Gene 160: 75-79.
    • (1995) Gene , vol.160 , pp. 75-79
    • Ivanov, I.G.1    Alexandrova, R.A.2    Dragulev, B.P.3    AbouHaidar, M.G.4
  • 26
    • 0027373095 scopus 로고
    • A rare tRNA-Arg(CCU) that regulates Ty1 element ribosomal frameshifting is essential for Ty1 retrotransposition in Saccharomyces cerevisiae
    • Kawakami, K., Pande, S., Faiola, B., Moore, D.P., Boeke, J.D., Farabaugh, P.J., Strathern, J.N., Nakamura, Y., and Garfinkel, D.J. 1993. A rare tRNA-Arg(CCU) that regulates Ty1 element ribosomal frameshifting is essential for Ty1 retrotransposition in Saccharomyces cerevisiae. Genetics 135: 309-320.
    • (1993) Genetics , vol.135 , pp. 309-320
    • Kawakami, K.1    Pande, S.2    Faiola, B.3    Moore, D.P.4    Boeke, J.D.5    Farabaugh, P.J.6    Strathern, J.N.7    Nakamura, Y.8    Garfinkel, D.J.9
  • 27
    • 0033752611 scopus 로고    scopus 로고
    • Translation during cold adaptation does not involve mRNA-rRNA base pairing through the downstream box
    • La Teana, A., Brandi, A., O'Connor, M., Freddi, S., and Pon, C.L. 2000. Translation during cold adaptation does not involve mRNA-rRNA base pairing through the downstream box. RNA 6: 1393-1402.
    • (2000) RNA , vol.6 , pp. 1393-1402
    • La Teana, A.1    Brandi, A.2    O'Connor, M.3    Freddi, S.4    Pon, C.L.5
  • 29
    • 0032300804 scopus 로고    scopus 로고
    • Conserved geometrical basepairing patterns in RNA
    • Leontis, N.B. and Westhof, E. 1998. Conserved geometrical basepairing patterns in RNA. Q. Rev. Biophys. 31: 399-455.
    • (1998) Q. Rev. Biophys , vol.31 , pp. 399-455
    • Leontis, N.B.1    Westhof, E.2
  • 30
    • 0035256742 scopus 로고    scopus 로고
    • Programmed +1 frameshifting stimulated by complementarity between a downstream mRNA sequence and an error correcting region of rRNA
    • Li, Z., Stahl, G., and Farabaugh, P.J. 2001. Programmed +1 frameshifting stimulated by complementarity between a downstream mRNA sequence and an error correcting region of rRNA. RNA 7: 275-284.
    • (2001) RNA , vol.7 , pp. 275-284
    • Li, Z.1    Stahl, G.2    Farabaugh, P.J.3
  • 31
    • 0027988206 scopus 로고
    • Mutations in helix 34 of Escherichia coli 16 S ribosomal RNA have multiple effects on ribosome function and synthesis
    • Moine, H. and Dahlberg, A.E. 1994. Mutations in helix 34 of Escherichia coli 16 S ribosomal RNA have multiple effects on ribosome function and synthesis. J. Mol. Biol. 243: 402-412.
    • (1994) J. Mol. Biol , vol.243 , pp. 402-412
    • Moine, H.1    Dahlberg, A.E.2
  • 32
    • 0035026057 scopus 로고    scopus 로고
    • Evidence against an Interaction between the mRNA downstream box and 16S rRNA in translation initiation
    • Moll, I., Huber, M., Grill, S., Sairafi, P., Mueller, F., Brimacombe, R., Londei, P., and Blasi, U. 2001. Evidence against an Interaction between the mRNA downstream box and 16S rRNA in translation initiation. J. Bacteriol. 183: 3499-3505.
    • (2001) J. Bacteriol , vol.183 , pp. 3499-3505
    • Moll, I.1    Huber, M.2    Grill, S.3    Sairafi, P.4    Mueller, F.5    Brimacombe, R.6    Londei, P.7    Blasi, U.8
  • 33
    • 0842267214 scopus 로고    scopus 로고
    • Reprogrammed genetic decoding in cellular gene expression
    • Namy, O., Rousset, J.P., Napthine, S., and Brierley, I. 2004. Reprogrammed genetic decoding in cellular gene expression. Mol. Cell 13: 157-168.
