-
1
-
-
0020603594
-
Ram ribosomes are defective proofreaders
-
Andersson, D.I. and Kurland, C.G. 1983. Ram ribosomes are defective proofreaders. Mol. Gen. Genet. 191: 378-381.
-
(1983)
Mol. Gen. Genet
, vol.191
, pp. 378-381
-
-
Andersson, D.I.1
Kurland, C.G.2
-
2
-
-
0025303605
-
Ribosomal frameshifting in the yeast retrotransposon Ty: TRNAs induce slippage on a 7 nucleotide minimal site
-
Belcourt, M.F. and Farabaugh, P.J. 1990. Ribosomal frameshifting in the yeast retrotransposon Ty: tRNAs induce slippage on a 7 nucleotide minimal site. Cell 62: 339-352.
-
(1990)
Cell
, vol.62
, pp. 339-352
-
-
Belcourt, M.F.1
Farabaugh, P.J.2
-
3
-
-
0014912167
-
Reversion of a streptomycin-dependent strain of Escherichia coli
-
Birge, E.A. and Kurland, C.G. 1970. Reversion of a streptomycin-dependent strain of Escherichia coli. Mol. Gen. Genet. 109: 356-369.
-
(1970)
Mol. Gen. Genet
, vol.109
, pp. 356-369
-
-
Birge, E.A.1
Kurland, C.G.2
-
4
-
-
0023748145
-
Use of tRNA suppressors to probe regulation of Escherichia coli release factor 2
-
Curran, J. and Yarus, M. 1988. Use of tRNA suppressors to probe regulation of Escherichia coli release factor 2. J. Mol. Biol. 203: 75-83.
-
(1988)
J. Mol. Biol
, vol.203
, pp. 75-83
-
-
Curran, J.1
Yarus, M.2
-
5
-
-
0014915113
-
Ribosomal proteins. XVI. Altered S4 proteins in Escherichia coli revertants from streptomycin dependence to independence
-
Deusser, E., Stoffler, G., and Wittmann, H.G. 1970. Ribosomal proteins. XVI. Altered S4 proteins in Escherichia coli revertants from streptomycin dependence to independence. Mol. Gen. Genet. 109: 298-302.
-
(1970)
Mol. Gen. Genet
, vol.109
, pp. 298-302
-
-
Deusser, E.1
Stoffler, G.2
Wittmann, H.G.3
-
6
-
-
0026681280
-
Three widely separated positions in the 16S RNA lie in or close to the ribosomal decoding region: A site-directed cross-linking study with mRNA analogues
-
Dontsova, O., Dokudovskaya, S., Kopylov, A., Bogdanov, A., Rinke-Appel, J., Junke, N., and Brimacombe, R. 1992. Three widely separated positions in the 16S RNA lie in or close to the ribosomal decoding region: A site-directed cross-linking study with mRNA analogues. EMBO J. 11: 3105-3116.
-
(1992)
EMBO J
, vol.11
, pp. 3105-3116
-
-
Dontsova, O.1
Dokudovskaya, S.2
Kopylov, A.3
Bogdanov, A.4
Rinke-Appel, J.5
Junke, N.6
Brimacombe, R.7
-
7
-
-
0028301199
-
Complete DNA sequence of yeast chromosome XI
-
Dujon, B., Alexandraki, D., Andre, B., Ansorge, W., Baladron, V., Ballesta, J.P., Banrevi, A., Bolle, P.A., Bolotin-Fukuhara, M., Bossier, P., et al. 1994. Complete DNA sequence of yeast chromosome XI. Nature 369: 371-378.
-
(1994)
Nature
, vol.369
, pp. 371-378
-
-
Dujon, B.1
Alexandraki, D.2
Andre, B.3
Ansorge, W.4
Baladron, V.5
Ballesta, J.P.6
Banrevi, A.7
Bolle, P.A.8
Bolotin-Fukuhara, M.9
Bossier, P.10
-
8
-
-
0024325455
-
Enhancer and silencerlike sites within the transcribed portion of a Ty2 transposable element of Saccharomyces cerevisiae
-
Farabaugh, P., Liao, X.-B., Belcourt, M., Zhao, H., Kapakos, J., and Clare, J. 1989. Enhancer and silencerlike sites within the transcribed portion of a Ty2 transposable element of Saccharomyces cerevisiae. Mol. Cell. Biol. 9: 4824-4834.
-
(1989)
Mol. Cell. Biol
, vol.9
, pp. 4824-4834
-
-
Farabaugh, P.1
Liao, X.-B.2
Belcourt, M.3
Zhao, H.4
Kapakos, J.5
Clare, J.6
-
9
-
-
0029870925
-
Programmed translational frameshifting
-
Farabaugh, P.J. 1996. Programmed translational frameshifting. Microbiol. Rev. 60: 103-134.
