Intra-genotypic resolution of African swine fever viruses from an East African domestic pig cycle: A combined p72-CVR approach

Virus Genes

Volumn 35, Issue 3, 2007, Pages 729-735

  Lubisi, Baratang A ^a,b   Bastos, Armanda Duarte Slager ^b   Dwarka, Rahana M ^a   Vosloo, Wilna ^a,b  

^a ONDERSTEPOORT VETERINARY INSTITUTE   (South Africa)

^b UNIVERSITY OF PRETORIA   (South Africa)

Author keywords

African swine fever; Central variable region; Convergent evolution; Intra genotypic recombination; p72 genotype VIII

Indexed keywords

AMINO ACID;

AFRICA; ARTICLE; CELL LINEAGE; EPIDEMIC; GENE SEQUENCE; GENETIC RECOMBINATION; GENETIC VARIABILITY; GENOTYPE; MALAWI; MOLECULAR EVOLUTION; MOZAMBIQUE; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PESTIVIRUS; PHYLOGENY; PRIORITY JOURNAL; TAXONOMY; ZAMBIA; ZIMBABWE;

AFRICA, EASTERN; AFRICAN SWINE FEVER; AFRICAN SWINE FEVER VIRUS; ANIMALS; CLUSTER ANALYSIS; DISEASE OUTBREAKS; EVOLUTION, MOLECULAR; GENOTYPE; GEOGRAPHY; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMORPHISM, GENETIC; RECOMBINATION, GENETIC; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; SUS SCROFA; VIRAL PROTEINS;

AFRICAN SWINE FEVER VIRUS; SUIDAE; SUS SCROFA DOMESTICA;

EID: 35548939086     PISSN: 09208569     EISSN: 1572994X     Source Type: Journal    
DOI: 10.1007/s11262-007-0148-2     Document Type: Article

References (17)

1. L.K. Dixon, J.M. Escribano, C. Martins, D.L. Rock, M.L. Salas, P.J. Wilkinson, in Virus taxonomy: VIIIth report of the International Committee on Taxonomy of Viruses, ed. by C.M. Fauquet, M.A. Mayo, J. Maniloff, U. Desselberger, L.A. Ball (Elsevier/Academic Press, London, 2005) pp. 135-143
2. M.-L. Penrith, G.R. Thomson, A.D.S. Bastos, in Infectious diseases of livestock, ed. By J.A.W. Coetzer, R.C. Tustin. (Oxford University Press, Cape Town, 2004) pp. 1087-1119
3. M.L. Penrith, C. Lopes Pereira, M.M.R. Lopes da Silva, C. Quembo, A. Nhamusso, J.B.J. Onderstepoort, J. Vet. Res. 2007 (in press)
4. B.A. Lubisi, A.D.S. Bastos, R. Dwarka, W. Vosloo, Arch. Virol. 150, 2439 (2005)
5. K.J. Sumption, G.H. Hutchings, P.J. Wilkinson, L.K. Dixon, J. Gen. Virol. 71, 2331 (1990)
6. P.M. Irusta, M.V. Borca, G.F. Kutish, Z. Lu, E. Caler, C. Carrillo, D. Rock, Virology 220, 20 (1996)
7. R.J. Yáñez, J.M. Rodríguez, M.L. Nogal, L. Yuste, C. Enríquez, H.F. Rodriguez, E. Viñuela, Virology 208, 249 (1995)
8. R.J. Nix, C. Gallardo, G. Hutchings, E. Blanco, L.K. Dixon, Arch. Virol. 2006 (in press)
9. A.D.S. Bastos, M.-L. Penrith, F. Macome, F. Pinto, G.R. Thomson, Vet. Micro. 103, 169 (2004)
10. S.B. Phologane, A.D.S. Bastos, M.-L. Penrith, Virus Genes 31, 357 (2005)
11. C.I. Boshoff, A.D.S. Bastos, L. Gerber, W. Vosloo, Vet. Microbiol. 2007 (in press)
12. A.D.S. Bastos, M.-L. Penrith, C. Crucière, J. Edrich, G. Hutchings, F. Roger, E. Couacy-Hymann, G.R. Thomson, Arch. Virol. 148, 693 (2003)
13. C. McCarthy, Chromas 1.43, School of Biomolecular and Biomedical Science, Faculty of Science and Technology, Griffith University, Brisbane, Queensland, Australia (1996)
14. E.H. Harley, DAPSA, DNA and protein sequence analysis. version 4.91 (Department of Chemical Pathology, University of Cape Town, 2001)
15. M.P. Simmons, H. Ochoterena, Syst. Biol. 49, 369 (2000)
16. D.L. Swofford, PAUP*. Phylogenetic analysis using parsimony (*and other methods). version 4.10 (Sinauer Associates, MA, USA Inc., 2003)
17. J.S. Farris, M. Källersjö, A.G. Kluge, C. Bult, Cladistics 10, 315 (1994)