    • (2004) Mol. Cell , vol.13 , pp. 157-168
    • Namy, O.1    Rousset, J.P.2    Napthine, S.3    Brierley, I.4
  • 34
    • 20444490272 scopus 로고    scopus 로고
    • Elongation factors on the ribosome
    • Nilsson, J. and Nissen, P. 2005. Elongation factors on the ribosome. Curr. Opin. Struct. Biol. 15: 349-354.
    • (2005) Curr. Opin. Struct. Biol , vol.15 , pp. 349-354
    • Nilsson, J.1    Nissen, P.2
  • 35
    • 0016793283 scopus 로고
    • Kinetic amplification of enzyme discrimination
    • Ninio, J. 1975. Kinetic amplification of enzyme discrimination. Biochimie 57: 587-595.
    • (1975) Biochimie , vol.57 , pp. 587-595
    • Ninio, J.1
  • 37
    • 0030763966 scopus 로고    scopus 로고
    • Decoding fidelity at the ribosomal A and P sites: Influence of mutations in three different regions of the decoding domain in 16S rRNA
    • doi: 10.1093/nar/25.6.1185
    • O'Connor, M., Thomas, C.L., Zimmermann, R.A., and Dahlberg, A.E. 1997. Decoding fidelity at the ribosomal A and P sites: Influence of mutations in three different regions of the decoding domain in 16S rRNA. Nucleic Acids Res. 25: 1185-1193. doi: 10.1093/nar/25.6.1185.
    • (1997) Nucleic Acids Res , vol.25 , pp. 1185-1193
    • O'Connor, M.1    Thomas, C.L.2    Zimmermann, R.A.3    Dahlberg, A.E.4
  • 38
    • 0033529890 scopus 로고    scopus 로고
    • Enhancement of translation by the downstream box does not involve base pairing of mRNA with the penultimate stem sequence of 16S rRNA
    • O'Connor, M., Asai, T., Squires, C.L., and Dahlberg, A.E. 1999. Enhancement of translation by the downstream box does not involve base pairing of mRNA with the penultimate stem sequence of 16S rRNA. Proc. Natl. Acad. Sci. 96: 8973-8978.
    • (1999) Proc. Natl. Acad. Sci , vol.96 , pp. 8973-8978
    • O'Connor, M.1    Asai, T.2    Squires, C.L.3    Dahlberg, A.E.4
  • 39
    • 0038403669 scopus 로고    scopus 로고
    • Insights into the decoding mechanism from recent ribosome structures
    • Ogle, J.M., Carter, A.P., and Ramakrishnan, V. 2003. Insights into the decoding mechanism from recent ribosome structures. Trends Biochem. Sci. 28: 259-266.
    • (2003) Trends Biochem. Sci , vol.28 , pp. 259-266
    • Ogle, J.M.1    Carter, A.P.2    Ramakrishnan, V.3
  • 40
    • 0024359013 scopus 로고
    • A novel sequence element derived from bacteriophage T7 mRNA acts as an enhancer of translation of the lacZ gene in Escherichia coli
    • Olins, P.O. and Rangwala, S.H. 1989. A novel sequence element derived from bacteriophage T7 mRNA acts as an enhancer of translation of the lacZ gene in Escherichia coli. J. Biol. Chem. 264: 16973-16976.
    • (1989) J. Biol. Chem , vol.264 , pp. 16973-16976
    • Olins, P.O.1    Rangwala, S.H.2
  • 41
    • 0028936155 scopus 로고
    • Pulling the ribosome out of frame +1 at a programmed frameshift site by cognate binding of aminoacyl-tRNA
    • Pande, S., Vimaladithan, A., Zhao, H., and Farabaugh, P.J. 1995. Pulling the ribosome out of frame +1 at a programmed frameshift site by cognate binding of aminoacyl-tRNA. Mol. Cell. Biol. 15: 298-304.
    • (1995) Mol. Cell. Biol , vol.15 , pp. 298-304
    • Pande, S.1    Vimaladithan, A.2    Zhao, H.3    Farabaugh, P.J.4
  • 42
    • 0024722501 scopus 로고
    • Errors and alternatives in reading the universal genetic code
    • Parker, J. 1989. Errors and alternatives in reading the universal genetic code. Microbiol. Rev. 53: 273-298.
    • (1989) Microbiol. Rev , vol.53 , pp. 273-298
    • Parker, J.1
  • 43
    • 0023663370 scopus 로고
    • Recognition of the TACTAAC box during mRNA splicing in yeast involves base pairing to the U2-like snRNA
    • Parker, R., Siliciano, P.G., and Guthrie, C. 1987. Recognition of the TACTAAC box during mRNA splicing in yeast involves base pairing to the U2-like snRNA. Cell 49: 229-239.