-
(1996)
Microbiol. Rev
, vol.60
, pp. 103-134
-
-
Farabaugh, P.J.1
-
10
-
-
0027250247
-
A novel programed frameshift expresses the POL3 gene of retrotransposon Ty3 of yeast: Frameshifting without tRNA slippage
-
Farabaugh, P.J., Zhao, H., and Vimaladithan, A. 1993. A novel programed frameshift expresses the POL3 gene of retrotransposon Ty3 of yeast: Frameshifting without tRNA slippage. Cell 74: 93-103.
-
(1993)
Cell
, vol.74
, pp. 93-103
-
-
Farabaugh, P.J.1
Zhao, H.2
Vimaladithan, A.3
-
11
-
-
0030814332
-
Inferring the conformation of RNA base pairs and triples from patterns of sequence variation
-
doi: 10.1093/nar/25.8.1559
-
Gautheret, D. and Gutell, R.R. 1997. Inferring the conformation of RNA base pairs and triples from patterns of sequence variation. Nucleic Acids Res. 25: 1559-1564. doi: 10.1093/nar/25.8.1559.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 1559-1564
-
-
Gautheret, D.1
Gutell, R.R.2
-
12
-
-
0026667889
-
Recoding: Reprogrammed genetic decoding
-
Gesteland, R., Weiss, R., and Atkins, J. 1992. Recoding: Reprogrammed genetic decoding. Science 257: 1640-1641.
-
(1992)
Science
, vol.257
, pp. 1640-1641
-
-
Gesteland, R.1
Weiss, R.2
Atkins, J.3
-
13
-
-
18744420805
-
Three-dimensional cryo-electron microscopy localization of EF2 in the Saccharomyces cerevisiae 80S ribosome at 17.5 A resolution
-
Gomez-Lorenzo, M.G., Spahn, C.M., Agrawal, R.K., Grassucci, R.A., Penczek, P., Chakraburtty, K., Ballesta, J.P., Lavandera, J.L., Garcia-Bustos, J.F., and Frank, J. 2000. Three-dimensional cryo-electron microscopy localization of EF2 in the Saccharomyces cerevisiae 80S ribosome at 17.5 A resolution. EMBO J. 19: 2710-2718.
-
(2000)
EMBO J
, vol.19
, pp. 2710-2718
-
-
Gomez-Lorenzo, M.G.1
Spahn, C.M.2
Agrawal, R.K.3
Grassucci, R.A.4
Penczek, P.5
Chakraburtty, K.6
Ballesta, J.P.7
Lavandera, J.L.8
Garcia-Bustos, J.F.9
Frank, J.10
-
14
-
-
0026000339
-
Mutations in 16S rRNA that affect UGA (stop codon)-directed translation termination
-
Goringer, H.U., Hijazi, K.A., Murgola, E.J., and Dahlberg, A.E. 1991. Mutations in 16S rRNA that affect UGA (stop codon)-directed translation termination. Proc. Natl. Acad. Sci. 88: 6603-6607.
-
(1991)
Proc. Natl. Acad. Sci
, vol.88
, pp. 6603-6607
-
-
Goringer, H.U.1
Hijazi, K.A.2
Murgola, E.J.3
Dahlberg, A.E.4
-
15
-
-
0002599277
-
Streptomycin and misreading of the genetic code
-
eds. M. Nomura, et al, pp, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y
-
Gorini, L. 1974. Streptomycin and misreading of the genetic code. In Ribosomes. (eds. M. Nomura, et al.), pp. 791-803. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1974)
Ribosomes
, pp. 791-803
-
-
Gorini, L.1
-
17
-
-
0842267211
-
Kinetic determinants of high-fidelity tRNA discrimination on the ribosome
-
Gromadski, K.B. and Rodnina, M.V. 2004. Kinetic determinants of high-fidelity tRNA discrimination on the ribosome. Mol. Cell 13: 191-200.
-
(2004)
Mol. Cell
, vol.13
, pp. 191-200
-
-
Gromadski, K.B.1
Rodnina, M.V.2
-
18
-
-
35548971503
-
-
Gutell, R.R. 1996. Comparative sequence analysis and the structure of 16S and 23S rRNA. In Structure, evolution, processing and function in protein biosynthesis. (eds. A.E. Dahlberg and R.A. Zimmermann), pp. 111-128. Ribosomal RNA, CRC Press, Boca Raton, FL.
-
Gutell, R.R. 1996. Comparative sequence analysis and the structure of 16S and 23S rRNA. In Structure, evolution, processing and function in protein biosynthesis. (eds. A.E. Dahlberg and R.A. Zimmermann), pp. 111-128. Ribosomal RNA, CRC Press, Boca Raton, FL.
-
-
-
-
19
-
-
0020959710
-
Studies on transformation of Escherichia coli with plasmids
-
Hanahan, D. 1983. Studies on transformation of Escherichia coli with plasmids. J. Mol. Biol. 166: 557-580.
-
(1983)
J. Mol. Biol
, vol.166
, pp. 557-580
-
-
Hanahan, D.1
-
20
-
-
0024039669
-
Evolution of the secondary structures and compensatory mutations of the ribosomal RNAs of Drosophila melanogaster
-
Hancock, J.M., Tautz, D., and Dover, G.A. 1988. Evolution of the secondary structures and compensatory mutations of the ribosomal RNAs of Drosophila melanogaster. Mol. Biol. Evol. 5: 393-414.
-
(1988)
Mol. Biol. Evol
, vol.5
, pp. 393-414
-
-
Hancock, J.M.1
Tautz, D.2
Dover, G.A.3
-
21
-
-
0035107140
-
Yeast frameshift suppressor mutations in the genes coding for transcription factor Mbf1p and ribosomal protein S3: Evidence for autoregulation of S3 synthesis
-
Hendrick, J.L., Wilson, P.G., Edelman, I.I., Sandbaken, M.G., Ursic, D., and Culbertson, M.R. 2001. Yeast frameshift suppressor mutations in the genes coding for transcription factor Mbf1p and ribosomal protein S3: Evidence for autoregulation of S3 synthesis. Genetics 157: 1141-1158.
-
(2001)
Genetics
, vol.157
, pp. 1141-1158
-
-
Hendrick, J.L.1
Wilson, P.G.2
Edelman, I.I.3
Sandbaken, M.G.4
Ursic, D.5
Culbertson, M.R.6
-
22
-
-
0000359208
-
Kinetic proofreading: A new mechanism for reducing errors in biosynthetic processes requiring high specificity
-
Hopfield, J. 1974. Kinetic proofreading: A new mechanism for reducing errors in biosynthetic processes requiring high specificity. Proc. Natl. Acad. Sci. 71: 4135-4139.
-
(1974)
Proc. Natl. Acad. Sci
, vol.71
, pp. 4135-4139
-
-
Hopfield, J.1
-
23
-
-
0029878720
-
VMD: Visual molecular dynamics
-
Humphrey, W., Dalke, A., and Schulten, K. 1996. VMD: Visual molecular dynamics. J. Mol. Graph. 14: 33-38.
-
(1996)
J. Mol. Graph
, vol.14
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
24
-
-
0020529962
-
Transformation of intact yeast cells treated with alkali cations
-
Ito, H., Fukuda, Y., Murata, K., and Kimura, A. 1983. Transformation of intact yeast cells treated with alkali cations. J. Bacteriol. 153: 163-168.
-
(1983)
J. Bacteriol
, vol.153
, pp. 163-168
-
-
Ito, H.1
Fukuda, Y.2
Murata, K.3
Kimura, A.4
-
25
-
-
0029040550
-
A second putative mRNA binding site on the Escherichia coli ribosome
-
Ivanov, I.G., Alexandrova, R.A., Dragulev, B.P., and AbouHaidar, M.G. 1995. A second putative mRNA binding site on the Escherichia coli ribosome. Gene 160: 75-79.
-
(1995)
Gene
, vol.160
, pp. 75-79
-
-
Ivanov, I.G.1
Alexandrova, R.A.2
Dragulev, B.P.3
AbouHaidar, M.G.4
-
26
-
-
0027373095
-
A rare tRNA-Arg(CCU) that regulates Ty1 element ribosomal frameshifting is essential for Ty1 retrotransposition in Saccharomyces cerevisiae
-
Kawakami, K., Pande, S., Faiola, B., Moore, D.P., Boeke, J.D., Farabaugh, P.J., Strathern, J.N., Nakamura, Y., and Garfinkel, D.J. 1993. A rare tRNA-Arg(CCU) that regulates Ty1 element ribosomal frameshifting is essential for Ty1 retrotransposition in Saccharomyces cerevisiae. Genetics 135: 309-320.
-
(1993)
Genetics
, vol.135
, pp. 309-320
-
-
Kawakami, K.1
Pande, S.2
Faiola, B.3
Moore, D.P.4
Boeke, J.D.5
Farabaugh, P.J.6
Strathern, J.N.7
Nakamura, Y.8
Garfinkel, D.J.9
-
27
-
-
0033752611
-
Translation during cold adaptation does not involve mRNA-rRNA base pairing through the downstream box
-
La Teana, A., Brandi, A., O'Connor, M., Freddi, S., and Pon, C.L. 2000. Translation during cold adaptation does not involve mRNA-rRNA base pairing through the downstream box. RNA 6: 1393-1402.