    • (1987) Cell , vol.49 , pp. 229-239
    • Parker, R.1    Siliciano, P.G.2    Guthrie, C.3
  • 44
    • 0025012472 scopus 로고
    • Dominant lethal mutations in a conserved loop in 16S rRNA
    • Powers, T. and Noller, H.F. 1990. Dominant lethal mutations in a conserved loop in 16S rRNA. Proc. Natl. Acad. Sci. 87: 1042-1046.
    • (1990) Proc. Natl. Acad. Sci , vol.87 , pp. 1042-1046
    • Powers, T.1    Noller, H.F.2
  • 45
    • 0029811326 scopus 로고    scopus 로고
    • Downstream boxanti-downstream box interactions are dispensable for translation initiation of leaderless mRNAs
    • Resch, A., Tedin, K., Grundling, A., Mundlein, A., and Blasi, U. 1996. Downstream boxanti-downstream box interactions are dispensable for translation initiation of leaderless mRNAs. EMBO J. 15: 4740-4748.
    • (1996) EMBO J , vol.15 , pp. 4740-4748
    • Resch, A.1    Tedin, K.2    Grundling, A.3    Mundlein, A.4    Blasi, U.5
  • 46
    • 0027214113 scopus 로고
    • Site-directed cross-linking of mRNA analogues to 16S ribosomal RNA; a complete scan of cross-links from all positions between "+1" and "+16" on the mRNA, downstream from the decoding site
    • doi: 10.1093/nar/21.12. 2853
    • Rinke-Appel, J., Junke, N., Brimacombe, R., Dukudovskaya, S., Dontsova, O., and Bogdanov, A. 1993. Site-directed cross-linking of mRNA analogues to 16S ribosomal RNA; a complete scan of cross-links from all positions between "+1" and "+16" on the mRNA, downstream from the decoding site. Nucleic Acids Res. 21: 2853-2859. doi: 10.1093/nar/21.12. 2853.
    • (1993) Nucleic Acids Res , vol.21 , pp. 2853-2859
    • Rinke-Appel, J.1    Junke, N.2    Brimacombe, R.3    Dukudovskaya, S.4    Dontsova, O.5    Bogdanov, A.6
  • 47
    • 14544285163 scopus 로고    scopus 로고
    • Recognition and selection of tRNA in translation
    • Rodnina, M.V., Gromadski, K.B., Kothe, U., and Wieden, H.J. 2005. Recognition and selection of tRNA in translation. FEBS Lett. 579: 938-942.
    • (2005) FEBS Lett , vol.579 , pp. 938-942
    • Rodnina, M.V.1    Gromadski, K.B.2    Kothe, U.3    Wieden, H.J.4
  • 48
    • 4243732080 scopus 로고
    • The 530 loop of 16S ribosomal RNA: Each base change confers its own phenotype
    • Santer, U., Cekleniak, J., and Santer, M. 1993. The 530 loop of 16S ribosomal RNA: Each base change confers its own phenotype. Mol. Biol. Cell 4: 420a.
    • (1993) Mol. Biol. Cell , vol.4
    • Santer, U.1    Cekleniak, J.2    Santer, M.3
  • 49
    • 0023042748 scopus 로고
    • Compensatory mutations suggest that base-pairing with a small nuclear RNA is required to form the 3′ end of H3 messenger RNA
    • Schaufele, F., Gilmartin, G.M., Bannwarth, W., and Birnstiel, M.L. 1986. Compensatory mutations suggest that base-pairing with a small nuclear RNA is required to form the 3′ end of H3 messenger RNA. Nature 323: 777-781.
    • (1986) Nature , vol.323 , pp. 777-781
    • Schaufele, F.1    Gilmartin, G.M.2    Bannwarth, W.3    Birnstiel, M.L.4
  • 52
    • 0016154301 scopus 로고
    • The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to nonsense triplets and ribosome binding sites
    • Shine, J. and Dalgarno, L. 1974. The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to nonsense triplets and ribosome binding sites. Proc. Natl. Acad. Sci. 71: 1342-1346.