-
(2000)
RNA
, vol.6
, pp. 1393-1402
-
-
La Teana, A.1
Brandi, A.2
O'Connor, M.3
Freddi, S.4
Pon, C.L.5
-
28
-
-
0029402260
-
Upstream stimulators for recoding
-
Larsen, B., Peden, J., Matsufuji, S., Matsufuji, T., Brady, K., Maldonado, R., Wills, N.M., Fayet, O., Atkins, J.F., and Gesteland, R.F. 1995. Upstream stimulators for recoding. Biochem. Cell Biol. 73: 1123-1129.
-
(1995)
Biochem. Cell Biol
, vol.73
, pp. 1123-1129
-
-
Larsen, B.1
Peden, J.2
Matsufuji, S.3
Matsufuji, T.4
Brady, K.5
Maldonado, R.6
Wills, N.M.7
Fayet, O.8
Atkins, J.F.9
Gesteland, R.F.10
-
29
-
-
0032300804
-
Conserved geometrical basepairing patterns in RNA
-
Leontis, N.B. and Westhof, E. 1998. Conserved geometrical basepairing patterns in RNA. Q. Rev. Biophys. 31: 399-455.
-
(1998)
Q. Rev. Biophys
, vol.31
, pp. 399-455
-
-
Leontis, N.B.1
Westhof, E.2
-
30
-
-
0035256742
-
Programmed +1 frameshifting stimulated by complementarity between a downstream mRNA sequence and an error correcting region of rRNA
-
Li, Z., Stahl, G., and Farabaugh, P.J. 2001. Programmed +1 frameshifting stimulated by complementarity between a downstream mRNA sequence and an error correcting region of rRNA. RNA 7: 275-284.
-
(2001)
RNA
, vol.7
, pp. 275-284
-
-
Li, Z.1
Stahl, G.2
Farabaugh, P.J.3
-
31
-
-
0027988206
-
Mutations in helix 34 of Escherichia coli 16 S ribosomal RNA have multiple effects on ribosome function and synthesis
-
Moine, H. and Dahlberg, A.E. 1994. Mutations in helix 34 of Escherichia coli 16 S ribosomal RNA have multiple effects on ribosome function and synthesis. J. Mol. Biol. 243: 402-412.
-
(1994)
J. Mol. Biol
, vol.243
, pp. 402-412
-
-
Moine, H.1
Dahlberg, A.E.2
-
32
-
-
0035026057
-
Evidence against an Interaction between the mRNA downstream box and 16S rRNA in translation initiation
-
Moll, I., Huber, M., Grill, S., Sairafi, P., Mueller, F., Brimacombe, R., Londei, P., and Blasi, U. 2001. Evidence against an Interaction between the mRNA downstream box and 16S rRNA in translation initiation. J. Bacteriol. 183: 3499-3505.
-
(2001)
J. Bacteriol
, vol.183
, pp. 3499-3505
-
-
Moll, I.1
Huber, M.2
Grill, S.3
Sairafi, P.4
Mueller, F.5
Brimacombe, R.6
Londei, P.7
Blasi, U.8
-
33
-
-
0842267214
-
Reprogrammed genetic decoding in cellular gene expression
-
Namy, O., Rousset, J.P., Napthine, S., and Brierley, I. 2004. Reprogrammed genetic decoding in cellular gene expression. Mol. Cell 13: 157-168.
-
(2004)
Mol. Cell
, vol.13
, pp. 157-168
-
-
Namy, O.1
Rousset, J.P.2
Napthine, S.3
Brierley, I.4
-
35
-
-
0016793283
-
Kinetic amplification of enzyme discrimination
-
Ninio, J. 1975. Kinetic amplification of enzyme discrimination. Biochimie 57: 587-595.
-
(1975)
Biochimie
, vol.57
, pp. 587-595
-
-
Ninio, J.1
-
36
-
-
0029402232
-
Genetic probes of ribosomal RNA function
-
O'Connor, M., Brunelli, C.A., Firpo, M.A., Gregory, S.T., Lieberman, K.R., Lodmell, J.S., Moine, H., Van Ryk, D.I., and Dahlberg, A.E. 1995. Genetic probes of ribosomal RNA function. Biochem. Cell Biol. 73: 859-868.