    • (1974) Proc. Natl. Acad. Sci , vol.71 , pp. 1342-1346
    • Shine, J.1    Dalgarno, L.2
  • 53
    • 0035798380 scopus 로고    scopus 로고
    • Structure of the 80S ribosome from Saccharomyces cerevisiae-tRNA-ribosome and subunitsubunit interactions
    • Spahn, C.M., Beckmann, R., Eswar, N., Penczek, P.A., Sali, A., Blobel, G., and Frank, J. 2001. Structure of the 80S ribosome from Saccharomyces cerevisiae-tRNA-ribosome and subunitsubunit interactions. Cell 107: 373-386.
    • (2001) Cell , vol.107 , pp. 373-386
    • Spahn, C.M.1    Beckmann, R.2    Eswar, N.3    Penczek, P.A.4    Sali, A.5    Blobel, G.6    Frank, J.7
  • 55
    • 0036534459 scopus 로고    scopus 로고
    • Ribosome structure: Revisiting the connection between translational accuracy and unconventional decoding
    • Stahl, G., McCarty, G.P., and Farabaugh, P.J. 2002. Ribosome structure: Revisiting the connection between translational accuracy and unconventional decoding. Trends Biochem. Sci. 27: 178-183.
    • (2002) Trends Biochem. Sci , vol.27 , pp. 178-183
    • Stahl, G.1    McCarty, G.P.2    Farabaugh, P.J.3
  • 57
    • 0014993118 scopus 로고
    • Ribosomal proteins. XIX. Altered S5 ribosomal protein in an Escherichia coli revertant from streptomycin dependence to independence
    • Stoffler, G., Deusser, E., Wittmann, H.G., and Apirion, D. 1971. Ribosomal proteins. XIX. Altered S5 ribosomal protein in an Escherichia coli revertant from streptomycin dependence to independence. Mol. Gen. Genet. 111: 334-341.
    • (1971) Mol. Gen. Genet , vol.111 , pp. 334-341
    • Stoffler, G.1    Deusser, E.2    Wittmann, H.G.3    Apirion, D.4
  • 58
    • 0033380022 scopus 로고    scopus 로고
    • Nearcognate peptidyl-tRNAs promote +1 programmed translational frameshifting in yeast
    • Sundararajan, A., Michaud, W.A., Qian, Q., Stahl, G., and Farabaugh, P.J. 1999. Nearcognate peptidyl-tRNAs promote +1 programmed translational frameshifting in yeast. Mol. Cell 4: 1005-1015.
    • (1999) Mol. Cell , vol.4 , pp. 1005-1015
    • Sundararajan, A.1    Michaud, W.A.2    Qian, Q.3    Stahl, G.4    Farabaugh, P.J.5
  • 59
    • 11844292767 scopus 로고    scopus 로고
    • mRNA helicase activity of the ribosome
    • Takyar, S., Hickerson, R.P., and Noller, H.F. 2005. mRNA helicase activity of the ribosome. Cell 120: 49-58.
    • (2005) Cell , vol.120 , pp. 49-58
    • Takyar, S.1    Hickerson, R.P.2    Noller, H.F.3
  • 60
    • 33947711963 scopus 로고    scopus 로고
    • An mRNA sequence derived from the yeast EST3 gene stimulates programmed +1 translational frameshifting
    • Taliaferro, D. and Farabaugh, P.J. 2007a. An mRNA sequence derived from the yeast EST3 gene stimulates programmed +1 translational frameshifting. RNA 13: 606-613.
    • (2007) RNA , vol.13 , pp. 606-613
    • Taliaferro, D.1    Farabaugh, P.J.2
  • 61
    • 34447525137 scopus 로고    scopus 로고
    • Testing constraints on rRNA bases that make nonsequence-specific contacts with the codonanticodon complex in the ribosomal A site
    • Taliaferro, D. and Farabaugh, P.J. 2007b. Testing constraints on rRNA bases that make nonsequence-specific contacts with the codonanticodon complex in the ribosomal A site. RNA 13: 1279-1286.
    • (2007) RNA , vol.13 , pp. 1279-1286
    • Taliaferro, D.1    Farabaugh, P.J.2
  • 62
    • 0024598211 scopus 로고
    • An additional ribosomebinding site on mRNA of highly expressed genes and a bifunctional site on the colicin fragment of 16S rRNA from Escherichia coli: Important determinants of the efficiency of translationinitiation
    • Thanaraj, T.A. and Pandit, M.W. 1989. An additional ribosomebinding site on mRNA of highly expressed genes and a bifunctional site on the colicin fragment of 16S rRNA from Escherichia coli: Important determinants of the efficiency of translationinitiation. Nucleic Acids Res. 17: 2973-2985.