-
(1995)
Biochem. Cell Biol
, vol.73
, pp. 859-868
-
-
O'Connor, M.1
Brunelli, C.A.2
Firpo, M.A.3
Gregory, S.T.4
Lieberman, K.R.5
Lodmell, J.S.6
Moine, H.7
Van Ryk, D.I.8
Dahlberg, A.E.9
-
37
-
-
0030763966
-
Decoding fidelity at the ribosomal A and P sites: Influence of mutations in three different regions of the decoding domain in 16S rRNA
-
doi: 10.1093/nar/25.6.1185
-
O'Connor, M., Thomas, C.L., Zimmermann, R.A., and Dahlberg, A.E. 1997. Decoding fidelity at the ribosomal A and P sites: Influence of mutations in three different regions of the decoding domain in 16S rRNA. Nucleic Acids Res. 25: 1185-1193. doi: 10.1093/nar/25.6.1185.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 1185-1193
-
-
O'Connor, M.1
Thomas, C.L.2
Zimmermann, R.A.3
Dahlberg, A.E.4
-
38
-
-
0033529890
-
Enhancement of translation by the downstream box does not involve base pairing of mRNA with the penultimate stem sequence of 16S rRNA
-
O'Connor, M., Asai, T., Squires, C.L., and Dahlberg, A.E. 1999. Enhancement of translation by the downstream box does not involve base pairing of mRNA with the penultimate stem sequence of 16S rRNA. Proc. Natl. Acad. Sci. 96: 8973-8978.
-
(1999)
Proc. Natl. Acad. Sci
, vol.96
, pp. 8973-8978
-
-
O'Connor, M.1
Asai, T.2
Squires, C.L.3
Dahlberg, A.E.4
-
39
-
-
0038403669
-
Insights into the decoding mechanism from recent ribosome structures
-
Ogle, J.M., Carter, A.P., and Ramakrishnan, V. 2003. Insights into the decoding mechanism from recent ribosome structures. Trends Biochem. Sci. 28: 259-266.
-
(2003)
Trends Biochem. Sci
, vol.28
, pp. 259-266
-
-
Ogle, J.M.1
Carter, A.P.2
Ramakrishnan, V.3
-
40
-
-
0024359013
-
A novel sequence element derived from bacteriophage T7 mRNA acts as an enhancer of translation of the lacZ gene in Escherichia coli
-
Olins, P.O. and Rangwala, S.H. 1989. A novel sequence element derived from bacteriophage T7 mRNA acts as an enhancer of translation of the lacZ gene in Escherichia coli. J. Biol. Chem. 264: 16973-16976.
-
(1989)
J. Biol. Chem
, vol.264
, pp. 16973-16976
-
-
Olins, P.O.1
Rangwala, S.H.2
-
41
-
-
0028936155
-
Pulling the ribosome out of frame +1 at a programmed frameshift site by cognate binding of aminoacyl-tRNA
-
Pande, S., Vimaladithan, A., Zhao, H., and Farabaugh, P.J. 1995. Pulling the ribosome out of frame +1 at a programmed frameshift site by cognate binding of aminoacyl-tRNA. Mol. Cell. Biol. 15: 298-304.
-
(1995)
Mol. Cell. Biol
, vol.15
, pp. 298-304
-
-
Pande, S.1
Vimaladithan, A.2
Zhao, H.3
Farabaugh, P.J.4
-
42
-
-
0024722501
-
Errors and alternatives in reading the universal genetic code
-
Parker, J. 1989. Errors and alternatives in reading the universal genetic code. Microbiol. Rev. 53: 273-298.
-
(1989)
Microbiol. Rev
, vol.53
, pp. 273-298
-
-
Parker, J.1
-
43
-
-
0023663370
-
Recognition of the TACTAAC box during mRNA splicing in yeast involves base pairing to the U2-like snRNA
-
Parker, R., Siliciano, P.G., and Guthrie, C. 1987. Recognition of the TACTAAC box during mRNA splicing in yeast involves base pairing to the U2-like snRNA. Cell 49: 229-239.
-
(1987)
Cell
, vol.49
, pp. 229-239
-
-
Parker, R.1
Siliciano, P.G.2
Guthrie, C.3
-
44
-
-
0025012472
-
Dominant lethal mutations in a conserved loop in 16S rRNA
-
Powers, T. and Noller, H.F. 1990. Dominant lethal mutations in a conserved loop in 16S rRNA. Proc. Natl. Acad. Sci. 87: 1042-1046.
-
(1990)
Proc. Natl. Acad. Sci
, vol.87
, pp. 1042-1046
-
-
Powers, T.1
Noller, H.F.2
-
45
-
-
0029811326
-
Downstream boxanti-downstream box interactions are dispensable for translation initiation of leaderless mRNAs
-
Resch, A., Tedin, K., Grundling, A., Mundlein, A., and Blasi, U. 1996. Downstream boxanti-downstream box interactions are dispensable for translation initiation of leaderless mRNAs. EMBO J. 15: 4740-4748.