    • (1989) Nucleic Acids Res , vol.17 , pp. 2973-2985
    • Thanaraj, T.A.1    Pandit, M.W.2
  • 63
    • 0023977682 scopus 로고
    • EFTu provides an internal kinetic standard for translational accuracy
    • Thompson, R. 1988. EFTu provides an internal kinetic standard for translational accuracy. Trends Biochem. Sci. 13: 91-93.
    • (1988) Trends Biochem. Sci , vol.13 , pp. 91-93
    • Thompson, R.1
  • 64
    • 0019395516 scopus 로고
    • 2+ concentration, polyamines, streptomycin, and mutations in ribosomal proteins on the accuracy of the two-step selection of aminoacyl-tRNAs in protein biosynthesis
    • 2+ concentration, polyamines, streptomycin, and mutations in ribosomal proteins on the accuracy of the two-step selection of aminoacyl-tRNAs in protein biosynthesis. J. Biol. Chem. 256: 6676-6681.
    • (1981) J. Biol. Chem , vol.256 , pp. 6676-6681
    • Thompson, R.C.1    Dix, D.B.2    Gerson, R.B.3    Karim, A.M.4
  • 65
    • 0032514674 scopus 로고    scopus 로고
    • rRNA complementarity within mRNAs: A possible basis for mRNA-ribosome interactions and translational control
    • Tranque, P., Hu, M.C., Edelman, G.M., and Mauro, V.P. 1998. rRNA complementarity within mRNAs: A possible basis for mRNA-ribosome interactions and translational control. Proc. Natl. Acad. Sci. 95: 12238-12243.
    • (1998) Proc. Natl. Acad. Sci , vol.95 , pp. 12238-12243
    • Tranque, P.1    Hu, M.C.2    Edelman, G.M.3    Mauro, V.P.4
  • 66
    • 0024004922 scopus 로고
    • Reading frame switch caused by base-pair formation between the 3′ end of 16S rRNA and the mRNA during elongation of protein synthesis in Escherichia coli
    • Weiss, R., Dunn, D., Dahlberg, A., Atkins, J., and Gesteland, R. 1988. Reading frame switch caused by base-pair formation between the 3′ end of 16S rRNA and the mRNA during elongation of protein synthesis in Escherichia coli. EMBO J. 7: 1503-1507.
    • (1988) EMBO J , vol.7 , pp. 1503-1507
    • Weiss, R.1    Dunn, D.2    Dahlberg, A.3    Atkins, J.4    Gesteland, R.5
  • 67
    • 0034653488 scopus 로고    scopus 로고
    • RNA folding: Beyond Watson-Crick pairs
    • Westhof, E. and Fritsch, V. 2000. RNA folding: Beyond Watson-Crick pairs. Struct. Fold. Des. 8: R55-R65.
    • (2000) Struct. Fold. Des , vol.8
    • Westhof, E.1    Fritsch, V.2
  • 69
    • 0035958587 scopus 로고    scopus 로고
    • The path of messenger RNA through the ribosome
    • Yusupova, G.Z., Yusupov, M.M., Cate, J.H., and Noller, H.F. 2001. The path of messenger RNA through the ribosome. Cell 106: 233-241.
    • (2001) Cell , vol.106 , pp. 233-241
    • Yusupova, G.Z.1    Yusupov, M.M.2    Cate, J.H.3    Noller, H.F.4
  • 70
    • 33751103912 scopus 로고    scopus 로고
    • Structural basis for messenger RNA movement on the ribosome
    • Yusupova, G., Jenner, L., Rees, B., Moras, D., and Yusupov, M. 2006. Structural basis for messenger RNA movement on the ribosome. Nature 444: 391-394.
    • (2006) Nature , vol.444 , pp. 391-394
    • Yusupova, G.1    Jenner, L.2    Rees, B.3    Moras, D.4    Yusupov, M.5
  • 71
    • 0022550119 scopus 로고
    • A compensatory base change in U1 snRNA suppresses a 5′ splice site mutation
    • Zhuang, Y. and Weiner, A.M. 1986. A compensatory base change in U1 snRNA suppresses a 5′ splice site mutation. Cell 46: 827-835.
    • (1986) Cell , vol.46 , pp. 827-835
    • Zhuang, Y.1    Weiner, A.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.