-
(1996)
EMBO J
, vol.15
, pp. 4740-4748
-
-
Resch, A.1
Tedin, K.2
Grundling, A.3
Mundlein, A.4
Blasi, U.5
-
46
-
-
0027214113
-
Site-directed cross-linking of mRNA analogues to 16S ribosomal RNA; a complete scan of cross-links from all positions between "+1" and "+16" on the mRNA, downstream from the decoding site
-
doi: 10.1093/nar/21.12. 2853
-
Rinke-Appel, J., Junke, N., Brimacombe, R., Dukudovskaya, S., Dontsova, O., and Bogdanov, A. 1993. Site-directed cross-linking of mRNA analogues to 16S ribosomal RNA; a complete scan of cross-links from all positions between "+1" and "+16" on the mRNA, downstream from the decoding site. Nucleic Acids Res. 21: 2853-2859. doi: 10.1093/nar/21.12. 2853.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 2853-2859
-
-
Rinke-Appel, J.1
Junke, N.2
Brimacombe, R.3
Dukudovskaya, S.4
Dontsova, O.5
Bogdanov, A.6
-
47
-
-
14544285163
-
Recognition and selection of tRNA in translation
-
Rodnina, M.V., Gromadski, K.B., Kothe, U., and Wieden, H.J. 2005. Recognition and selection of tRNA in translation. FEBS Lett. 579: 938-942.
-
(2005)
FEBS Lett
, vol.579
, pp. 938-942
-
-
Rodnina, M.V.1
Gromadski, K.B.2
Kothe, U.3
Wieden, H.J.4
-
48
-
-
4243732080
-
The 530 loop of 16S ribosomal RNA: Each base change confers its own phenotype
-
Santer, U., Cekleniak, J., and Santer, M. 1993. The 530 loop of 16S ribosomal RNA: Each base change confers its own phenotype. Mol. Biol. Cell 4: 420a.
-
(1993)
Mol. Biol. Cell
, vol.4
-
-
Santer, U.1
Cekleniak, J.2
Santer, M.3
-
49
-
-
0023042748
-
Compensatory mutations suggest that base-pairing with a small nuclear RNA is required to form the 3′ end of H3 messenger RNA
-
Schaufele, F., Gilmartin, G.M., Bannwarth, W., and Birnstiel, M.L. 1986. Compensatory mutations suggest that base-pairing with a small nuclear RNA is required to form the 3′ end of H3 messenger RNA. Nature 323: 777-781.
-
(1986)
Nature
, vol.323
, pp. 777-781
-
-
Schaufele, F.1
Gilmartin, G.M.2
Bannwarth, W.3
Birnstiel, M.L.4
-
50
-
-
27644491082
-
Structures of the bacterial ribosome at 3.5 A resolution
-
Schuwirth, B.S., Borovinskaya, M.A., Hau, C.W., Zhang, W., Vila-Sanjurjo, A., Holton, J.M., and Cate, J.H. 2005. Structures of the bacterial ribosome at 3.5 A resolution. Science 310: 827-834.
-
(2005)
Science
, vol.310
, pp. 827-834
-
-
Schuwirth, B.S.1
Borovinskaya, M.A.2
Hau, C.W.3
Zhang, W.4
Vila-Sanjurjo, A.5
Holton, J.M.6
Cate, J.H.7
-
51
-
-
33749354360
-
Structure of the 70S ribosome complexed with mRNA and tRNA
-
Selmer, M., Dunham, C.M., Murphy, F.V.T., Weixlbaumer, A., Petry, S., Kelley, A.C., Weir, J.R., and Ramakrishnan, V. 2006. Structure of the 70S ribosome complexed with mRNA and tRNA. Science 313: 1935-1942.
-
(2006)
Science
, vol.313
, pp. 1935-1942
-
-
Selmer, M.1
Dunham, C.M.2
Murphy, F.V.T.3
Weixlbaumer, A.4
Petry, S.5
Kelley, A.C.6
Weir, J.R.7
Ramakrishnan, V.8
-
52
-
-
0016154301
-
The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to nonsense triplets and ribosome binding sites
-
Shine, J. and Dalgarno, L. 1974. The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to nonsense triplets and ribosome binding sites. Proc. Natl. Acad. Sci. 71: 1342-1346.
-
(1974)
Proc. Natl. Acad. Sci
, vol.71
, pp. 1342-1346
-
-
Shine, J.1
Dalgarno, L.2
-
53
-
-
0035798380
-
Structure of the 80S ribosome from Saccharomyces cerevisiae-tRNA-ribosome and subunitsubunit interactions
-
Spahn, C.M., Beckmann, R., Eswar, N., Penczek, P.A., Sali, A., Blobel, G., and Frank, J. 2001. Structure of the 80S ribosome from Saccharomyces cerevisiae-tRNA-ribosome and subunitsubunit interactions. Cell 107: 373-386.
-
(2001)
Cell
, vol.107
, pp. 373-386
-
-
Spahn, C.M.1
Beckmann, R.2
Eswar, N.3
Penczek, P.A.4
Sali, A.5
Blobel, G.6
Frank, J.7
-
54
-
-
1842576803
-
Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation
-
Spahn, C.M., Gomez-Lorenzo, M.G., Grassucci, R.A., Jorgensen, R., Andersen, G.R., Beckmann, R., Penczek, P.A., Ballesta, J.P., and Frank, J. 2004. Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation. EMBO J. 23: 1008-1019.
-
(2004)
EMBO J
, vol.23
, pp. 1008-1019
-
-
Spahn, C.M.1
Gomez-Lorenzo, M.G.2
Grassucci, R.A.3
Jorgensen, R.4
Andersen, G.R.5
Beckmann, R.6
Penczek, P.A.7
Ballesta, J.P.8
Frank, J.9
-
55
-
-
0036534459
-
Ribosome structure: Revisiting the connection between translational accuracy and unconventional decoding
-
Stahl, G., McCarty, G.P., and Farabaugh, P.J. 2002. Ribosome structure: Revisiting the connection between translational accuracy and unconventional decoding. Trends Biochem. Sci. 27: 178-183.
-
(2002)
Trends Biochem. Sci
, vol.27
, pp. 178-183
-
-
Stahl, G.1
McCarty, G.P.2
Farabaugh, P.J.3
-
56
-
-
0030770467
-
Visualization of elongation factor Tu on the Escherichia coli ribosome
-
Stark, H., Rodnina, M.V., Rinke-Appel, J., Brimacombe, R., Wintermeyer, W., and van Heel, M. 1997. Visualization of elongation factor Tu on the Escherichia coli ribosome. Nature 389: 403-406.
-
(1997)
Nature
, vol.389
, pp. 403-406
-
-
Stark, H.1
Rodnina, M.V.2
Rinke-Appel, J.3
Brimacombe, R.4
Wintermeyer, W.5
van Heel, M.6
-
57
-
-
0014993118
-
Ribosomal proteins. XIX. Altered S5 ribosomal protein in an Escherichia coli revertant from streptomycin dependence to independence
-
Stoffler, G., Deusser, E., Wittmann, H.G., and Apirion, D. 1971. Ribosomal proteins. XIX. Altered S5 ribosomal protein in an Escherichia coli revertant from streptomycin dependence to independence. Mol. Gen. Genet. 111: 334-341.
-
(1971)
Mol. Gen. Genet
, vol.111
, pp. 334-341
-
-
Stoffler, G.1
Deusser, E.2
Wittmann, H.G.3
Apirion, D.4
-
58
-
-
0033380022
-
Nearcognate peptidyl-tRNAs promote +1 programmed translational frameshifting in yeast
-
Sundararajan, A., Michaud, W.A., Qian, Q., Stahl, G., and Farabaugh, P.J. 1999. Nearcognate peptidyl-tRNAs promote +1 programmed translational frameshifting in yeast. Mol. Cell 4: 1005-1015.
-
(1999)
Mol. Cell
, vol.4
, pp. 1005-1015
-
-
Sundararajan, A.1
Michaud, W.A.2
Qian, Q.3
Stahl, G.4
Farabaugh, P.J.5
-
59
-
-
11844292767
-
mRNA helicase activity of the ribosome
-
Takyar, S., Hickerson, R.P., and Noller, H.F. 2005. mRNA helicase activity of the ribosome. Cell 120: 49-58.
-
(2005)
Cell
, vol.120
, pp. 49-58
-
-
Takyar, S.1
Hickerson, R.P.2
Noller, H.F.3
-
60
-
-
33947711963
-
An mRNA sequence derived from the yeast EST3 gene stimulates programmed +1 translational frameshifting
-
Taliaferro, D. and Farabaugh, P.J. 2007a. An mRNA sequence derived from the yeast EST3 gene stimulates programmed +1 translational frameshifting. RNA 13: 606-613.
-
(2007)
RNA
, vol.13
, pp. 606-613
-
-
Taliaferro, D.1
Farabaugh, P.J.2
-
61
-
-
34447525137
-
Testing constraints on rRNA bases that make nonsequence-specific contacts with the codonanticodon complex in the ribosomal A site
-
Taliaferro, D. and Farabaugh, P.J. 2007b. Testing constraints on rRNA bases that make nonsequence-specific contacts with the codonanticodon complex in the ribosomal A site. RNA 13: 1279-1286.
-
(2007)
RNA
, vol.13
, pp. 1279-1286
-
-
Taliaferro, D.1
Farabaugh, P.J.2
-
62
-
-
0024598211
-
An additional ribosomebinding site on mRNA of highly expressed genes and a bifunctional site on the colicin fragment of 16S rRNA from Escherichia coli: Important determinants of the efficiency of translationinitiation
-
Thanaraj, T.A. and Pandit, M.W. 1989. An additional ribosomebinding site on mRNA of highly expressed genes and a bifunctional site on the colicin fragment of 16S rRNA from Escherichia coli: Important determinants of the efficiency of translationinitiation. Nucleic Acids Res. 17: 2973-2985.
-
(1989)
Nucleic Acids Res
, vol.17
, pp. 2973-2985
-
-
Thanaraj, T.A.1
Pandit, M.W.2
-
63
-
-
0023977682
-
EFTu provides an internal kinetic standard for translational accuracy
-
Thompson, R. 1988. EFTu provides an internal kinetic standard for translational accuracy. Trends Biochem. Sci. 13: 91-93.
-
(1988)
Trends Biochem. Sci
, vol.13
, pp. 91-93
-
-
Thompson, R.1
-
64
-
-
0019395516
-
2+ concentration, polyamines, streptomycin, and mutations in ribosomal proteins on the accuracy of the two-step selection of aminoacyl-tRNAs in protein biosynthesis
-
2+ concentration, polyamines, streptomycin, and mutations in ribosomal proteins on the accuracy of the two-step selection of aminoacyl-tRNAs in protein biosynthesis. J. Biol. Chem. 256: 6676-6681.
-
(1981)
J. Biol. Chem
, vol.256
, pp. 6676-6681
-
-
Thompson, R.C.1
Dix, D.B.2
Gerson, R.B.3
Karim, A.M.4
-
65
-
-
0032514674
-
rRNA complementarity within mRNAs: A possible basis for mRNA-ribosome interactions and translational control
-
Tranque, P., Hu, M.C., Edelman, G.M., and Mauro, V.P. 1998. rRNA complementarity within mRNAs: A possible basis for mRNA-ribosome interactions and translational control. Proc. Natl. Acad. Sci. 95: 12238-12243.
-
(1998)
Proc. Natl. Acad. Sci
, vol.95
, pp. 12238-12243
-
-
Tranque, P.1
Hu, M.C.2
Edelman, G.M.3
Mauro, V.P.4
-
66
-
-
0024004922
-
Reading frame switch caused by base-pair formation between the 3′ end of 16S rRNA and the mRNA during elongation of protein synthesis in Escherichia coli
-
Weiss, R., Dunn, D., Dahlberg, A., Atkins, J., and Gesteland, R. 1988. Reading frame switch caused by base-pair formation between the 3′ end of 16S rRNA and the mRNA during elongation of protein synthesis in Escherichia coli. EMBO J. 7: 1503-1507.
-
(1988)
EMBO J
, vol.7
, pp. 1503-1507
-
-
Weiss, R.1
Dunn, D.2
Dahlberg, A.3
Atkins, J.4
Gesteland, R.5
-
67
-
-
0034653488
-
RNA folding: Beyond Watson-Crick pairs
-
Westhof, E. and Fritsch, V. 2000. RNA folding: Beyond Watson-Crick pairs. Struct. Fold. Des. 8: R55-R65.
-
(2000)
Struct. Fold. Des
, vol.8
-
-
Westhof, E.1
Fritsch, V.2
-
68
-
-
8744223564
-
Mechanisms of elongation on the ribosome: Dynamics of a macromolecular machine
-
Wintermeyer, W., Peske, F., Beringer, M., Gromadski, K.B., Savelsbergh, A., and Rodnina, M.V. 2004. Mechanisms of elongation on the ribosome: Dynamics of a macromolecular machine. Biochem. Soc. Trans. 32: 733-737.
-
(2004)
Biochem. Soc. Trans
, vol.32
, pp. 733-737
-
-
Wintermeyer, W.1
Peske, F.2
Beringer, M.3
Gromadski, K.B.4
Savelsbergh, A.5
Rodnina, M.V.6
-
69
-
-
0035958587
-
The path of messenger RNA through the ribosome
-
Yusupova, G.Z., Yusupov, M.M., Cate, J.H., and Noller, H.F. 2001. The path of messenger RNA through the ribosome. Cell 106: 233-241.
-
(2001)
Cell
, vol.106
, pp. 233-241
-
-
Yusupova, G.Z.1
Yusupov, M.M.2
Cate, J.H.3
Noller, H.F.4
-
70
-
-
33751103912
-
Structural basis for messenger RNA movement on the ribosome
-
Yusupova, G., Jenner, L., Rees, B., Moras, D., and Yusupov, M. 2006. Structural basis for messenger RNA movement on the ribosome. Nature 444: 391-394.
-
(2006)
Nature
, vol.444
, pp. 391-394
-
-
Yusupova, G.1
Jenner, L.2
Rees, B.3
Moras, D.4
Yusupov, M.5
-
71
-
-
0022550119
-
A compensatory base change in U1 snRNA suppresses a 5′ splice site mutation
-
Zhuang, Y. and Weiner, A.M. 1986. A compensatory base change in U1 snRNA suppresses a 5′ splice site mutation. Cell 46: 827-835.
-
(1986)
Cell
, vol.46
, pp. 827-835
-
-
Zhuang, Y.1
Weiner, A.M.2
|